RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 BRDTQ58F21 947 aaPredicted RBP27.29■■□□□ 1.96
C9orf47-202ENST00000375850 AKNAD1Q5T1N1 836 aa27.29■■□□□ 1.96
C9orf47-202ENST00000375850 RPUSD2Q8IZ73 545 aaKnown RBP27.29■■□□□ 1.96
C9orf47-202ENST00000375850 GAS2L1Q99501 681 aaPredicted RBP27.29■■□□□ 1.96
C9orf47-202ENST00000375850 MSRAQ9UJ68 235 aa27.29■■□□□ 1.96
C9orf47-202ENST00000375850 CCDC171Q6TFL3 1326 aa27.29■■□□□ 1.96
C9orf47-202ENST00000375850 LRRC37A2A6NM11 1700 aa27.28■■□□□ 1.96
C9orf47-202ENST00000375850 GRIN2DO15399 1336 aa27.28■■□□□ 1.96
C9orf47-202ENST00000375850 RAD50Q92878 1312 aa27.28■■□□□ 1.96
C9orf47-202ENST00000375850 RBM47A0AV96 593 aaKnown RBP27.28■■□□□ 1.96
C9orf47-202ENST00000375850 PTPDC1A2A3K4 754 aa27.28■■□□□ 1.96
C9orf47-202ENST00000375850 NFIBO00712 420 aa27.28■■□□□ 1.96
C9orf47-202ENST00000375850 NKRFO15226 690 aaKnown RBP eCLIP27.28■■□□□ 1.96
C9orf47-202ENST00000375850 ACRP10323 421 aa27.28■■□□□ 1.96
C9orf47-202ENST00000375850 ZNF543Q08ER8 600 aa27.28■■□□□ 1.96
C9orf47-202ENST00000375850 DNERQ8NFT8 737 aa27.28■■□□□ 1.96
C9orf47-202ENST00000375850 CRBNQ96SW2 442 aa27.28■■□□□ 1.96
C9orf47-202ENST00000375850 NOC4LQ9BVI4 516 aaKnown RBP27.28■■□□□ 1.96
C9orf47-202ENST00000375850 WDR11Q9BZH6 1224 aa27.28■■□□□ 1.96
C9orf47-202ENST00000375850 GPCPD1Q9NPB8 672 aa27.28■■□□□ 1.96
C9orf47-202ENST00000375850 FRMPD2Q68DX3 1309 aaPredicted RBP27.27■■□□□ 1.96
C9orf47-202ENST00000375850 SNHG28P0DPA3 235 aa27.27■■□□□ 1.96
C9orf47-202ENST00000375850 CCDC178Q5BJE1 867 aa27.27■■□□□ 1.96
C9orf47-202ENST00000375850 GPATCH4Q5T3I0 446 aaKnown RBP27.27■■□□□ 1.96
C9orf47-202ENST00000375850 RNF207Q6ZRF8 634 aa27.27■■□□□ 1.96
C9orf47-202ENST00000375850 TRIM6-TRIM34B2RNG4 842 aa27.26■■□□□ 1.95
C9orf47-202ENST00000375850 B4GALT4O60513 344 aa27.26■■□□□ 1.95
C9orf47-202ENST00000375850 PFKMP08237 780 aa27.26■■□□□ 1.95
C9orf47-202ENST00000375850 NMIQ13287 307 aaPredicted RBP27.26■■□□□ 1.95
C9orf47-202ENST00000375850 CLEC4DQ8WXI8 215 aa27.26■■□□□ 1.95
C9orf47-202ENST00000375850 ESR2Q92731 530 aa27.26■■□□□ 1.95
C9orf47-202ENST00000375850 ALDH8A1Q9H2A2 487 aaPredicted RBP27.26■■□□□ 1.95
C9orf47-202ENST00000375850 GPHNQ9NQX3 736 aaPredicted RBP27.26■■□□□ 1.95
C9orf47-202ENST00000375850 KPNA6O60684 536 aa27.25■■□□□ 1.95
C9orf47-202ENST00000375850 PDE4DQ08499 809 aa27.25■■□□□ 1.95
C9orf47-202ENST00000375850 ZNF589Q86UQ0 364 aaPredicted RBP27.25■■□□□ 1.95
C9orf47-202ENST00000375850 DGKHQ86XP1 1220 aa27.25■■□□□ 1.95
C9orf47-202ENST00000375850 RGS22Q8NE09 1264 aa27.25■■□□□ 1.95
C9orf47-202ENST00000375850 PURBQ96QR8 312 aaKnown RBP27.25■■□□□ 1.95
C9orf47-202ENST00000375850 TRPV6Q9H1D0 765 aa27.25■■□□□ 1.95
C9orf47-202ENST00000375850 DDX49Q9Y6V7 483 aaKnown RBP27.25■■□□□ 1.95
C9orf47-202ENST00000375850 CALML3P27482 149 aa27.24■■□□□ 1.95
C9orf47-202ENST00000375850 SCFD2Q8WU76 684 aa27.24■■□□□ 1.95
C9orf47-202ENST00000375850 MTG1Q9BT17 334 aaPredicted RBP27.24■■□□□ 1.95
C9orf47-202ENST00000375850 CDH23Q9H251 3354 aa27.23■■□□□ 1.95
C9orf47-202ENST00000375850 EDNRBP24530 442 aa27.23■■□□□ 1.95
C9orf47-202ENST00000375850 PBX2P40425 430 aa27.23■■□□□ 1.95
C9orf47-202ENST00000375850 HAND2P61296 217 aa27.23■■□□□ 1.95
C9orf47-202ENST00000375850 PSMC6P62333 389 aa27.23■■□□□ 1.95
C9orf47-202ENST00000375850 PURAQ00577 322 aaKnown RBP27.23■■□□□ 1.95
C9orf47-202ENST00000375850 PPP2R5BQ15173 497 aa27.23■■□□□ 1.95
C9orf47-202ENST00000375850 SLC30A10Q6XR72 485 aa27.23■■□□□ 1.95
C9orf47-202ENST00000375850 GRXCR1A8MXD5 290 aa27.22■■□□□ 1.95
C9orf47-202ENST00000375850 CCL23P55773 120 aa27.22■■□□□ 1.95
C9orf47-202ENST00000375850 RPS6P62753 249 aaKnown RBP27.22■■□□□ 1.95
C9orf47-202ENST00000375850 IQCA1Q86XH1 822 aa27.22■■□□□ 1.95
C9orf47-202ENST00000375850 OR6J1Q8NGC5 347 aa27.22■■□□□ 1.95
C9orf47-202ENST00000375850 RILPL2Q969X0 211 aa27.22■■□□□ 1.95
C9orf47-202ENST00000375850 LNPKQ9C0E8 428 aa27.22■■□□□ 1.95
C9orf47-202ENST00000375850 WNT8AQ9H1J5 351 aa27.22■■□□□ 1.95
C9orf47-202ENST00000375850 RWDD1Q9H446 243 aaPredicted RBP27.22■■□□□ 1.95
C9orf47-202ENST00000375850 SLC28A3Q9HAS3 691 aa27.22■■□□□ 1.95
C9orf47-202ENST00000375850 UMODL1Q5DID0 1318 aa27.21■■□□□ 1.95
C9orf47-202ENST00000375850 EYSQ5T1H1 3165 aa27.21■■□□□ 1.95
C9orf47-202ENST00000375850 ZNF213O14771 459 aa27.21■■□□□ 1.95
C9orf47-202ENST00000375850 TJAP1Q5JTD0 557 aa27.21■■□□□ 1.95
C9orf47-202ENST00000375850 TMEM63BQ5T3F8 832 aa27.21■■□□□ 1.95
C9orf47-202ENST00000375850 SMC5Q8IY18 1101 aa27.21■■□□□ 1.95
C9orf47-202ENST00000375850 CXXC1Q9P0U4 656 aaPredicted RBP27.21■■□□□ 1.95
C9orf47-202ENST00000375850 SLC4A7Q9Y6M7 1214 aa27.21■■□□□ 1.95
C9orf47-202ENST00000375850 TNKSO95271 1327 aa27.2■■□□□ 1.95
C9orf47-202ENST00000375850 MYL3P08590 195 aa27.2■■□□□ 1.94
C9orf47-202ENST00000375850 SDSP20132 328 aa27.2■■□□□ 1.94
C9orf47-202ENST00000375850 PTGS1P23219 599 aa27.2■■□□□ 1.94
C9orf47-202ENST00000375850 PTPN11Q06124 597 aaPredicted RBP27.2■■□□□ 1.94
C9orf47-202ENST00000375850 OTOP2Q7RTS6 562 aa27.2■■□□□ 1.94
C9orf47-202ENST00000375850 TBC1D10CQ8IV04 446 aa27.2■■□□□ 1.94
C9orf47-202ENST00000375850 OSBPL3Q9H4L5 887 aa27.2■■□□□ 1.94
C9orf47-202ENST00000375850 A6NJR5 290 aa27.19■■□□□ 1.94
C9orf47-202ENST00000375850 HIP1O00291 1037 aa27.19■■□□□ 1.94
C9orf47-202ENST00000375850 RFC2P35250 354 aa27.19■■□□□ 1.94
C9orf47-202ENST00000375850 NFRKBQ6P4R8 1299 aa27.19■■□□□ 1.94
C9orf47-202ENST00000375850 PRDM12Q9H4Q4 367 aa27.19■■□□□ 1.94
C9orf47-202ENST00000375850 LCTP09848 1927 aa27.18■■□□□ 1.94
C9orf47-202ENST00000375850 TTLL4Q14679 1199 aa27.18■■□□□ 1.94
C9orf47-202ENST00000375850 USP38Q8NB14 1042 aa27.17■■□□□ 1.94
C9orf47-202ENST00000375850 ATXN2LQ8WWM7 1075 aaKnown RBP27.17■■□□□ 1.94
C9orf47-202ENST00000375850 ANKS1AQ92625 1134 aa27.17■■□□□ 1.94
C9orf47-202ENST00000375850 TRMT13Q9NUP7 481 aaKnown RBP27.17■■□□□ 1.94
C9orf47-202ENST00000375850 PCDHA11Q9Y5I1 949 aa27.17■■□□□ 1.94
C9orf47-202ENST00000375850 ABCB11O95342 1321 aa27.16■■□□□ 1.94
C9orf47-202ENST00000375850 NEDD4P46934 1319 aa27.16■■□□□ 1.94
C9orf47-202ENST00000375850 PRUNE2Q8WUY3 3088 aa27.16■■□□□ 1.94
C9orf47-202ENST00000375850 PITPNM1O00562 1244 aa27.16■■□□□ 1.94
C9orf47-202ENST00000375850 TXNP10599 105 aaKnown RBP27.16■■□□□ 1.94
C9orf47-202ENST00000375850 ACTN1P12814 892 aa27.16■■□□□ 1.94
C9orf47-202ENST00000375850 ASPRV1Q53RT3 343 aa27.16■■□□□ 1.94
C9orf47-202ENST00000375850 CHD1LQ86WJ1 897 aa27.16■■□□□ 1.94
C9orf47-202ENST00000375850 MCF2L2Q86YR7 1114 aa27.16■■□□□ 1.94
C9orf47-202ENST00000375850 PNMA1Q8ND90 353 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms