RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 PSMD14O00487 310 aa20.23■□□□□ 0.83
SF1-203ENST00000377387 CAPN2P17655 700 aa20.23■□□□□ 0.83
SF1-203ENST00000377387 CCDC96Q2M329 555 aa20.23■□□□□ 0.83
SF1-203ENST00000377387 BARGINQ6ZT62 677 aa20.23■□□□□ 0.83
SF1-203ENST00000377387 NEK8Q86SG6 692 aa20.23■□□□□ 0.83
SF1-203ENST00000377387 CLEC10AQ8IUN9 316 aa20.23■□□□□ 0.83
SF1-203ENST00000377387 TEX11Q8IYF3 940 aa20.23■□□□□ 0.83
SF1-203ENST00000377387 GJA10Q969M2 543 aa20.23■□□□□ 0.83
SF1-203ENST00000377387 MMRN2Q9H8L6 949 aa20.23■□□□□ 0.83
SF1-203ENST00000377387 C6orf50Q9HD87 102 aa20.23■□□□□ 0.83
SF1-203ENST00000377387 KIAA0895Q8NCT3 520 aa20.22■□□□□ 0.83
SF1-203ENST00000377387 RRP36Q96EU6 259 aaKnown RBP20.22■□□□□ 0.83
SF1-203ENST00000377387 CEP95Q96GE4 821 aa20.22■□□□□ 0.83
SF1-203ENST00000377387 ZMYND12Q9H0C1 365 aa20.22■□□□□ 0.83
SF1-203ENST00000377387 USP17L5A8MUK1 530 aa20.22■□□□□ 0.83
SF1-203ENST00000377387 EPHB6O15197 1021 aa20.22■□□□□ 0.83
SF1-203ENST00000377387 MATR3P43243 847 aaKnown RBP eCLIP20.22■□□□□ 0.83
SF1-203ENST00000377387 LRRC41Q15345 812 aa20.22■□□□□ 0.83
SF1-203ENST00000377387 RIN2Q8WYP3 895 aaPredicted RBP20.22■□□□□ 0.83
SF1-203ENST00000377387 CCDC42Q96M95 316 aa20.22■□□□□ 0.83
SF1-203ENST00000377387 MMTAG2Q9BU76 263 aaKnown RBP20.22■□□□□ 0.83
SF1-203ENST00000377387 SEMA6BQ9H3T3 888 aa20.22■□□□□ 0.83
SF1-203ENST00000377387 IRX5P78411 483 aaPredicted RBP20.21■□□□□ 0.83
SF1-203ENST00000377387 C2orf54Q08AI8 447 aa20.21■□□□□ 0.83
SF1-203ENST00000377387 MIIPQ5JXC2 388 aa20.21■□□□□ 0.83
SF1-203ENST00000377387 KRT25Q7Z3Z0 450 aa20.21■□□□□ 0.83
SF1-203ENST00000377387 C2CD5Q86YS7 1000 aa20.21■□□□□ 0.83
SF1-203ENST00000377387 ANKRD13CQ8N6S4 541 aa20.21■□□□□ 0.83
SF1-203ENST00000377387 AHDC1Q5TGY3 1603 aaPredicted RBP20.21■□□□□ 0.83
SF1-203ENST00000377387 BICDL2A1A5D9 508 aa20.21■□□□□ 0.83
SF1-203ENST00000377387 PDE2AO00408 941 aaPredicted RBP20.21■□□□□ 0.83
SF1-203ENST00000377387 ZBED6P86452 979 aa20.21■□□□□ 0.83
SF1-203ENST00000377387 DAGLBQ8NCG7 672 aa20.21■□□□□ 0.83
SF1-203ENST00000377387 ANKS1AQ92625 1134 aa20.21■□□□□ 0.83
SF1-203ENST00000377387 EXOC4Q96A65 974 aa20.21■□□□□ 0.83
SF1-203ENST00000377387 CALML4Q96GE6 196 aa20.21■□□□□ 0.83
SF1-203ENST00000377387 GBP3Q9H0R5 595 aa20.21■□□□□ 0.83
SF1-203ENST00000377387 POTEMA6NI47 508 aa20.2■□□□□ 0.82
SF1-203ENST00000377387 USP14P54578 494 aa20.2■□□□□ 0.82
SF1-203ENST00000377387 FKBP15Q5T1M5 1219 aa20.2■□□□□ 0.82
SF1-203ENST00000377387 TTYH3Q9C0H2 523 aa20.2■□□□□ 0.82
SF1-203ENST00000377387 RTCBQ9Y3I0 505 aaKnown RBP20.2■□□□□ 0.82
SF1-203ENST00000377387 LAMB2P55268 1798 aa20.2■□□□□ 0.82
SF1-203ENST00000377387 ZNF263O14978 683 aa20.2■□□□□ 0.82
SF1-203ENST00000377387 RPS6KA4O75676 772 aa20.2■□□□□ 0.82
SF1-203ENST00000377387 RAD51AP2Q09MP3 1159 aa20.2■□□□□ 0.82
SF1-203ENST00000377387 KIF5AQ12840 1032 aa20.2■□□□□ 0.82
SF1-203ENST00000377387 CCDC155Q8N6L0 562 aa20.2■□□□□ 0.82
SF1-203ENST00000377387 GLIS3Q8NEA6 775 aa20.2■□□□□ 0.82
SF1-203ENST00000377387 CDK5RAP3Q96JB5 506 aa20.2■□□□□ 0.82
SF1-203ENST00000377387 MLXIPQ9HAP2 919 aa20.2■□□□□ 0.82
SF1-203ENST00000377387 NRAPQ86VF7 1730 aa20.2■□□□□ 0.82
SF1-203ENST00000377387 A0A0U1RQG5 324 aaPredicted RBP20.2■□□□□ 0.82
SF1-203ENST00000377387 TDP2O95551 362 aa20.2■□□□□ 0.82
SF1-203ENST00000377387 GNA11P29992 359 aa20.2■□□□□ 0.82
SF1-203ENST00000377387 CXCR5P32302 372 aa20.2■□□□□ 0.82
SF1-203ENST00000377387 PRPHP41219 470 aa20.2■□□□□ 0.82
SF1-203ENST00000377387 PICALMQ13492 652 aa20.2■□□□□ 0.82
SF1-203ENST00000377387 GALNT17Q6IS24 598 aa20.2■□□□□ 0.82
SF1-203ENST00000377387 LRRC47Q8N1G4 583 aaKnown RBP20.2■□□□□ 0.82
SF1-203ENST00000377387 DEF6Q9H4E7 631 aa20.2■□□□□ 0.82
SF1-203ENST00000377387 SMARCAL1Q9NZC9 954 aa20.2■□□□□ 0.82
SF1-203ENST00000377387 MYMKA6NI61 221 aa20.19■□□□□ 0.82
SF1-203ENST00000377387 LAD1O00515 517 aa20.19■□□□□ 0.82
SF1-203ENST00000377387 SPA17Q15506 151 aa20.19■□□□□ 0.82
SF1-203ENST00000377387 MEA1Q16626 185 aa20.19■□□□□ 0.82
SF1-203ENST00000377387 SV2BQ7L1I2 683 aa20.19■□□□□ 0.82
SF1-203ENST00000377387 REXO1Q8N1G1 1221 aaKnown RBP20.19■□□□□ 0.82
SF1-203ENST00000377387 GSTO1P78417 241 aa20.19■□□□□ 0.82
SF1-203ENST00000377387 NUDT12Q9BQG2 462 aa20.19■□□□□ 0.82
SF1-203ENST00000377387 TANGO6Q9C0B7 1094 aa20.19■□□□□ 0.82
SF1-203ENST00000377387 GPCPD1Q9NPB8 672 aa20.19■□□□□ 0.82
SF1-203ENST00000377387 KIAA1551Q9HCM1 1747 aa20.18■□□□□ 0.82
SF1-203ENST00000377387 MYL1P05976 194 aa20.18■□□□□ 0.82
SF1-203ENST00000377387 MYBL2P10244 700 aa20.18■□□□□ 0.82
SF1-203ENST00000377387 AMPD3Q01432 767 aa20.18■□□□□ 0.82
SF1-203ENST00000377387 MAPK8IP2Q13387 824 aaPredicted RBP20.18■□□□□ 0.82
SF1-203ENST00000377387 TMED8Q6PL24 325 aaPredicted RBP20.18■□□□□ 0.82
SF1-203ENST00000377387 FAM114A1Q8IWE2 563 aa20.18■□□□□ 0.82
SF1-203ENST00000377387 NOC3LQ8WTT2 800 aaKnown RBP20.18■□□□□ 0.82
SF1-203ENST00000377387 AK8Q96MA6 479 aa20.18■□□□□ 0.82
SF1-203ENST00000377387 C7orf25Q9BPX7 421 aa20.18■□□□□ 0.82
SF1-203ENST00000377387 NUP58Q9BVL2 599 aa20.18■□□□□ 0.82
SF1-203ENST00000377387 RTFDC1Q9BY42 306 aaPredicted RBP20.18■□□□□ 0.82
SF1-203ENST00000377387 PLEKHA4Q9H4M7 779 aa20.18■□□□□ 0.82
SF1-203ENST00000377387 COL22A1Q8NFW1 1626 aaPredicted RBP20.18■□□□□ 0.82
SF1-203ENST00000377387 SLC37A4O43826 429 aa20.18■□□□□ 0.82
SF1-203ENST00000377387 UFL1O94874 794 aa20.18■□□□□ 0.82
SF1-203ENST00000377387 MOCS3O95396 460 aa20.18■□□□□ 0.82
SF1-203ENST00000377387 SSBP05455 408 aaKnown RBP eCLIP20.18■□□□□ 0.82
SF1-203ENST00000377387 DNA2P51530 1060 aa20.18■□□□□ 0.82
SF1-203ENST00000377387 TUBB4BP68371 445 aa20.18■□□□□ 0.82
SF1-203ENST00000377387 CALCRLQ16602 461 aa20.18■□□□□ 0.82
SF1-203ENST00000377387 CNNM4Q6P4Q7 775 aa20.18■□□□□ 0.82
SF1-203ENST00000377387 ZNF804AQ7Z570 1209 aa20.18■□□□□ 0.82
SF1-203ENST00000377387 SECISBP2LQ93073 1101 aaKnown RBP20.18■□□□□ 0.82
SF1-203ENST00000377387 MYH10P35580 1976 aa20.17■□□□□ 0.82
SF1-203ENST00000377387 CCDC88AQ3V6T2 1871 aa20.17■□□□□ 0.82
SF1-203ENST00000377387 F8W031 263 aaPredicted RBP20.17■□□□□ 0.82
SF1-203ENST00000377387 LDHCP07864 332 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms