RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 RRAGAQ7L523 313 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 SELENONQ9NZV5 590 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 GPBP1L1Q9HC44 474 aaPredicted RBP12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 DNMBPQ6XZF7 1577 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 DENND4BO75064 1496 aaPredicted RBP12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 MCUQ8NE86 351 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 COG4Q9H9E3 785 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 SCINQ9Y6U3 715 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 FAM83GA6ND36 823 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 RFX6Q8HWS3 928 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 STAG1Q8WVM7 1258 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 PNMA3Q9UL41 463 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 A0A1B0GW55 424 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 POTEB3A0JP26 581 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 DUX4L2P0CJ85 424 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 DUX4L3P0CJ86 424 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 DUX4L4P0CJ87 422 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 DUX4L5P0CJ88 424 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 DUX4L6P0CJ89 424 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 DUX4L7P0CJ90 424 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 VPS41P49754 854 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 POTEBQ6S5H4 581 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 DUX4Q9UBX2 424 aa12.2□□□□□ -0.46
PTCHD1-201ENST00000379361 TYW1BQ6NUM6 668 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 MORC4Q8TE76 937 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 PPP2R3CQ969Q6 453 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 ZNF18P17022 549 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 SOX5P35711 763 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 MIS18BP1Q6P0N0 1132 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 STX18Q9P2W9 335 aaKnown RBP12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 SYNJ2BP-COX16A0A087WUM0 186 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 KRT8P05787 483 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 ARHGAP45Q92619 1136 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 TCEANC2Q96MN5 208 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 COX16Q9P0S2 106 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 AOC3Q16853 763 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 BEND3Q5T5X7 828 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 CYP2J2P51589 502 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 YWHAHQ04917 246 aaPredicted RBP12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 ATG16L1Q676U5 607 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 FARP1Q9Y4F1 1045 aaPredicted RBP12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 ALAS1P13196 640 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 NNMTP40261 264 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 LINS1Q8NG48 757 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 ZBTB18Q99592 522 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 GPBP1Q86WP2 473 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 TOP2BQ02880 1626 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 ARHGAP44Q17R89 818 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 HOMER3Q9NSC5 361 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 YTHDC2Q9H6S0 1430 aaKnown RBP12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 LRRC8CQ8TDW0 803 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 COPG1Q9Y678 874 aaKnown RBP12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 KDM5BQ9UGL1 1544 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 MAN1A2O60476 641 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 SPZ1Q9BXG8 430 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 VPS16Q9H269 839 aa12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.19□□□□□ -0.46
PTCHD1-201ENST00000379361 ABCA1O95477 2261 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 CA4P22748 312 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 CTNNA1P35221 906 aaKnown RBP12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 RCN2Q14257 317 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 BRD3Q15059 726 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 ASPSCR1Q9BZE9 553 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 BRWD1Q9NSI6 2320 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 SERPINI2O75830 405 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 HSPA6P17066 643 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 ERO1AQ96HE7 468 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 MID2Q9UJV3 735 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 IGF1RP08069 1367 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 SGK1O00141 431 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 PRKCQQ04759 706 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 NFATC2IPQ8NCF5 419 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 UPF3AQ9H1J1 476 aaKnown RBP12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 IMPACTQ9P2X3 320 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 PCDHB4Q9Y5E5 795 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 ESRRBO95718 433 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 TFCP2Q12800 502 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 LRMPQ12912 555 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 TGFBRAP1Q8WUH2 860 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 ARMCX5Q6P1M9 558 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 INTS4Q96HW7 963 aaKnown RBP12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 CABS1Q96KC9 395 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 SYCE1LA8MT33 242 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 MAFGO15525 162 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 ITGA6P23229 1130 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 SLC39A6Q13433 755 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 ARHGEF18Q6ZSZ5 1173 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 MAPK8IP1Q9UQF2 711 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 ARHGEF9O43307 516 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 CACNA1FO60840 1977 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 BFSP1Q12934 665 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 THOC5Q13769 683 aaKnown RBP12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 KRT87PA6NCN2 255 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 CSPG5O95196 566 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 ATP8A2Q9NTI2 1148 aa12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 SEPT9Q9UHD8 586 aaPredicted RBP12.18□□□□□ -0.46
PTCHD1-201ENST00000379361 ZFYVE9O95405 1425 aa12.17□□□□□ -0.46
PTCHD1-201ENST00000379361 PDE1AP54750 535 aa12.17□□□□□ -0.46
PTCHD1-201ENST00000379361 MFAP3P55082 362 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms