RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 TMTC3Q6ZXV5 915 aa9.11□□□□□ -0.95
PTPRR-203ENST00000378778 NLRP14Q86W24 1093 aa9.11□□□□□ -0.95
PTPRR-203ENST00000378778 GPATCH11Q8N954 259 aa9.11□□□□□ -0.95
PTPRR-203ENST00000378778 LRRC45Q96CN5 670 aa9.11□□□□□ -0.95
PTPRR-203ENST00000378778 ZIM3Q96PE6 472 aa9.11□□□□□ -0.95
PTPRR-203ENST00000378778 NOX5Q96PH1 765 aa9.11□□□□□ -0.95
PTPRR-203ENST00000378778 LACRTQ9GZZ8 138 aa9.11□□□□□ -0.95
PTPRR-203ENST00000378778 KBTBD4Q9NVX7 518 aa9.11□□□□□ -0.95
PTPRR-203ENST00000378778 C5orf60A6NFR6 353 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 KIF3CO14782 793 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 SRGAP2O75044 1071 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 TFRCP02786 760 aaKnown RBP9.1□□□□□ -0.95
PTPRR-203ENST00000378778 NF2P35240 595 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 TNNC1P63316 161 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 AMPD3Q01432 767 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 CRYMQ14894 314 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 FBXW10Q5XX13 1052 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 CCDC121Q6ZUS5 278 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 SMYD4Q8IYR2 804 aaPredicted RBP9.1□□□□□ -0.95
PTPRR-203ENST00000378778 SPATA5Q8NB90 893 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 P2RX5Q93086 422 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 PLEKHA4Q9H4M7 779 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 CNNM1Q9NRU3 951 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 BTNL10A8MVZ5 291 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 ELF1P32519 619 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 CTSWP56202 376 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 PPARAQ07869 468 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 CCDC96Q2M329 555 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 C10orf76Q5T2E6 689 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 IQCA1Q86XH1 822 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 MYCBPAPQ8TBZ2 947 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 ZSCAN10Q96SZ4 725 aaPredicted RBP9.1□□□□□ -0.95
PTPRR-203ENST00000378778 VEZTQ9HBM0 779 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 VPS54Q9P1Q0 977 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 SWAP70Q9UH65 585 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 DMGDHQ9UI17 866 aaKnown RBP9.1□□□□□ -0.95
PTPRR-203ENST00000378778 DENND2AQ9ULE3 1009 aa9.1□□□□□ -0.95
PTPRR-203ENST00000378778 ATAD5Q96QE3 1844 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 KLRC4O43908 158 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 EZRP15311 586 aaKnown RBP9.09□□□□□ -0.95
PTPRR-203ENST00000378778 ZNF174Q15697 407 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 NPY5RQ15761 445 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 SNCBQ16143 134 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 FMNL3Q8IVF7 1028 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 CSGALNACT2Q8N6G5 542 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 DAGLBQ8NCG7 672 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 ZKSCAN4Q969J2 545 aaPredicted RBP9.09□□□□□ -0.95
PTPRR-203ENST00000378778 ARL8AQ96BM9 186 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 CENPTQ96BT3 561 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 CCT8L2Q96SF2 557 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 MTRQ99707 1265 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 C7orf25Q9BPX7 421 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 CNOT10Q9H9A5 744 aaKnown RBP9.09□□□□□ -0.95
PTPRR-203ENST00000378778 BATF3Q9NR55 127 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 SUFUQ9UMX1 484 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 TNKSO95271 1327 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 GCFC2P16383 781 aaKnown RBP9.09□□□□□ -0.95
PTPRR-203ENST00000378778 ITGA6P23229 1130 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 ANXA13P27216 316 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 SLC8A3P57103 927 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 ITGB3BPQ13352 177 aaPredicted RBP9.09□□□□□ -0.95
PTPRR-203ENST00000378778 CDC37Q16543 378 aaPredicted RBP9.09□□□□□ -0.95
PTPRR-203ENST00000378778 CCDC178Q5BJE1 867 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 CEP85LQ5SZL2 805 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 CNNM4Q6P4Q7 775 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 GIGYF2Q6Y7W6 1299 aaKnown RBP9.09□□□□□ -0.95
PTPRR-203ENST00000378778 CROCCP2Q86T23 111 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 C4orf32Q8N8J7 132 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 TSEN2Q8NCE0 465 aaKnown RBP9.09□□□□□ -0.95
PTPRR-203ENST00000378778 CCHCR1Q8TD31 782 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 TBC1D22AQ8WUA7 517 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 NUP133Q8WUM0 1156 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 CALR3Q96L12 384 aaKnown RBP9.09□□□□□ -0.95
PTPRR-203ENST00000378778 BRIP1Q9BX63 1249 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 MOV10L1Q9BXT6 1211 aaKnown RBP9.09□□□□□ -0.95
PTPRR-203ENST00000378778 ZBTB3Q9H5J0 574 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 ATP6V0A4Q9HBG4 840 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 TMBIM4Q9HC24 238 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 SLC4A4Q9Y6R1 1079 aa9.09□□□□□ -0.95
PTPRR-203ENST00000378778 A0A1B0GUA9 196 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 RCCD1A6NED2 376 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 PDE8AO60658 829 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 DNAJC8O75937 253 aaPredicted RBP9.08□□□□□ -0.96
PTPRR-203ENST00000378778 GSTA1P08263 222 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 MYBP10242 640 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 SCG2P13521 617 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 KIF5BP33176 963 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 MAGEA1P43355 309 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 MTIF2P46199 727 aaKnown RBP9.08□□□□□ -0.96
PTPRR-203ENST00000378778 KIF11P52732 1056 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 PDCLQ13371 301 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 IFI16Q16666 785 aaKnown RBP9.08□□□□□ -0.96
PTPRR-203ENST00000378778 PFKFB3Q16875 520 aaPredicted RBP9.08□□□□□ -0.96
PTPRR-203ENST00000378778 IFIT1BQ5T764 474 aaKnown RBP9.08□□□□□ -0.96
PTPRR-203ENST00000378778 DTHD1Q6ZMT9 781 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 CCDC13Q8IYE1 715 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 MAGEB6Q8N7X4 407 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 NKX2-3Q8TAU0 364 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 SGSM3Q96HU1 749 aa9.08□□□□□ -0.96
PTPRR-203ENST00000378778 CNOT6LQ96LI5 555 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms