RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 AK2P54819 239 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 GNG11P61952 73 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 ODR4Q5SWX8 454 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 FOXR1Q6PIV2 292 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 MMS22LQ6ZRQ5 1243 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 MFSD6Q6ZSS7 791 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 NUDT18Q6ZVK8 323 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 C11orf96Q7Z7L8 435 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 CAMKK1Q8N5S9 505 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 IL1RAPL2Q9NP60 686 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 A0A1B0GW55 424 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 RASGRF2O14827 1237 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 DUX4L2P0CJ85 424 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 DUX4L3P0CJ86 424 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 DUX4L4P0CJ87 422 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 DUX4L5P0CJ88 424 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 DUX4L6P0CJ89 424 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 DUX4L7P0CJ90 424 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 CES1P23141 567 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 PTPREP23469 700 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 AP1S2P56377 157 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 CAV3P56539 151 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 OLFML2AQ68BL7 652 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 CCSAPQ6IQ19 270 aaPredicted RBP5.04□□□□□ -1.6
SCN1A-202ENST00000375405 ARMC6Q6NXE6 501 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 TRAF7Q6Q0C0 670 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 P3H4Q92791 437 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 KLHL31Q9H511 634 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 DUX4Q9UBX2 424 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 NFIBO00712 420 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 EPB41P11171 864 aaKnown RBP5.04□□□□□ -1.6
SCN1A-202ENST00000375405 KRT76Q01546 638 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 LRRC74AQ0VAA2 488 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 LBRQ14739 615 aaKnown RBP5.04□□□□□ -1.6
SCN1A-202ENST00000375405 METTL21CQ5VZV1 264 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 NDUFAF2Q8N183 169 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 AOPEPQ8N6M6 819 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 SHCBP1Q8NEM2 672 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 BOLA2Q9H3K6 86 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 CCDC18Q5T9S5 1454 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 RFX3P48380 749 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 ATP12AP54707 1039 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 RAD51AP2Q09MP3 1159 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 KRT32Q14532 448 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 ULK3Q6PHR2 472 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 SIX6OS1Q8N1H7 587 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 USP6NLQ92738 828 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 EXOC4Q96A65 974 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 MFSD1Q9H3U5 465 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 VPS37BQ9H9H4 285 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 PEX14O75381 377 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 ASMTLO95671 621 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 ADCY7P51828 1080 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 NFIAQ12857 509 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 ANKS6Q68DC2 871 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 LRRC8BQ6P9F7 803 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 DPP9Q86TI2 863 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 INTS4Q96HW7 963 aaKnown RBP5.04□□□□□ -1.6
SCN1A-202ENST00000375405 MPP4Q96JB8 637 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 TMEM161AQ9NX61 479 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 COQ6Q9Y2Z9 468 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 SCINQ9Y6U3 715 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 RHOBTB1O94844 696 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 TNNI1P19237 187 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 MAGEA9P43362 315 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 RPS6KA3P51812 740 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 SPAG1Q07617 926 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 KIF19Q2TAC6 998 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 CHD1LQ86WJ1 897 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 SPATA18Q8TC71 538 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 TMEM106CQ9BVX2 250 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 THEGQ9P2T0 379 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 CNTLNQ9NXG0 1405 aa5.04□□□□□ -1.6
SCN1A-202ENST00000375405 LRRC14BA6NHZ5 514 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 UBAP1LF5GYI3 381 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 MYO1CO00159 1063 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 DNAJC6O75061 913 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 KRT37O76014 449 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 ADCY5O95622 1261 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 ICA1Q05084 483 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 PTGDRQ13258 359 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 ICE2Q659A1 982 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 TTC23LQ6PF05 361 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 BNIPLQ7Z465 357 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 METTL23Q86XA0 190 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 ATP11CQ8NB49 1132 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 CHAMP1Q96JM3 812 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 BBS2Q9BXC9 721 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 SPZ1Q9BXG8 430 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 PAIP1Q9H074 479 aaKnown RBP5.03□□□□□ -1.6
SCN1A-202ENST00000375405 CAAP1Q9H8G2 361 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 SARS2Q9NP81 518 aaKnown RBP5.03□□□□□ -1.6
SCN1A-202ENST00000375405 MIS18AQ9NYP9 233 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 MYO1AQ9UBC5 1043 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 KRT14P02533 472 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 ANXA13P27216 316 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 GJA8P48165 433 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 NPY2RP49146 381 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 CNGA2Q16280 664 aa5.03□□□□□ -1.6
SCN1A-202ENST00000375405 TBC1D10BQ4KMP7 808 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms