RNA–Protein interactions for RNA: ENST00000376745.8

PPP1CA-203, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CA, Length 1,476 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-203ENST00000376745 NCOA5Q9HCD5 579 aaKnown RBP38.35■■■■□ 3.73
PPP1CA-203ENST00000376745 V9GY48 417 aaPredicted RBP38.35■■■■□ 3.73
PPP1CA-203ENST00000376745 LCTP09848 1927 aa38.35■■■■□ 3.73
PPP1CA-203ENST00000376745 SYNGAP1Q96PV0 1343 aa38.35■■■■□ 3.73
PPP1CA-203ENST00000376745 RNF208Q9H0X6 261 aa38.35■■■■□ 3.73
PPP1CA-203ENST00000376745 PAK6Q9NQU5 681 aaPredicted RBP38.35■■■■□ 3.73
PPP1CA-203ENST00000376745 KIAA0100Q14667 2235 aaKnown RBP38.34■■■■□ 3.73
PPP1CA-203ENST00000376745 CALML3P27482 149 aa38.34■■■■□ 3.73
PPP1CA-203ENST00000376745 HMX1Q9NP08 348 aaPredicted RBP38.34■■■■□ 3.73
PPP1CA-203ENST00000376745 CYBAP13498 195 aa38.33■■■■□ 3.73
PPP1CA-203ENST00000376745 SAMD3Q8N6K7 520 aa38.33■■■■□ 3.73
PPP1CA-203ENST00000376745 SNAI1O95863 264 aaPredicted RBP38.32■■■■□ 3.72
PPP1CA-203ENST00000376745 IFNAR1P17181 557 aa38.32■■■■□ 3.72
PPP1CA-203ENST00000376745 HSD17B4P51659 736 aa38.32■■■■□ 3.72
PPP1CA-203ENST00000376745 TRPV1Q8NER1 839 aa38.32■■■■□ 3.72
PPP1CA-203ENST00000376745 SYTL5Q8TDW5 730 aaPredicted RBP38.32■■■■□ 3.72
PPP1CA-203ENST00000376745 TMEM106CQ9BVX2 250 aa38.32■■■■□ 3.72
PPP1CA-203ENST00000376745 MAP3K20Q9NYL2 800 aaKnown RBP38.32■■■■□ 3.72
PPP1CA-203ENST00000376745 NRBP1Q9UHY1 535 aa38.32■■■■□ 3.72
PPP1CA-203ENST00000376745 STK3Q13188 491 aa38.31■■■■□ 3.72
PPP1CA-203ENST00000376745 XRN2Q9H0D6 950 aaKnown RBP eCLIP38.31■■■■□ 3.72
PPP1CA-203ENST00000376745 PFKFB2O60825 505 aa38.3■■■■□ 3.72
PPP1CA-203ENST00000376745 GJB1P08034 283 aa38.3■■■■□ 3.72
PPP1CA-203ENST00000376745 CCND3P30281 292 aaPredicted RBP38.3■■■■□ 3.72
PPP1CA-203ENST00000376745 COL20A1Q9P218 1284 aa38.3■■■■□ 3.72
PPP1CA-203ENST00000376745 ADD3Q9UEY8 706 aaKnown RBP38.3■■■■□ 3.72
PPP1CA-203ENST00000376745 PRPF3O43395 683 aaKnown RBP38.29■■■■□ 3.72
PPP1CA-203ENST00000376745 CFBP00751 764 aa38.29■■■■□ 3.72
PPP1CA-203ENST00000376745 PRAMEF19Q5SWL8 479 aa38.29■■■■□ 3.72
PPP1CA-203ENST00000376745 ARMCX2Q7L311 632 aa38.29■■■■□ 3.72
PPP1CA-203ENST00000376745 RBBP6Q7Z6E9 1792 aaKnown RBP38.29■■■■□ 3.72
PPP1CA-203ENST00000376745 LOC102724159A0A0B4J2E5 919 aa38.28■■■■□ 3.72
PPP1CA-203ENST00000376745 ASB14A6NK59 587 aa38.28■■■■□ 3.72
PPP1CA-203ENST00000376745 SCRN1Q12765 414 aa38.28■■■■□ 3.72
PPP1CA-203ENST00000376745 PWP2Q15269 919 aaKnown RBP38.28■■■■□ 3.72
PPP1CA-203ENST00000376745 DNERQ8NFT8 737 aa38.28■■■■□ 3.72
PPP1CA-203ENST00000376745 MORC4Q8TE76 937 aa38.28■■■■□ 3.72
PPP1CA-203ENST00000376745 SLKQ9H2G2 1235 aaPredicted RBP38.28■■■■□ 3.72
PPP1CA-203ENST00000376745 POTEFA5A3E0 1075 aa38.28■■■■□ 3.72
PPP1CA-203ENST00000376745 ALDH5A1P51649 535 aaPredicted RBP38.28■■■■□ 3.72
PPP1CA-203ENST00000376745 RABEP1Q15276 862 aa38.28■■■■□ 3.72
PPP1CA-203ENST00000376745 WWC2Q6AWC2 1192 aa38.28■■■■□ 3.72
PPP1CA-203ENST00000376745 PHKBQ93100 1093 aa38.28■■■■□ 3.72
PPP1CA-203ENST00000376745 RNF26Q9BY78 433 aaPredicted RBP38.28■■■■□ 3.72
PPP1CA-203ENST00000376745 CDKN2AIPQ9NXV6 580 aaPredicted RBP38.28■■■■□ 3.72
PPP1CA-203ENST00000376745 ME3Q16798 604 aa38.27■■■■□ 3.72
PPP1CA-203ENST00000376745 HEATR3Q7Z4Q2 680 aa38.27■■■■□ 3.72
PPP1CA-203ENST00000376745 GPKOWQ92917 476 aaPredicted RBP eCLIP38.27■■■■□ 3.72
PPP1CA-203ENST00000376745 RBM27Q9P2N5 1060 aaKnown RBP38.27■■■■□ 3.72
PPP1CA-203ENST00000376745 ZNF865P0CJ78 1059 aaPredicted RBP38.26■■■■□ 3.72
PPP1CA-203ENST00000376745 PKN1Q16512 942 aa38.26■■■■□ 3.72
PPP1CA-203ENST00000376745 PFKFB3Q16875 520 aaPredicted RBP38.26■■■■□ 3.72
PPP1CA-203ENST00000376745 hCG_1984214I3L0E3 225 aa38.25■■■■□ 3.71
PPP1CA-203ENST00000376745 GJA8P48165 433 aa38.25■■■■□ 3.71
PPP1CA-203ENST00000376745 SOX10P56693 466 aa38.25■■■■□ 3.71
PPP1CA-203ENST00000376745 NOL8Q76FK4 1167 aaKnown RBP38.25■■■■□ 3.71
PPP1CA-203ENST00000376745 ZNF713Q8N859 430 aaPredicted RBP38.25■■■■□ 3.71
PPP1CA-203ENST00000376745 DEFB118Q96PH6 123 aa38.25■■■■□ 3.71
PPP1CA-203ENST00000376745 TAAR1Q96RJ0 339 aa38.25■■■■□ 3.71
PPP1CA-203ENST00000376745 KATNBL1Q9H079 304 aa38.25■■■■□ 3.71
PPP1CA-203ENST00000376745 CNPY2Q9Y2B0 182 aa38.25■■■■□ 3.71
PPP1CA-203ENST00000376745 MCM3APO60318 1980 aa38.24■■■■□ 3.71
PPP1CA-203ENST00000376745 GCOM1H8Y6P7 765 aaPredicted RBP38.24■■■■□ 3.71
PPP1CA-203ENST00000376745 LARGE1O95461 756 aa38.24■■■■□ 3.71
PPP1CA-203ENST00000376745 POLR2MP0CAP2 368 aa38.24■■■■□ 3.71
PPP1CA-203ENST00000376745 HOXA13P31271 388 aaPredicted RBP38.24■■■■□ 3.71
PPP1CA-203ENST00000376745 TYW1BQ6NUM6 668 aa38.24■■■■□ 3.71
PPP1CA-203ENST00000376745 ABHD16BQ9H3Z7 469 aa38.24■■■■□ 3.71
PPP1CA-203ENST00000376745 DDX49Q9Y6V7 483 aaKnown RBP38.24■■■■□ 3.71
PPP1CA-203ENST00000376745 CPLX1O14810 134 aa38.23■■■■□ 3.71
PPP1CA-203ENST00000376745 SCG2P13521 617 aa38.23■■■■□ 3.71
PPP1CA-203ENST00000376745 EDNRBP24530 442 aa38.23■■■■□ 3.71
PPP1CA-203ENST00000376745 IL27Q8NEV9 243 aa38.23■■■■□ 3.71
PPP1CA-203ENST00000376745 U2AF1L4Q8WU68 220 aaKnown RBP38.23■■■■□ 3.71
PPP1CA-203ENST00000376745 BARHL2Q9NY43 387 aa38.23■■■■□ 3.71
PPP1CA-203ENST00000376745 STXBP3O00186 592 aa38.22■■■■□ 3.71
PPP1CA-203ENST00000376745 PIK3CDO00329 1044 aa38.22■■■■□ 3.71
PPP1CA-203ENST00000376745 PPFIA3O75145 1194 aa38.22■■■■□ 3.71
PPP1CA-203ENST00000376745 SGPL1O95470 568 aa38.22■■■■□ 3.71
PPP1CA-203ENST00000376745 SLC26A6Q9BXS9 759 aa38.22■■■■□ 3.71
PPP1CA-203ENST00000376745 MEIS2O14770 477 aa38.22■■■■□ 3.71
PPP1CA-203ENST00000376745 SEPT4O43236 478 aa38.22■■■■□ 3.71
PPP1CA-203ENST00000376745 ACVR2BQ13705 512 aa38.22■■■■□ 3.71
PPP1CA-203ENST00000376745 LHX8Q68G74 356 aa38.22■■■■□ 3.71
PPP1CA-203ENST00000376745 PPP1R18Q6NYC8 613 aa38.22■■■■□ 3.71
PPP1CA-203ENST00000376745 CPLX2Q6PUV4 134 aaKnown RBP38.22■■■■□ 3.71
PPP1CA-203ENST00000376745 NSUN6Q8TEA1 469 aaKnown RBP38.22■■■■□ 3.71
PPP1CA-203ENST00000376745 CRISPLD2Q9H0B8 497 aa38.22■■■■□ 3.71
PPP1CA-203ENST00000376745 PSTPIP2Q9H939 334 aa38.22■■■■□ 3.71
PPP1CA-203ENST00000376745 LIMCH1Q9UPQ0 1083 aa38.22■■■■□ 3.71
PPP1CA-203ENST00000376745 CNGA1P29973 690 aa38.21■■■■□ 3.71
PPP1CA-203ENST00000376745 GTF3C6Q969F1 213 aa38.21■■■■□ 3.71
PPP1CA-203ENST00000376745 RMDN3Q96TC7 470 aa38.21■■■■□ 3.71
PPP1CA-203ENST00000376745 CAPN15O75808 1086 aa38.2■■■■□ 3.71
PPP1CA-203ENST00000376745 AKAP17AQ02040 695 aaKnown RBP38.2■■■■□ 3.71
PPP1CA-203ENST00000376745 DDX20Q9UHI6 824 aaKnown RBP38.2■■■■□ 3.71
PPP1CA-203ENST00000376745 EN2P19622 333 aaPredicted RBP38.19■■■■□ 3.7
PPP1CA-203ENST00000376745 USP17L6PQ6QN14 398 aa38.19■■■■□ 3.7
PPP1CA-203ENST00000376745 NECAB1Q8N987 351 aa38.19■■■■□ 3.7
PPP1CA-203ENST00000376745 SHISA4Q96DD7 197 aa38.19■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms