RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 OR2W6PQ8NHA6 318 aa17.61■□□□□ 0.41
CKAP4-201ENST00000378026 KRT12Q99456 494 aa17.61■□□□□ 0.41
CKAP4-201ENST00000378026 SLC40A1Q9NP59 571 aa17.61■□□□□ 0.41
CKAP4-201ENST00000378026 IRS4O14654 1257 aaPredicted RBP17.61■□□□□ 0.41
CKAP4-201ENST00000378026 NF2P35240 595 aa17.61■□□□□ 0.41
CKAP4-201ENST00000378026 BCAMP50895 628 aa17.61■□□□□ 0.41
CKAP4-201ENST00000378026 GFPT1Q06210 699 aaPredicted RBP17.61■□□□□ 0.41
CKAP4-201ENST00000378026 RRAGAQ7L523 313 aa17.61■□□□□ 0.41
CKAP4-201ENST00000378026 KIRREL3Q8IZU9 778 aa17.61■□□□□ 0.41
CKAP4-201ENST00000378026 SRBD1Q8N5C6 995 aaKnown RBP17.61■□□□□ 0.41
CKAP4-201ENST00000378026 CAVIN3Q969G5 261 aa17.61■□□□□ 0.41
CKAP4-201ENST00000378026 ADAMTS7Q9UKP4 1686 aa17.61■□□□□ 0.41
CKAP4-201ENST00000378026 RTL9Q8NET4 1388 aa17.6■□□□□ 0.41
CKAP4-201ENST00000378026 FCER1AP12319 257 aa17.6■□□□□ 0.41
CKAP4-201ENST00000378026 UBA7P41226 1012 aa17.6■□□□□ 0.41
CKAP4-201ENST00000378026 CTSWP56202 376 aa17.6■□□□□ 0.41
CKAP4-201ENST00000378026 PDE4DQ08499 809 aa17.6■□□□□ 0.41
CKAP4-201ENST00000378026 IQCKQ8N0W5 287 aa17.6■□□□□ 0.41
CKAP4-201ENST00000378026 MTMR8Q96EF0 704 aa17.6■□□□□ 0.41
CKAP4-201ENST00000378026 VCPKMTQ9H867 229 aa17.6■□□□□ 0.41
CKAP4-201ENST00000378026 TRMT112Q9UI30 125 aaKnown RBP17.6■□□□□ 0.41
CKAP4-201ENST00000378026 MTMR7Q9Y216 660 aa17.6■□□□□ 0.41
CKAP4-201ENST00000378026 NID2Q14112 1375 aa17.6■□□□□ 0.41
CKAP4-201ENST00000378026 PKD1L3Q7Z443 1732 aa17.6■□□□□ 0.41
CKAP4-201ENST00000378026 CYP7A1P22680 504 aa17.6■□□□□ 0.41
CKAP4-201ENST00000378026 MDH1P40925 334 aaKnown RBP17.6■□□□□ 0.41
CKAP4-201ENST00000378026 NEDD9Q14511 834 aa17.6■□□□□ 0.41
CKAP4-201ENST00000378026 ENOX2Q16206 610 aaKnown RBP17.6■□□□□ 0.41
CKAP4-201ENST00000378026 TLR10Q9BXR5 811 aa17.6■□□□□ 0.41
CKAP4-201ENST00000378026 ODF2LQ9ULJ1 636 aa17.6■□□□□ 0.41
CKAP4-201ENST00000378026 GOLGA6L7A0A1B0GV03 622 aa17.59■□□□□ 0.41
CKAP4-201ENST00000378026 FTCDO95954 541 aa17.59■□□□□ 0.41
CKAP4-201ENST00000378026 DDR1Q08345 913 aa17.59■□□□□ 0.41
CKAP4-201ENST00000378026 STK4Q13043 487 aa17.59■□□□□ 0.41
CKAP4-201ENST00000378026 HLTFQ14527 1009 aaKnown RBP eCLIP17.59■□□□□ 0.41
CKAP4-201ENST00000378026 PTPROQ16827 1216 aa17.59■□□□□ 0.41
CKAP4-201ENST00000378026 SPRED3Q2MJR0 410 aa17.59■□□□□ 0.41
CKAP4-201ENST00000378026 SLC4A8Q2Y0W8 1093 aa17.59■□□□□ 0.41
CKAP4-201ENST00000378026 CCDC121Q6ZUS5 278 aa17.59■□□□□ 0.41
CKAP4-201ENST00000378026 KLHL7Q8IXQ5 586 aa17.59■□□□□ 0.41
CKAP4-201ENST00000378026 GPKOWQ92917 476 aaPredicted RBP eCLIP17.59■□□□□ 0.41
CKAP4-201ENST00000378026 ZNF512BQ96KM6 892 aaPredicted RBP17.59■□□□□ 0.41
CKAP4-201ENST00000378026 KLRC4O43908 158 aa17.59■□□□□ 0.41
CKAP4-201ENST00000378026 EVX2Q03828 476 aa17.59■□□□□ 0.41
CKAP4-201ENST00000378026 PUM3Q15397 648 aaKnown RBP17.59■□□□□ 0.41
CKAP4-201ENST00000378026 TDRD12Q587J7 1177 aaKnown RBP17.59■□□□□ 0.41
CKAP4-201ENST00000378026 ADGRA1Q86SQ6 560 aa17.59■□□□□ 0.41
CKAP4-201ENST00000378026 PIK3R5Q8WYR1 880 aa17.59■□□□□ 0.41
CKAP4-201ENST00000378026 LPIN2Q92539 896 aa17.59■□□□□ 0.41
CKAP4-201ENST00000378026 PLAAQ9Y263 795 aa17.59■□□□□ 0.41
CKAP4-201ENST00000378026 ELF1P32519 619 aa17.58■□□□□ 0.41
CKAP4-201ENST00000378026 MIIPQ5JXC2 388 aa17.58■□□□□ 0.41
CKAP4-201ENST00000378026 MYH6P13533 1939 aa17.58■□□□□ 0.41
CKAP4-201ENST00000378026 A6NNZ2 444 aa17.58■□□□□ 0.4
CKAP4-201ENST00000378026 TMOD1P28289 359 aa17.58■□□□□ 0.4
CKAP4-201ENST00000378026 TUBB8Q3ZCM7 444 aa17.58■□□□□ 0.4
CKAP4-201ENST00000378026 CFAP221Q4G0U5 840 aa17.58■□□□□ 0.4
CKAP4-201ENST00000378026 DTHD1Q6ZMT9 781 aa17.58■□□□□ 0.4
CKAP4-201ENST00000378026 CASKIN2Q8WXE0 1202 aa17.58■□□□□ 0.4
CKAP4-201ENST00000378026 P2RX5Q93086 422 aa17.58■□□□□ 0.4
CKAP4-201ENST00000378026 ATP6V1G3Q96LB4 118 aa17.58■□□□□ 0.4
CKAP4-201ENST00000378026 PYM1Q9BRP8 204 aaKnown RBP17.58■□□□□ 0.4
CKAP4-201ENST00000378026 TMEM60Q9H2L4 133 aa17.58■□□□□ 0.4
CKAP4-201ENST00000378026 LRRC53A6NM62 1247 aa17.58■□□□□ 0.4
CKAP4-201ENST00000378026 TROAPQ12815 778 aa17.58■□□□□ 0.4
CKAP4-201ENST00000378026 PAK2Q13177 524 aa17.58■□□□□ 0.4
CKAP4-201ENST00000378026 SPATS2Q86XZ4 545 aaKnown RBP17.58■□□□□ 0.4
CKAP4-201ENST00000378026 GIMAP8Q8ND71 665 aaPredicted RBP17.58■□□□□ 0.4
CKAP4-201ENST00000378026 LRRC15Q8TF66 581 aa17.58■□□□□ 0.4
CKAP4-201ENST00000378026 HAUS2Q9NVX0 235 aa17.58■□□□□ 0.4
CKAP4-201ENST00000378026 LONP1P36776 959 aaKnown RBP17.57■□□□□ 0.4
CKAP4-201ENST00000378026 SLC1A4P43007 532 aa17.57■□□□□ 0.4
CKAP4-201ENST00000378026 ASIC1P78348 528 aa17.57■□□□□ 0.4
CKAP4-201ENST00000378026 ODF2Q5BJF6 829 aa17.57■□□□□ 0.4
CKAP4-201ENST00000378026 FAM47AQ5JRC9 791 aa17.57■□□□□ 0.4
CKAP4-201ENST00000378026 KLHDC7AQ5VTJ3 777 aa17.57■□□□□ 0.4
CKAP4-201ENST00000378026 RETREG2Q8NC44 543 aa17.57■□□□□ 0.4
CKAP4-201ENST00000378026 LRP6O75581 1613 aa17.57■□□□□ 0.4
CKAP4-201ENST00000378026 SMTNP53814 917 aa17.57■□□□□ 0.4
CKAP4-201ENST00000378026 TMTC3Q6ZXV5 915 aa17.57■□□□□ 0.4
CKAP4-201ENST00000378026 IQCA1Q86XH1 822 aa17.57■□□□□ 0.4
CKAP4-201ENST00000378026 DNAJC10Q8IXB1 793 aa17.57■□□□□ 0.4
CKAP4-201ENST00000378026 CCDC155Q8N6L0 562 aa17.57■□□□□ 0.4
CKAP4-201ENST00000378026 CYFIP2Q96F07 1278 aa17.57■□□□□ 0.4
CKAP4-201ENST00000378026 PLAGL2Q9UPG8 496 aa17.57■□□□□ 0.4
CKAP4-201ENST00000378026 FAM205AQ6ZU69 1335 aa17.57■□□□□ 0.4
CKAP4-201ENST00000378026 SCG2P13521 617 aa17.56■□□□□ 0.4
CKAP4-201ENST00000378026 SLC5A1P13866 664 aa17.56■□□□□ 0.4
CKAP4-201ENST00000378026 GNAT2P19087 354 aa17.56■□□□□ 0.4
CKAP4-201ENST00000378026 NOC3LQ8WTT2 800 aaKnown RBP17.56■□□□□ 0.4
CKAP4-201ENST00000378026 SLC39A2Q9NP94 309 aa17.56■□□□□ 0.4
CKAP4-201ENST00000378026 NLRC4Q9NPP4 1024 aa17.56■□□□□ 0.4
CKAP4-201ENST00000378026 PHRF1Q9P1Y6 1649 aaKnown RBP17.56■□□□□ 0.4
CKAP4-201ENST00000378026 GOLGA6L10A6NI86 522 aa17.56■□□□□ 0.4
CKAP4-201ENST00000378026 FAM107AO95990 144 aa17.56■□□□□ 0.4
CKAP4-201ENST00000378026 RPSAP08865 295 aaKnown RBP17.56■□□□□ 0.4
CKAP4-201ENST00000378026 ITIH3Q06033 890 aa17.56■□□□□ 0.4
CKAP4-201ENST00000378026 NLRP10Q86W26 655 aa17.56■□□□□ 0.4
CKAP4-201ENST00000378026 PLA2G12BQ9BX93 195 aa17.56■□□□□ 0.4
CKAP4-201ENST00000378026 MCM8Q9UJA3 840 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms