RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 SHTN1A0MZ66 631 aa12.84□□□□□ -0.35
SEC23B-204ENST00000377475 LRRC53A6NM62 1247 aa12.84□□□□□ -0.35
SEC23B-204ENST00000377475 USP14P54578 494 aa12.84□□□□□ -0.35
SEC23B-204ENST00000377475 GRIK5Q16478 980 aa12.84□□□□□ -0.35
SEC23B-204ENST00000377475 FAM98CQ17RN3 349 aaKnown RBP12.84□□□□□ -0.35
SEC23B-204ENST00000377475 SV2BQ7L1I2 683 aa12.84□□□□□ -0.35
SEC23B-204ENST00000377475 FAM196BA6NMK8 535 aa12.84□□□□□ -0.35
SEC23B-204ENST00000377475 TDP2O95551 362 aa12.84□□□□□ -0.35
SEC23B-204ENST00000377475 TBC1D10BQ4KMP7 808 aaPredicted RBP12.84□□□□□ -0.35
SEC23B-204ENST00000377475 LRRC31Q6UY01 552 aa12.84□□□□□ -0.35
SEC23B-204ENST00000377475 IRF2BP1Q8IU81 584 aa12.84□□□□□ -0.35
SEC23B-204ENST00000377475 ADSSL1Q8N142 457 aa12.84□□□□□ -0.35
SEC23B-204ENST00000377475 NSUN4Q96CB9 384 aaKnown RBP12.84□□□□□ -0.35
SEC23B-204ENST00000377475 KRT12Q99456 494 aa12.84□□□□□ -0.35
SEC23B-204ENST00000377475 CCDC113Q9H0I3 377 aa12.84□□□□□ -0.35
SEC23B-204ENST00000377475 PPANQ9NQ55 473 aaKnown RBP12.84□□□□□ -0.35
SEC23B-204ENST00000377475 LIMA1Q9UHB6 759 aaKnown RBP12.84□□□□□ -0.35
SEC23B-204ENST00000377475 OVOS2A0A0G2JMS6 1433 aa12.83□□□□□ -0.36
SEC23B-204ENST00000377475 EBAG9O00559 213 aa12.83□□□□□ -0.36
SEC23B-204ENST00000377475 ATP8B1O43520 1251 aa12.83□□□□□ -0.36
SEC23B-204ENST00000377475 HSF2BPO75031 334 aa12.83□□□□□ -0.36
SEC23B-204ENST00000377475 KIF11P52732 1056 aa12.83□□□□□ -0.36
SEC23B-204ENST00000377475 NONOQ15233 471 aaKnown RBP eCLIP12.83□□□□□ -0.36
SEC23B-204ENST00000377475 WDR59Q6PJI9 974 aa12.83□□□□□ -0.36
SEC23B-204ENST00000377475 TEX11Q8IYF3 940 aa12.83□□□□□ -0.36
SEC23B-204ENST00000377475 EPB41L5Q9HCM4 733 aa12.83□□□□□ -0.36
SEC23B-204ENST00000377475 FAM53CQ9NYF3 392 aa12.83□□□□□ -0.36
SEC23B-204ENST00000377475 ADAMTS1Q9UHI8 967 aa12.83□□□□□ -0.36
SEC23B-204ENST00000377475 C5P01031 1676 aa12.83□□□□□ -0.36
SEC23B-204ENST00000377475 NPHP3-ACAD11A0A0J9YXS1 232 aa12.83□□□□□ -0.36
SEC23B-204ENST00000377475 FAM237AA0A1B0GTK4 181 aa12.83□□□□□ -0.36
SEC23B-204ENST00000377475 MEIS1O00470 390 aa12.83□□□□□ -0.36
SEC23B-204ENST00000377475 OR52Z1P0C646 297 aa12.83□□□□□ -0.36
SEC23B-204ENST00000377475 CCDC43Q96MW1 224 aaKnown RBP12.83□□□□□ -0.36
SEC23B-204ENST00000377475 SPAG5Q96R06 1193 aa12.83□□□□□ -0.36
SEC23B-204ENST00000377475 EYA3Q99504 573 aa12.83□□□□□ -0.36
SEC23B-204ENST00000377475 FER1L4A9Z1Z3 1794 aa12.82□□□□□ -0.36
SEC23B-204ENST00000377475 LONP1P36776 959 aaKnown RBP12.82□□□□□ -0.36
SEC23B-204ENST00000377475 RBM5P52756 815 aaKnown RBP eCLIP12.82□□□□□ -0.36
SEC23B-204ENST00000377475 TBC1D9BQ66K14 1250 aa12.82□□□□□ -0.36
SEC23B-204ENST00000377475 PTF1AQ7RTS3 328 aa12.82□□□□□ -0.36
SEC23B-204ENST00000377475 ZNF384Q8TF68 577 aa12.82□□□□□ -0.36
SEC23B-204ENST00000377475 TMEM47Q9BQJ4 181 aa12.82□□□□□ -0.36
SEC23B-204ENST00000377475 PCDHA6Q9UN73 950 aa12.82□□□□□ -0.36
SEC23B-204ENST00000377475 PCDHA8Q9Y5H6 950 aa12.82□□□□□ -0.36
SEC23B-204ENST00000377475 TLDC2A0PJX2 215 aa12.82□□□□□ -0.36
SEC23B-204ENST00000377475 KIAA0754O94854 1291 aa12.82□□□□□ -0.36
SEC23B-204ENST00000377475 CALCRLQ16602 461 aa12.82□□□□□ -0.36
SEC23B-204ENST00000377475 HERC4Q5GLZ8 1057 aaPredicted RBP12.82□□□□□ -0.36
SEC23B-204ENST00000377475 SLC30A10Q6XR72 485 aa12.82□□□□□ -0.36
SEC23B-204ENST00000377475 AP1M1Q9BXS5 423 aa12.82□□□□□ -0.36
SEC23B-204ENST00000377475 C6orf50Q9HD87 102 aa12.82□□□□□ -0.36
SEC23B-204ENST00000377475 PCDHA13Q9Y5I0 950 aa12.82□□□□□ -0.36
SEC23B-204ENST00000377475 SLC1A4P43007 532 aa12.82□□□□□ -0.36
SEC23B-204ENST00000377475 TRIM14Q14142 442 aa12.82□□□□□ -0.36
SEC23B-204ENST00000377475 CFAP58Q5T655 872 aa12.82□□□□□ -0.36
SEC23B-204ENST00000377475 FAM133AQ8N9E0 248 aa12.82□□□□□ -0.36
SEC23B-204ENST00000377475 TBC1D5Q92609 795 aa12.82□□□□□ -0.36
SEC23B-204ENST00000377475 TAF4BQ92750 862 aa12.82□□□□□ -0.36
SEC23B-204ENST00000377475 LSM14BQ9BX40 385 aaKnown RBP12.82□□□□□ -0.36
SEC23B-204ENST00000377475 BMP2KQ9NSY1 1161 aaPredicted RBP12.82□□□□□ -0.36
SEC23B-204ENST00000377475 PNPLA7Q6ZV29 1317 aa12.82□□□□□ -0.36
SEC23B-204ENST00000377475 MAP2K7O14733 419 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 DDAH1O94760 285 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 CYP4A11Q02928 519 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 TRADDQ15628 312 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 NAALADL2Q58DX5 795 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 FBXW10Q5XX13 1052 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 IQCEQ6IPM2 695 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 MAEAQ7L5Y9 396 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 REXO1Q8N1G1 1221 aaKnown RBP12.81□□□□□ -0.36
SEC23B-204ENST00000377475 EHBP1Q8NDI1 1231 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 ARL8AQ96BM9 186 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 NDST4Q9H3R1 872 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 HPCAL4Q9UM19 191 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 USP17L5A8MUK1 530 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 CEP104O60308 925 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 TAL1P17542 331 aaPredicted RBP12.81□□□□□ -0.36
SEC23B-204ENST00000377475 AMPD3Q01432 767 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 FUT2Q10981 343 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 NPY5RQ15761 445 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 TMEM266Q2M3C6 531 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 PARP10Q53GL7 1025 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 KRT79Q5XKE5 535 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 SH3RF1Q7Z6J0 888 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 TAX1BP1Q86VP1 789 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 RDH13Q8NBN7 331 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 OR2W6PQ8NHA6 318 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 CAPS2Q9BXY5 557 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 BICDL2A1A5D9 508 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 KCNK3O14649 394 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 CYTH3O43739 400 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 TCP10Q12799 353 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 KIAA0753Q2KHM9 967 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 INTS5Q6P9B9 1019 aaKnown RBP12.81□□□□□ -0.36
SEC23B-204ENST00000377475 KCTD1Q719H9 257 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 NUDT12Q9BQG2 462 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 TRIM9Q9C026 710 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 IL17RBQ9NRM6 502 aa12.81□□□□□ -0.36
SEC23B-204ENST00000377475 ZNF804BA4D1E1 1349 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms