RNA–Protein interactions for RNA: ENST00000376893.7

SSX3-202, Transcript of SSX family member 3, humanhuman

TSL 2 BASIC

Gene SSX3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-202ENST00000376893 PCDHB10Q9UN67 800 aa7.4□□□□□ -1.22
SSX3-202ENST00000376893 APOBEC2Q9Y235 224 aaKnown RBP7.4□□□□□ -1.22
SSX3-202ENST00000376893 NPC1L1Q9UHC9 1359 aa7.4□□□□□ -1.22
SSX3-202ENST00000376893 SBF2Q86WG5 1849 aa7.4□□□□□ -1.23
SSX3-202ENST00000376893 RGPD3A6NKT7 1758 aaPredicted RBP7.39□□□□□ -1.23
SSX3-202ENST00000376893 RGPD4Q7Z3J3 1758 aa7.39□□□□□ -1.23
SSX3-202ENST00000376893 IGSF1Q8N6C5 1336 aa7.39□□□□□ -1.23
SSX3-202ENST00000376893 ZBTB42B2RXF5 422 aa7.39□□□□□ -1.23
SSX3-202ENST00000376893 K7ESF4 209 aa7.39□□□□□ -1.23
SSX3-202ENST00000376893 CAPN5O15484 640 aaPredicted RBP7.39□□□□□ -1.23
SSX3-202ENST00000376893 GDF9O60383 454 aa7.39□□□□□ -1.23
SSX3-202ENST00000376893 FBXO21O94952 628 aa7.39□□□□□ -1.23
SSX3-202ENST00000376893 FOSP01100 380 aaPredicted RBP7.39□□□□□ -1.23
SSX3-202ENST00000376893 BPIP17213 487 aa7.39□□□□□ -1.23
SSX3-202ENST00000376893 PLCG1P19174 1290 aa7.39□□□□□ -1.23
SSX3-202ENST00000376893 FLT3P36888 993 aa7.39□□□□□ -1.23
SSX3-202ENST00000376893 PPP2R2AP63151 447 aa7.39□□□□□ -1.23
SSX3-202ENST00000376893 GABREP78334 506 aa7.39□□□□□ -1.23
SSX3-202ENST00000376893 SV2CQ496J9 727 aa7.39□□□□□ -1.23
SSX3-202ENST00000376893 MAP1SQ66K74 1059 aaPredicted RBP7.39□□□□□ -1.23
SSX3-202ENST00000376893 BTAF1O14981 1849 aa7.38□□□□□ -1.23
SSX3-202ENST00000376893 PAPPAQ13219 1627 aa7.38□□□□□ -1.23
SSX3-202ENST00000376893 PARD3Q8TEW0 1356 aa7.38□□□□□ -1.23
SSX3-202ENST00000376893 DCDC2BA2VCK2 349 aa7.38□□□□□ -1.23
SSX3-202ENST00000376893 GABRDO14764 452 aa7.38□□□□□ -1.23
SSX3-202ENST00000376893 WDHD1O75717 1129 aaPredicted RBP7.38□□□□□ -1.23
SSX3-202ENST00000376893 APBA3O96018 575 aa7.38□□□□□ -1.23
SSX3-202ENST00000376893 PABPC1P11940 636 aaKnown RBP7.38□□□□□ -1.23
SSX3-202ENST00000376893 RAPGEF1Q13905 1077 aa7.38□□□□□ -1.23
SSX3-202ENST00000376893 PKN3Q6P5Z2 889 aa7.38□□□□□ -1.23
SSX3-202ENST00000376893 KSR2Q6VAB6 950 aa7.38□□□□□ -1.23
SSX3-202ENST00000376893 CYFIP1Q7L576 1253 aa7.38□□□□□ -1.23
SSX3-202ENST00000376893 KIF18BQ86Y91 864 aa7.38□□□□□ -1.23
SSX3-202ENST00000376893 PLPPR2Q96GM1 343 aa7.38□□□□□ -1.23
SSX3-202ENST00000376893 ZNF512BQ96KM6 892 aaPredicted RBP7.38□□□□□ -1.23
SSX3-202ENST00000376893 SLC30A3Q99726 388 aa7.38□□□□□ -1.23
SSX3-202ENST00000376893 NAP1L4Q99733 375 aaKnown RBP7.38□□□□□ -1.23
SSX3-202ENST00000376893 YIPF4Q9BSR8 244 aa7.38□□□□□ -1.23
SSX3-202ENST00000376893 RHOBTB2Q9BYZ6 727 aa7.38□□□□□ -1.23
SSX3-202ENST00000376893 IRX2Q9BZI1 471 aaPredicted RBP7.38□□□□□ -1.23
SSX3-202ENST00000376893 MTFR1LQ9H019 292 aa7.38□□□□□ -1.23
SSX3-202ENST00000376893 IFT22Q9H7X7 185 aa7.38□□□□□ -1.23
SSX3-202ENST00000376893 SUSD2Q9UGT4 822 aa7.38□□□□□ -1.23
SSX3-202ENST00000376893 PCDHA4Q9UN74 947 aa7.38□□□□□ -1.23
SSX3-202ENST00000376893 CORINQ9Y5Q5 1042 aa7.38□□□□□ -1.23
SSX3-202ENST00000376893 BCL9O00512 1426 aa7.37□□□□□ -1.23
SSX3-202ENST00000376893 B4E1Z4 1266 aa7.37□□□□□ -1.23
SSX3-202ENST00000376893 DNAJA2O60884 412 aa7.37□□□□□ -1.23
SSX3-202ENST00000376893 F2P00734 622 aa7.37□□□□□ -1.23
SSX3-202ENST00000376893 HTR3AP46098 478 aa7.37□□□□□ -1.23
SSX3-202ENST00000376893 TMEM95Q3KNT9 176 aa7.37□□□□□ -1.23
SSX3-202ENST00000376893 YOD1Q5VVQ6 348 aaPredicted RBP7.37□□□□□ -1.23
SSX3-202ENST00000376893 CEP135Q66GS9 1140 aa7.37□□□□□ -1.23
SSX3-202ENST00000376893 MRPL14Q6P1L8 145 aaKnown RBP7.37□□□□□ -1.23
SSX3-202ENST00000376893 LRFN4Q6PJG9 635 aa7.37□□□□□ -1.23
SSX3-202ENST00000376893 SLC4A10Q6U841 1118 aa7.37□□□□□ -1.23
SSX3-202ENST00000376893 NSMFQ6X4W1 530 aa7.37□□□□□ -1.23
SSX3-202ENST00000376893 LHFPL2Q6ZUX7 228 aa7.37□□□□□ -1.23
SSX3-202ENST00000376893 GPBAR1Q8TDU6 330 aa7.37□□□□□ -1.23
SSX3-202ENST00000376893 HPS1Q92902 700 aa7.37□□□□□ -1.23
SSX3-202ENST00000376893 OSBP2Q969R2 916 aa7.37□□□□□ -1.23
SSX3-202ENST00000376893 ACSBG1Q96GR2 724 aa7.37□□□□□ -1.23
SSX3-202ENST00000376893 SMAD5Q99717 465 aaKnown RBP7.37□□□□□ -1.23
SSX3-202ENST00000376893 SLC13A1Q9BZW2 595 aa7.37□□□□□ -1.23
SSX3-202ENST00000376893 OBP2AQ9NY56 170 aa7.37□□□□□ -1.23
SSX3-202ENST00000376893 PLA2G2EQ9NZK7 142 aa7.37□□□□□ -1.23
SSX3-202ENST00000376893 TRHDEQ9UKU6 1024 aa7.37□□□□□ -1.23
SSX3-202ENST00000376893 PNMA2Q9UL42 364 aa7.37□□□□□ -1.23
SSX3-202ENST00000376893 KDM6AO15550 1401 aaPredicted RBP7.36□□□□□ -1.23
SSX3-202ENST00000376893 FAM177BA6PVY3 158 aa7.36□□□□□ -1.23
SSX3-202ENST00000376893 H7C1W4 665 aa7.36□□□□□ -1.23
SSX3-202ENST00000376893 J3QW42 95 aa7.36□□□□□ -1.23
SSX3-202ENST00000376893 THBS1P07996 1170 aa7.36□□□□□ -1.23
SSX3-202ENST00000376893 C6orf222P0C671 652 aaPredicted RBP7.36□□□□□ -1.23
SSX3-202ENST00000376893 PHKG2P15735 406 aa7.36□□□□□ -1.23
SSX3-202ENST00000376893 ZSCAN20P17040 1043 aaPredicted RBP7.36□□□□□ -1.23
SSX3-202ENST00000376893 IGFALSP35858 605 aa7.36□□□□□ -1.23
SSX3-202ENST00000376893 ZEB1P37275 1124 aaPredicted RBP7.36□□□□□ -1.23
SSX3-202ENST00000376893 CDK8P49336 464 aa7.36□□□□□ -1.23
SSX3-202ENST00000376893 MTHFSP49914 203 aa7.36□□□□□ -1.23
SSX3-202ENST00000376893 FAPQ12884 760 aa7.36□□□□□ -1.23
SSX3-202ENST00000376893 IKBKEQ14164 716 aa7.36□□□□□ -1.23
SSX3-202ENST00000376893 PCBP1Q15365 356 aaKnown RBP eCLIP7.36□□□□□ -1.23
SSX3-202ENST00000376893 BRAPQ7Z569 592 aa7.36□□□□□ -1.23
SSX3-202ENST00000376893 TEX2Q8IWB9 1127 aa7.36□□□□□ -1.23
SSX3-202ENST00000376893 SLFN12Q8IYM2 578 aa7.36□□□□□ -1.23
SSX3-202ENST00000376893 CNTD1Q8N815 330 aa7.36□□□□□ -1.23
SSX3-202ENST00000376893 JPH3Q8WXH2 748 aaPredicted RBP7.36□□□□□ -1.23
SSX3-202ENST00000376893 SLC7A3Q8WY07 619 aa7.36□□□□□ -1.23
SSX3-202ENST00000376893 USP7Q93009 1102 aa7.36□□□□□ -1.23
SSX3-202ENST00000376893 GAS2L1Q99501 681 aaPredicted RBP7.36□□□□□ -1.23
SSX3-202ENST00000376893 SARGQ9BW04 601 aa7.36□□□□□ -1.23
SSX3-202ENST00000376893 LUC7LQ9NQ29 371 aaKnown RBP7.36□□□□□ -1.23
SSX3-202ENST00000376893 CASS4Q9NQ75 786 aa7.36□□□□□ -1.23
SSX3-202ENST00000376893 SUCOQ9UBS9 1254 aaKnown RBP7.36□□□□□ -1.23
SSX3-202ENST00000376893 ANAPC4Q9UJX5 808 aa7.36□□□□□ -1.23
SSX3-202ENST00000376893 PNMA8BQ9ULN7 279 aaPredicted RBP7.36□□□□□ -1.23
SSX3-202ENST00000376893 KDRP35968 1356 aa7.35□□□□□ -1.23
SSX3-202ENST00000376893 PCDH11XQ9BZA7 1347 aa7.35□□□□□ -1.23
SSX3-202ENST00000376893 PCDH11YQ9BZA8 1340 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms