RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 NAA30Q147X3 362 aaPredicted RBP15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 R3HDM1Q15032 1099 aaKnown RBP15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 TMTC1Q8IUR5 882 aa15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 ANO3Q9BYT9 981 aa15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 BARHL2Q9NY43 387 aa15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 SRGNP10124 158 aa15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 CASP1P29466 404 aa15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 BIRC3Q13489 604 aa15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 PTPN21Q16825 1174 aa15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 CYP26C1Q6V0L0 522 aa15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 KRT26Q7Z3Y9 468 aa15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 VGLL2Q8N8G2 317 aa15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 NUP58Q9BVL2 599 aa15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 TEKT3Q9BXF9 490 aa15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 ZNRF3Q9ULT6 936 aa15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 SLIT3O75094 1523 aa15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 PPP4CP60510 307 aa15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 HLTFQ14527 1009 aaKnown RBP eCLIP15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 MAP9Q49MG5 647 aa15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 FAM83BQ5T0W9 1011 aa15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 ADGRA1Q86SQ6 560 aa15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 C10orf67Q8IYJ2 551 aa15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 CTNNBL1Q8WYA6 563 aaPredicted RBP15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 PAGE5Q96GU1 130 aa15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 FNBP1Q96RU3 617 aa15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 AZI2Q9H6S1 392 aa15.74■□□□□ 0.11
SHROOM1-203ENST00000378679 IKBKBO14920 756 aa15.73■□□□□ 0.11
SHROOM1-203ENST00000378679 USP14P54578 494 aa15.73■□□□□ 0.11
SHROOM1-203ENST00000378679 HHIPL2Q6UWX4 724 aa15.73■□□□□ 0.11
SHROOM1-203ENST00000378679 GPATCH11Q8N954 259 aa15.73■□□□□ 0.11
SHROOM1-203ENST00000378679 GLG1Q92896 1179 aa15.73■□□□□ 0.11
SHROOM1-203ENST00000378679 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.73■□□□□ 0.114e-10■■■■■ 155.8
SHROOM1-203ENST00000378679 LARSQ9P2J5 1176 aaKnown RBP15.73■□□□□ 0.11
SHROOM1-203ENST00000378679 PNMA2Q9UL42 364 aa15.73■□□□□ 0.11
SHROOM1-203ENST00000378679 FAM205CA6NFA0 338 aa15.73■□□□□ 0.11
SHROOM1-203ENST00000378679 NCAPG2Q86XI2 1143 aa15.73■□□□□ 0.11
SHROOM1-203ENST00000378679 FAM178BQ8IXR5 827 aa15.73■□□□□ 0.11
SHROOM1-203ENST00000378679 DCAF4Q8WV16 495 aa15.73■□□□□ 0.11
SHROOM1-203ENST00000378679 SLF1Q9BQI6 1058 aa15.73■□□□□ 0.11
SHROOM1-203ENST00000378679 MAGEF1Q9HAY2 307 aa15.73■□□□□ 0.11
SHROOM1-203ENST00000378679 COL4A3BPQ9Y5P4 624 aa15.73■□□□□ 0.11
SHROOM1-203ENST00000378679 CACNB1Q02641 598 aaPredicted RBP15.73■□□□□ 0.11
SHROOM1-203ENST00000378679 QRICH1Q2TAL8 776 aa15.73■□□□□ 0.11
SHROOM1-203ENST00000378679 RCSD1Q6JBY9 416 aa15.73■□□□□ 0.11
SHROOM1-203ENST00000378679 FAM160B2Q86V87 743 aa15.73■□□□□ 0.11
SHROOM1-203ENST00000378679 IPO4Q8TEX9 1081 aaKnown RBP15.73■□□□□ 0.11
SHROOM1-203ENST00000378679 VTI1AQ96AJ9 217 aa15.73■□□□□ 0.11
SHROOM1-203ENST00000378679 NAA15Q9BXJ9 866 aaKnown RBP15.73■□□□□ 0.11
SHROOM1-203ENST00000378679 MEIS1O00470 390 aa15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 BMS1Q14692 1282 aaKnown RBP15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 XKR9Q5GH70 373 aa15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 TTBK2Q6IQ55 1244 aa15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 ZNF577Q9BSK1 485 aa15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 TMEM260Q9NX78 707 aa15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 RABGAP1Q9Y3P9 1069 aa15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 ATP1A3P13637 1013 aa15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 TROAPQ12815 778 aa15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 LRRC41Q15345 812 aa15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 OR8K1Q8NGG5 319 aa15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 OGFRQ9NZT2 677 aa15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 DNM2P50570 870 aa15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 SHC4Q6S5L8 630 aa15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 ADGRF4Q8IZF3 695 aa15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 CAPZA3Q96KX2 299 aa15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 DISC1Q9NRI5 854 aa15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 SAMSN1Q9NSI8 373 aaKnown RBP15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 LRRC4BQ9NT99 713 aa15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 ANAPC4Q9UJX5 808 aa15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 PEAK1Q9H792 1746 aa15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 DDIT3P35638 169 aa15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 TERF1P54274 439 aa15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 LRRC8AQ8IWT6 810 aa15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 ZNF579Q8NAF0 562 aaKnown RBP15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 ARMCX3Q9UH62 379 aaPredicted RBP15.72■□□□□ 0.11
SHROOM1-203ENST00000378679 DPEP1P16444 411 aa15.71■□□□□ 0.11
SHROOM1-203ENST00000378679 CYP2J2P51589 502 aa15.71■□□□□ 0.11
SHROOM1-203ENST00000378679 SPP2Q13103 211 aa15.71■□□□□ 0.11
SHROOM1-203ENST00000378679 STYK1Q6J9G0 422 aa15.71■□□□□ 0.11
SHROOM1-203ENST00000378679 RRAGAQ7L523 313 aa15.71■□□□□ 0.11
SHROOM1-203ENST00000378679 EXOC7Q9UPT5 735 aa15.71■□□□□ 0.11
SHROOM1-203ENST00000378679 RGPD8O14715 1765 aaPredicted RBP15.71■□□□□ 0.11
SHROOM1-203ENST00000378679 C16orf86Q6ZW13 317 aa15.71■□□□□ 0.11
SHROOM1-203ENST00000378679 ENOX1Q8TC92 643 aaKnown RBP15.71■□□□□ 0.11
SHROOM1-203ENST00000378679 GJA10Q969M2 543 aa15.71■□□□□ 0.11
SHROOM1-203ENST00000378679 STK17AQ9UEE5 414 aa15.71■□□□□ 0.11
SHROOM1-203ENST00000378679 HERC5Q9UII4 1024 aaKnown RBP15.71■□□□□ 0.11
SHROOM1-203ENST00000378679 TCRBV5S4A2TA0A5A2 114 aa15.71■□□□□ 0.1
SHROOM1-203ENST00000378679 MCM3P25205 808 aa15.71■□□□□ 0.1
SHROOM1-203ENST00000378679 DDR1Q08345 913 aa15.71■□□□□ 0.1
SHROOM1-203ENST00000378679 STRN3Q13033 797 aa15.71■□□□□ 0.1
SHROOM1-203ENST00000378679 OTUD6AQ7L8S5 288 aa15.71■□□□□ 0.1
SHROOM1-203ENST00000378679 DNAI2Q9GZS0 605 aa15.71■□□□□ 0.1
SHROOM1-203ENST00000378679 UBE2Q2LH0YL09 131 aa15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 EIF2AK2P19525 551 aaKnown RBP15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 MAGEA1P43355 309 aa15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 CKAP4Q07065 602 aaKnown RBP15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 NCBP1Q09161 790 aaKnown RBP15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 SLC9C1Q4G0N8 1177 aa15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 WRNIP1Q96S55 665 aa15.7■□□□□ 0.1
SHROOM1-203ENST00000378679 DESI2Q9BSY9 194 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms