RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 GPRC5DQ9NZD1 345 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 RABGAP1Q9Y3P9 1069 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 PCDHB6Q9Y5E3 794 aa9.43□□□□□ -0.9
CRNKL1-202ENST00000377340 MMP1P03956 469 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 PFKFB1P16118 471 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 SPAG1Q07617 926 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 PNOCQ13519 176 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 PRPF4BQ13523 1007 aaKnown RBP9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 CTTNQ14247 550 aaKnown RBP9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 APBB1IPQ7Z5R6 666 aaPredicted RBP9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 ERO1BQ86YB8 467 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 SCYL3Q8IZE3 742 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 TBC1D5Q92609 795 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 SYMPKQ92797 1274 aaKnown RBP9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 SH2D3AQ9BRG2 576 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 RTFDC1Q9BY42 306 aaPredicted RBP9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 SLC39A2Q9NP94 309 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 CPA4Q9UI42 421 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 FMN2Q9NZ56 1722 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 C16orf86Q6ZW13 317 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 FAM200AQ8TCP9 573 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 OXER1Q8TDS5 423 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 GJA10Q969M2 543 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 PARK7Q99497 189 aaKnown RBP9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 CSRNP2Q9H175 543 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 PRR12Q9ULL5 1215 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 PCDHA7Q9UN72 937 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 K7ENM7 598 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 EPB41P11171 864 aaKnown RBP9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 KRT5P13647 590 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 RDXP35241 583 aaKnown RBP9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 GJC1P36383 396 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 LIG4P49917 911 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 KIF23Q02241 960 aaPredicted RBP9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 POSTNQ15063 836 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 CERS5Q8N5B7 392 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 PIGOQ8TEQ8 1089 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 AGBL1Q96MI9 1066 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 NLRP4Q96MN2 994 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 EXOC7Q9UPT5 735 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 COBLO75128 1261 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 C6orf222P0C671 652 aaPredicted RBP9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 ZNF543Q08ER8 600 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 SBK1Q52WX2 424 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 ZNF354CQ86Y25 554 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 CDAN1Q8IWY9 1227 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 SRBD1Q8N5C6 995 aaKnown RBP9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 DPF2Q92785 391 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 ADPGKQ9BRR6 497 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 WDR11Q9BZH6 1224 aa9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 FOXP1Q9H334 677 aaPredicted RBP9.42□□□□□ -0.9
CRNKL1-202ENST00000377340 DYNC1LI2O43237 492 aaPredicted RBP9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 OSTNP61366 133 aa9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 ARHGAP4P98171 946 aa9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 ABI1Q8IZP0 508 aa9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 TRPM4Q8TD43 1214 aa9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 LPAR1Q92633 364 aa9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 OPTNQ96CV9 577 aa9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 RIOK1Q9BRS2 568 aaKnown RBP9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 DDX4Q9NQI0 724 aaKnown RBP9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 SHTN1A0MZ66 631 aa9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 WDR46O15213 610 aaKnown RBP9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 DLATP10515 647 aaKnown RBP9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 CD19P15391 556 aa9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 CETN2P41208 172 aa9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 LRMPQ12912 555 aa9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 WDR44Q5JSH3 913 aa9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 MFSD14CQ5VZR4 134 aa9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 APOBEC3HQ6NTF7 200 aaKnown RBP9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 TXLNBQ8N3L3 684 aa9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 NOC4LQ9BVI4 516 aaKnown RBP9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 GTPBP4Q9BZE4 634 aaKnown RBP9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 SLIT2O94813 1529 aa9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 SFI1A8K8P3 1242 aa9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 GUCY1A2P33402 732 aa9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 GRM4Q14833 912 aa9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 ADALQ6DHV7 355 aa9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 MIS18BP1Q6P0N0 1132 aa9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 NMRK2Q9NPI5 230 aa9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 IFNKQ9P0W0 207 aa9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 NYAP2Q9P242 653 aa9.41□□□□□ -0.9
CRNKL1-202ENST00000377340 HNRNPDLO14979 420 aaKnown RBP9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 CTNNA2P26232 953 aa9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 LRSAM1Q6UWE0 723 aa9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 RSPH3Q86UC2 560 aa9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 SLC51AQ86UW1 340 aa9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 GPRC5AQ8NFJ5 357 aa9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 NLRP7Q8WX94 980 aa9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 TMEM106CQ9BVX2 250 aa9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 CHD2O14647 1828 aaKnown RBP9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 KDM3AQ9Y4C1 1321 aa9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 POTEMA6NI47 508 aa9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 NR1I2O75469 434 aa9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 TXNP10599 105 aaKnown RBP9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 PFKFB3Q16875 520 aaPredicted RBP9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 FAM193BQ96PV7 902 aaPredicted RBP9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 BHMT2Q9H2M3 363 aa9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 PRDM5Q9NQX1 630 aaPredicted RBP9.4□□□□□ -0.9
CRNKL1-202ENST00000377340 ZNF215Q9UL58 517 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms