RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 AKR1B1P15121 316 aa24.25■■□□□ 1.47
TRIM54-202ENST00000380075 ZNF710Q8N1W2 664 aa24.25■■□□□ 1.47
TRIM54-202ENST00000380075 STAMQ92783 540 aa24.25■■□□□ 1.47
TRIM54-202ENST00000380075 BAG1Q99933 345 aaPredicted RBP24.25■■□□□ 1.47
TRIM54-202ENST00000380075 CTNND2Q9UQB3 1225 aa24.25■■□□□ 1.47
TRIM54-202ENST00000380075 GOLGA6L9A6NEM1 432 aa24.25■■□□□ 1.47
TRIM54-202ENST00000380075 CACNB3P54284 484 aa24.25■■□□□ 1.47
TRIM54-202ENST00000380075 STX17P56962 302 aa24.25■■□□□ 1.47
TRIM54-202ENST00000380075 NAALADL2Q58DX5 795 aa24.25■■□□□ 1.47
TRIM54-202ENST00000380075 RASGRP2Q7LDG7 609 aa24.25■■□□□ 1.47
TRIM54-202ENST00000380075 LDHDQ86WU2 507 aa24.25■■□□□ 1.47
TRIM54-202ENST00000380075 TC2NQ8N9U0 490 aa24.25■■□□□ 1.47
TRIM54-202ENST00000380075 ANKRD20A12PQ8NF67 263 aa24.25■■□□□ 1.47
TRIM54-202ENST00000380075 ZC3H15Q8WU90 426 aaKnown RBP24.25■■□□□ 1.47
TRIM54-202ENST00000380075 ANKRD7Q92527 254 aa24.25■■□□□ 1.47
TRIM54-202ENST00000380075 CCDC17Q96LX7 622 aa24.25■■□□□ 1.47
TRIM54-202ENST00000380075 CPVLQ9H3G5 476 aa24.25■■□□□ 1.47
TRIM54-202ENST00000380075 KBTBD4Q9NVX7 518 aa24.25■■□□□ 1.47
TRIM54-202ENST00000380075 ZNF70Q9UC06 446 aaPredicted RBP24.25■■□□□ 1.47
TRIM54-202ENST00000380075 PGAP2Q9UHJ9 254 aa24.25■■□□□ 1.47
TRIM54-202ENST00000380075 SPDYE2Q495Y8 402 aa24.24■■□□□ 1.47
TRIM54-202ENST00000380075 SMYD4Q8IYR2 804 aaPredicted RBP24.24■■□□□ 1.47
TRIM54-202ENST00000380075 LIMA1Q9UHB6 759 aaKnown RBP24.24■■□□□ 1.47
TRIM54-202ENST00000380075 LRRC10BA6NIK2 292 aa24.23■■□□□ 1.47
TRIM54-202ENST00000380075 CCNT1O60563 726 aaKnown RBP24.23■■□□□ 1.47
TRIM54-202ENST00000380075 LETM2Q2VYF4 491 aa24.23■■□□□ 1.47
TRIM54-202ENST00000380075 PANX2Q96RD6 677 aa24.23■■□□□ 1.47
TRIM54-202ENST00000380075 VEZTQ9HBM0 779 aa24.23■■□□□ 1.47
TRIM54-202ENST00000380075 VAT1LQ9HCJ6 419 aa24.23■■□□□ 1.47
TRIM54-202ENST00000380075 ITIH6Q6UXX5 1313 aa24.23■■□□□ 1.47
TRIM54-202ENST00000380075 SHMT1P34896 483 aa24.23■■□□□ 1.47
TRIM54-202ENST00000380075 PBX1P40424 430 aa24.23■■□□□ 1.47
TRIM54-202ENST00000380075 ZNF543Q08ER8 600 aa24.23■■□□□ 1.47
TRIM54-202ENST00000380075 GPATCH4Q5T3I0 446 aaKnown RBP24.23■■□□□ 1.47
TRIM54-202ENST00000380075 MAP1SQ66K74 1059 aaPredicted RBP24.23■■□□□ 1.47
TRIM54-202ENST00000380075 TSC1Q92574 1164 aa24.23■■□□□ 1.47
TRIM54-202ENST00000380075 UBA5Q9GZZ9 404 aa24.23■■□□□ 1.47
TRIM54-202ENST00000380075 MYH8P13535 1937 aa24.22■■□□□ 1.47
TRIM54-202ENST00000380075 CDC25AP30304 524 aa24.22■■□□□ 1.47
TRIM54-202ENST00000380075 ADCY7P51828 1080 aa24.22■■□□□ 1.47
TRIM54-202ENST00000380075 CABP7Q86V35 215 aa24.22■■□□□ 1.47
TRIM54-202ENST00000380075 NAA15Q9BXJ9 866 aaKnown RBP24.22■■□□□ 1.47
TRIM54-202ENST00000380075 DHX36Q9H2U1 1008 aaKnown RBP24.22■■□□□ 1.47
TRIM54-202ENST00000380075 AKR1B15C9JRZ8 316 aaPredicted RBP24.22■■□□□ 1.47
TRIM54-202ENST00000380075 ETF1P62495 437 aaKnown RBP24.22■■□□□ 1.47
TRIM54-202ENST00000380075 STIM1Q13586 685 aa24.22■■□□□ 1.47
TRIM54-202ENST00000380075 TBCKQ8TEA7 893 aa24.22■■□□□ 1.47
TRIM54-202ENST00000380075 NELFBQ8WX92 580 aa24.22■■□□□ 1.47
TRIM54-202ENST00000380075 CCDC47Q96A33 483 aaKnown RBP24.22■■□□□ 1.47
TRIM54-202ENST00000380075 DCPSQ96C86 337 aaKnown RBP24.22■■□□□ 1.47
TRIM54-202ENST00000380075 PHLPP2Q6ZVD8 1323 aa24.21■■□□□ 1.47
TRIM54-202ENST00000380075 RHOBTB3O94955 611 aa24.21■■□□□ 1.47
TRIM54-202ENST00000380075 PPFIBP1Q86W92 1011 aa24.21■■□□□ 1.47
TRIM54-202ENST00000380075 LRRC47Q8N1G4 583 aaKnown RBP24.21■■□□□ 1.47
TRIM54-202ENST00000380075 FRMPD2Q68DX3 1309 aaPredicted RBP24.21■■□□□ 1.47
TRIM54-202ENST00000380075 PNMA6FA0A0J9YX94 578 aa24.2■■□□□ 1.46
TRIM54-202ENST00000380075 TCP10L2B9ZVM9 353 aa24.2■■□□□ 1.46
TRIM54-202ENST00000380075 PPP1R2P41236 205 aa24.2■■□□□ 1.46
TRIM54-202ENST00000380075 NFIAQ12857 509 aa24.2■■□□□ 1.46
TRIM54-202ENST00000380075 ADSSL1Q8N142 457 aa24.2■■□□□ 1.46
TRIM54-202ENST00000380075 L2HGDHQ9H9P8 463 aa24.2■■□□□ 1.46
TRIM54-202ENST00000380075 GREB1LQ9C091 1923 aaPredicted RBP24.2■■□□□ 1.46
TRIM54-202ENST00000380075 PP2D1A8MPX8 630 aa24.2■■□□□ 1.46
TRIM54-202ENST00000380075 NPM3O75607 178 aaKnown RBP24.2■■□□□ 1.46
TRIM54-202ENST00000380075 DLK2Q6UY11 383 aa24.2■■□□□ 1.46
TRIM54-202ENST00000380075 IGSF22Q8N9C0 903 aa24.2■■□□□ 1.46
TRIM54-202ENST00000380075 CCDC51Q96ER9 411 aa24.2■■□□□ 1.46
TRIM54-202ENST00000380075 TOMM70O94826 608 aa24.19■■□□□ 1.46
TRIM54-202ENST00000380075 AMPD3Q01432 767 aa24.19■■□□□ 1.46
TRIM54-202ENST00000380075 CHADLQ6NUI6 762 aa24.19■■□□□ 1.46
TRIM54-202ENST00000380075 REXO1L1PQ8IX06 675 aa24.19■■□□□ 1.46
TRIM54-202ENST00000380075 ERO1AQ96HE7 468 aa24.19■■□□□ 1.46
TRIM54-202ENST00000380075 PPP2R2CQ9Y2T4 447 aa24.19■■□□□ 1.46
TRIM54-202ENST00000380075 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.19■■□□□ 1.46
TRIM54-202ENST00000380075 PITPNM2Q9BZ72 1349 aa24.18■■□□□ 1.46
TRIM54-202ENST00000380075 TEX33O43247 280 aa24.18■■□□□ 1.46
TRIM54-202ENST00000380075 TPM1P09493 284 aa24.18■■□□□ 1.46
TRIM54-202ENST00000380075 PRCPP42785 496 aa24.18■■□□□ 1.46
TRIM54-202ENST00000380075 NCBP1Q09161 790 aaKnown RBP24.18■■□□□ 1.46
TRIM54-202ENST00000380075 TRIM14Q14142 442 aa24.18■■□□□ 1.46
TRIM54-202ENST00000380075 KRT26Q7Z3Y9 468 aa24.18■■□□□ 1.46
TRIM54-202ENST00000380075 GLIS2Q9BZE0 524 aaPredicted RBP24.18■■□□□ 1.46
TRIM54-202ENST00000380075 TMOD2Q9NZR1 351 aa24.18■■□□□ 1.46
TRIM54-202ENST00000380075 BIN2Q9UBW5 565 aaPredicted RBP24.18■■□□□ 1.46
TRIM54-202ENST00000380075 ADM5C9JUS6 153 aa24.18■■□□□ 1.46
TRIM54-202ENST00000380075 KLRC4O43908 158 aa24.18■■□□□ 1.46
TRIM54-202ENST00000380075 ADKP55263 362 aaKnown RBP24.18■■□□□ 1.46
TRIM54-202ENST00000380075 GOLGA8FQ08AF8 430 aa24.18■■□□□ 1.46
TRIM54-202ENST00000380075 GOLGA8DPQ0D2H9 430 aa24.18■■□□□ 1.46
TRIM54-202ENST00000380075 KRT31Q15323 416 aa24.18■■□□□ 1.46
TRIM54-202ENST00000380075 KMT5BQ4FZB7 885 aa24.18■■□□□ 1.46
TRIM54-202ENST00000380075 JAKMIP3Q5VZ66 844 aa24.18■■□□□ 1.46
TRIM54-202ENST00000380075 SYT10Q6XYQ8 523 aa24.18■■□□□ 1.46
TRIM54-202ENST00000380075 CNGA4Q8IV77 575 aa24.18■■□□□ 1.46
TRIM54-202ENST00000380075 RIC8AQ9NPQ8 531 aa24.18■■□□□ 1.46
TRIM54-202ENST00000380075 PSMA7O14818 248 aa24.17■■□□□ 1.46
TRIM54-202ENST00000380075 SLU7O95391 586 aaKnown RBP24.17■■□□□ 1.46
TRIM54-202ENST00000380075 PLCG1P19174 1290 aa24.17■■□□□ 1.46
TRIM54-202ENST00000380075 PTPN21Q16825 1174 aa24.17■■□□□ 1.46
TRIM54-202ENST00000380075 TCP11X2Q5H9J9 407 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms