RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 CCDC151A5D8V7 595 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 GOLGA8KD6RF30 607 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 TRIM28Q13263 835 aaKnown RBP12.39□□□□□ -0.43
RPGR-203ENST00000378505 MCF2L2Q86YR7 1114 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 MB21D2Q8IYB1 491 aaPredicted RBP12.39□□□□□ -0.43
RPGR-203ENST00000378505 FMR1NBQ8N0W7 255 aaPredicted RBP12.39□□□□□ -0.43
RPGR-203ENST00000378505 ZNF579Q8NAF0 562 aaKnown RBP12.39□□□□□ -0.43
RPGR-203ENST00000378505 PIGSQ96S52 555 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 E7EVH7 732 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 K7ENM7 598 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 NDC80O14777 642 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 EHHADHQ08426 723 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 PABPC4Q13310 644 aaKnown RBP eCLIP12.39□□□□□ -0.43
RPGR-203ENST00000378505 ALX1Q15699 326 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 XKR9Q5GH70 373 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 TMED8Q6PL24 325 aaPredicted RBP12.39□□□□□ -0.43
RPGR-203ENST00000378505 DEPTORQ8TB45 409 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 CDHR2Q9BYE9 1310 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 TESPA1A2RU30 521 aaPredicted RBP12.39□□□□□ -0.43
RPGR-203ENST00000378505 ENC1O14682 589 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 RGS16O15492 202 aaPredicted RBP12.39□□□□□ -0.43
RPGR-203ENST00000378505 RCAN1P53805 252 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 RASSF7Q02833 373 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 ODR4Q5SWX8 454 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 FYB2Q5VWT5 728 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 TMTC3Q6ZXV5 915 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 CCDC170Q8IYT3 715 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 ISCA1Q9BUE6 129 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 H0YCG3 227 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 SERPINB2P05120 415 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 APBA1Q02410 837 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 USP17L2Q6R6M4 530 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 VTI1AQ96AJ9 217 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 THAP9Q9H5L6 903 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 SSX2IPQ9Y2D8 614 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 QRICH2Q9H0J4 1663 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 TULP4Q9NRJ4 1543 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 CRB1P82279 1406 aa12.39□□□□□ -0.43
RPGR-203ENST00000378505 PABPN1LA6NDY0 278 aaKnown RBP12.38□□□□□ -0.43
RPGR-203ENST00000378505 GNGT1P63211 74 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 DIXDC1Q155Q3 683 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 FAM102BQ5T8I3 360 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 ARMCX5Q6P1M9 558 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 PDE11AQ9HCR9 933 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 USP42Q9H9J4 1324 aaKnown RBP12.38□□□□□ -0.43
RPGR-203ENST00000378505 MRRFQ96E11 262 aaKnown RBP12.38□□□□□ -0.43
RPGR-203ENST00000378505 DYNLL2Q96FJ2 89 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 TSPOAP1O95153 1857 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 PLEKHA8P1O95397 391 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 AOC3Q16853 763 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 RABL6Q3YEC7 729 aaPredicted RBP12.38□□□□□ -0.43
RPGR-203ENST00000378505 BRINP3Q76B58 766 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 VSIG1Q86XK7 387 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 PPM1KQ8N3J5 372 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 C1orf112Q9NSG2 853 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 SERPINA10Q9UK55 444 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 LMTK2Q8IWU2 1503 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 SOWAHDA6NJG2 315 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 GAP43P17677 238 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 KRT15P19012 456 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 PLCG1P19174 1290 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 SEPT2Q15019 361 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 HHATQ5VTY9 493 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 LRCH2Q5VUJ6 765 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 GINS2Q9Y248 185 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 IVNS1ABPQ9Y6Y0 642 aa12.38□□□□□ -0.43
RPGR-203ENST00000378505 E9PCH4 1651 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 TCP10L2B9ZVM9 353 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 TRIM37O94972 964 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 YWHAEP62258 255 aaKnown RBP12.37□□□□□ -0.43
RPGR-203ENST00000378505 LRRC41Q15345 812 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 CFAP157Q5JU67 520 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 ARHGEF16Q5VV41 709 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 ACRBPQ8NEB7 543 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 HOMER3Q9NSC5 361 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 THRAP3Q9Y2W1 955 aaKnown RBP12.37□□□□□ -0.43
RPGR-203ENST00000378505 NDUFA10O95299 355 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 GUCY2DQ02846 1103 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 PSMD2Q13200 908 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 BRDTQ58F21 947 aaPredicted RBP12.37□□□□□ -0.43
RPGR-203ENST00000378505 CYB5R4Q7L1T6 521 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 PPFIBP2Q8ND30 876 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 CCDC127Q96BQ5 260 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 COA7Q96BR5 231 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 DISC1Q9NRI5 854 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 ARHGEF40Q8TER5 1519 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 PPEF1O14829 653 aaPredicted RBP12.37□□□□□ -0.43
RPGR-203ENST00000378505 ARID5BQ14865 1188 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 GLG1Q92896 1179 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 AS3MTQ9HBK9 375 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 SH3GLB2Q9NR46 395 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 RNF14Q9UBS8 474 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 SNAP23O00161 211 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 KRT19P08727 400 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 LMNB1P20700 586 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 LIG4P49917 911 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 KRT31Q15323 416 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 LGSNQ5TDP6 509 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 BCAS4Q8TDM0 211 aa12.37□□□□□ -0.43
RPGR-203ENST00000378505 PSMD1Q99460 953 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms