RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 ICA1Q05084 483 aa16.7■□□□□ 0.26
PRNP-201ENST00000379440 RRP1BQ14684 758 aaKnown RBP16.7■□□□□ 0.26
PRNP-201ENST00000379440 QRICH1Q2TAL8 776 aa16.7■□□□□ 0.26
PRNP-201ENST00000379440 CUL5Q93034 780 aa16.7■□□□□ 0.26
PRNP-201ENST00000379440 GJA10Q969M2 543 aa16.7■□□□□ 0.26
PRNP-201ENST00000379440 NUP88Q99567 741 aaPredicted RBP16.7■□□□□ 0.26
PRNP-201ENST00000379440 PSTPIP2Q9H939 334 aa16.7■□□□□ 0.26
PRNP-201ENST00000379440 PAXBP1Q9Y5B6 917 aa16.7■□□□□ 0.26
PRNP-201ENST00000379440 RAD17O75943 681 aa16.69■□□□□ 0.26
PRNP-201ENST00000379440 KCNJ6P48051 423 aa16.69■□□□□ 0.26
PRNP-201ENST00000379440 PSEN1P49768 467 aa16.69■□□□□ 0.26
PRNP-201ENST00000379440 PMS1P54277 932 aaKnown RBP16.69■□□□□ 0.26
PRNP-201ENST00000379440 ABCB5Q2M3G0 1257 aa16.69■□□□□ 0.26
PRNP-201ENST00000379440 PPP1R18Q6NYC8 613 aa16.69■□□□□ 0.26
PRNP-201ENST00000379440 ADSSL1Q8N142 457 aa16.69■□□□□ 0.26
PRNP-201ENST00000379440 SUPT20HQ8NEM7 779 aa16.69■□□□□ 0.26
PRNP-201ENST00000379440 RGPD3A6NKT7 1758 aaPredicted RBP16.69■□□□□ 0.26
PRNP-201ENST00000379440 RGPD4Q7Z3J3 1758 aa16.69■□□□□ 0.26
PRNP-201ENST00000379440 USP17L15C9J2P7 530 aa16.69■□□□□ 0.26
PRNP-201ENST00000379440 USP17L13C9JLJ4 530 aa16.69■□□□□ 0.26
PRNP-201ENST00000379440 USP17L11C9JVI0 530 aa16.69■□□□□ 0.26
PRNP-201ENST00000379440 USP17L18D6R9N7 530 aa16.69■□□□□ 0.26
PRNP-201ENST00000379440 USP17L22D6RA61 530 aa16.69■□□□□ 0.26
PRNP-201ENST00000379440 USP17L17D6RBQ6 530 aa16.69■□□□□ 0.26
PRNP-201ENST00000379440 USP17L19D6RCP7 530 aa16.69■□□□□ 0.26
PRNP-201ENST00000379440 USP17L20D6RJB6 530 aa16.69■□□□□ 0.26
PRNP-201ENST00000379440 NPM3O75607 178 aaKnown RBP16.69■□□□□ 0.26
PRNP-201ENST00000379440 USP17L24Q0WX57 530 aa16.69■□□□□ 0.26
PRNP-201ENST00000379440 KRT31Q15323 416 aa16.69■□□□□ 0.26
PRNP-201ENST00000379440 CC2D2BQ6DHV5 1058 aa16.69■□□□□ 0.26
PRNP-201ENST00000379440 USP17L6PQ6QN14 398 aa16.69■□□□□ 0.26
PRNP-201ENST00000379440 LRWD1Q9UFC0 647 aa16.69■□□□□ 0.26
PRNP-201ENST00000379440 POTEMA6NI47 508 aa16.68■□□□□ 0.26
PRNP-201ENST00000379440 TCP10L2B9ZVM9 353 aa16.68■□□□□ 0.26
PRNP-201ENST00000379440 F5H6K3 240 aa16.68■□□□□ 0.26
PRNP-201ENST00000379440 MRPL12P52815 198 aaKnown RBP16.68■□□□□ 0.26
PRNP-201ENST00000379440 KLRC3Q07444 240 aa16.68■□□□□ 0.26
PRNP-201ENST00000379440 ORC2Q13416 577 aaPredicted RBP16.68■□□□□ 0.26
PRNP-201ENST00000379440 KCNB1Q14721 858 aa16.68■□□□□ 0.26
PRNP-201ENST00000379440 TMEM179Q6ZVK1 233 aa16.68■□□□□ 0.26
PRNP-201ENST00000379440 CPLX3Q8WVH0 158 aa16.68■□□□□ 0.26
PRNP-201ENST00000379440 UIMC1Q96RL1 719 aa16.68■□□□□ 0.26
PRNP-201ENST00000379440 BAG1Q99933 345 aaPredicted RBP16.68■□□□□ 0.26
PRNP-201ENST00000379440 TRIM9Q9C026 710 aa16.68■□□□□ 0.26
PRNP-201ENST00000379440 CLRN2A0PK11 232 aa16.68■□□□□ 0.26
PRNP-201ENST00000379440 RHOBTB3O94955 611 aa16.68■□□□□ 0.26
PRNP-201ENST00000379440 GH2P01242 217 aa16.68■□□□□ 0.26
PRNP-201ENST00000379440 MYCNP04198 464 aaPredicted RBP16.68■□□□□ 0.26
PRNP-201ENST00000379440 PBX1P40424 430 aa16.68■□□□□ 0.26
PRNP-201ENST00000379440 DCAF4Q8WV16 495 aa16.68■□□□□ 0.26
PRNP-201ENST00000379440 CTAGE1Q96RT6 745 aa16.68■□□□□ 0.26
PRNP-201ENST00000379440 CSRNP1Q96S65 589 aa16.68■□□□□ 0.26
PRNP-201ENST00000379440 VPS16Q9H269 839 aa16.68■□□□□ 0.26
PRNP-201ENST00000379440 CUEDC2Q9H467 287 aa16.68■□□□□ 0.26
PRNP-201ENST00000379440 PCDHA1Q9Y5I3 950 aa16.68■□□□□ 0.26
PRNP-201ENST00000379440 ENTPD3O75355 529 aa16.67■□□□□ 0.26
PRNP-201ENST00000379440 MYL1P05976 194 aa16.67■□□□□ 0.26
PRNP-201ENST00000379440 GRB10Q13322 594 aa16.67■□□□□ 0.26
PRNP-201ENST00000379440 CDC37Q16543 378 aaPredicted RBP16.67■□□□□ 0.26
PRNP-201ENST00000379440 DEFB132Q7Z7B7 95 aa16.67■□□□□ 0.26
PRNP-201ENST00000379440 TTLL6Q8N841 843 aa16.67■□□□□ 0.26
PRNP-201ENST00000379440 CALML4Q96GE6 196 aa16.67■□□□□ 0.26
PRNP-201ENST00000379440 NUDT12Q9BQG2 462 aa16.67■□□□□ 0.26
PRNP-201ENST00000379440 ZNF277Q9NRM2 450 aaPredicted RBP16.67■□□□□ 0.26
PRNP-201ENST00000379440 ZBTB12Q9Y330 459 aaPredicted RBP16.67■□□□□ 0.26
PRNP-201ENST00000379440 FXR2P51116 673 aaKnown RBP eCLIP16.67■□□□□ 0.26
PRNP-201ENST00000379440 RBL2Q08999 1139 aa16.67■□□□□ 0.26
PRNP-201ENST00000379440 FILIP1LQ4L180 1135 aa16.67■□□□□ 0.26
PRNP-201ENST00000379440 ZNF710Q8N1W2 664 aa16.67■□□□□ 0.26
PRNP-201ENST00000379440 GIMAP8Q8ND71 665 aaPredicted RBP16.67■□□□□ 0.26
PRNP-201ENST00000379440 PNMA5Q96PV4 448 aa16.67■□□□□ 0.26
PRNP-201ENST00000379440 TAB2Q9NYJ8 693 aa16.67■□□□□ 0.26
PRNP-201ENST00000379440 LIMA1Q9UHB6 759 aaKnown RBP16.67■□□□□ 0.26
PRNP-201ENST00000379440 KCNJ18B7U540 433 aa16.66■□□□□ 0.26
PRNP-201ENST00000379440 ASIC1P78348 528 aa16.66■□□□□ 0.26
PRNP-201ENST00000379440 KCNJ12Q14500 433 aa16.66■□□□□ 0.26
PRNP-201ENST00000379440 TCP11X2Q5H9J9 407 aa16.66■□□□□ 0.26
PRNP-201ENST00000379440 ZNF771Q7L3S4 317 aaPredicted RBP16.66■□□□□ 0.26
PRNP-201ENST00000379440 DDX25Q9UHL0 483 aaKnown RBP16.66■□□□□ 0.26
PRNP-201ENST00000379440 LRRC10BA6NIK2 292 aa16.66■□□□□ 0.26
PRNP-201ENST00000379440 PSMD14O00487 310 aa16.66■□□□□ 0.26
PRNP-201ENST00000379440 N4BP3O15049 544 aa16.66■□□□□ 0.26
PRNP-201ENST00000379440 ARHGAP6O43182 974 aa16.66■□□□□ 0.26
PRNP-201ENST00000379440 NDUFB10O96000 172 aa16.66■□□□□ 0.26
PRNP-201ENST00000379440 TAL1P17542 331 aaPredicted RBP16.66■□□□□ 0.26
PRNP-201ENST00000379440 PDE4DQ08499 809 aa16.66■□□□□ 0.26
PRNP-201ENST00000379440 TMEM266Q2M3C6 531 aa16.66■□□□□ 0.26
PRNP-201ENST00000379440 RBM26Q5T8P6 1007 aaKnown RBP16.66■□□□□ 0.26
PRNP-201ENST00000379440 PPP4R3AQ6IN85 833 aa16.66■□□□□ 0.26
PRNP-201ENST00000379440 SYT10Q6XYQ8 523 aa16.66■□□□□ 0.26
PRNP-201ENST00000379440 IRF2BP1Q8IU81 584 aa16.66■□□□□ 0.26
PRNP-201ENST00000379440 HAS1Q92839 578 aa16.66■□□□□ 0.26
PRNP-201ENST00000379440 HPS3Q969F9 1004 aa16.66■□□□□ 0.26
PRNP-201ENST00000379440 C7orf25Q9BPX7 421 aa16.66■□□□□ 0.26
PRNP-201ENST00000379440 BLOC1S4Q9NUP1 217 aa16.66■□□□□ 0.26
PRNP-201ENST00000379440 ATF5Q9Y2D1 282 aaPredicted RBP16.66■□□□□ 0.26
PRNP-201ENST00000379440 ATRNL1Q5VV63 1379 aa16.66■□□□□ 0.26
PRNP-201ENST00000379440 A0A1W2PRG0 241 aa16.65■□□□□ 0.26
PRNP-201ENST00000379440 AKR1B15C9JRZ8 316 aaPredicted RBP16.65■□□□□ 0.26
PRNP-201ENST00000379440 CTIFO43310 598 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms