RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 RABGEF1Q9UJ41 708 aa7.19□□□□□ -1.26
UBR4-204ENST00000375254 CHMLP26374 656 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 PPP2R5DQ14738 602 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 LUZP2Q86TE4 346 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 DMPKQ09013 629 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 GIPC2Q8TF65 315 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 HACD3Q9P035 362 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 NONOQ15233 471 aaKnown RBP eCLIP7.18□□□□□ -1.26
UBR4-204ENST00000375254 NECAB1Q8N987 351 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 ZNF229Q9UJW7 825 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 SOS1Q07889 1333 aaPredicted RBP7.18□□□□□ -1.26
UBR4-204ENST00000375254 MAGEA8P43361 318 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 MGARPQ8TDB4 240 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.18□□□□□ -1.26
UBR4-204ENST00000375254 CALUO43852 315 aaPredicted RBP7.18□□□□□ -1.26
UBR4-204ENST00000375254 CARSP49589 748 aaKnown RBP7.18□□□□□ -1.26
UBR4-204ENST00000375254 CTTNQ14247 550 aaKnown RBP7.18□□□□□ -1.26
UBR4-204ENST00000375254 BRF1Q92994 677 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 MAGOHBQ96A72 148 aaKnown RBP7.18□□□□□ -1.26
UBR4-204ENST00000375254 ATP6V1G3Q96LB4 118 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 NR1H4Q96RI1 486 aaPredicted RBP7.18□□□□□ -1.26
UBR4-204ENST00000375254 IL1RAPL2Q9NP60 686 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 KIF24Q5T7B8 1368 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 CCDC188H7C350 402 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 KRT38O76015 456 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 KLHL2O95198 593 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 ACTN1P12814 892 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 CCDC82Q8N4S0 544 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 BPIFA3Q9BQP9 254 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 CNNM1Q9NRU3 951 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 KRT27Q7Z3Y8 459 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 SPATA21Q7Z572 469 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 PASD1Q8IV76 773 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 ATP11CQ8NB49 1132 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 DGCR14Q96DF8 476 aaKnown RBP7.18□□□□□ -1.26
UBR4-204ENST00000375254 CHAMP1Q96JM3 812 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 TEX12Q9BXU0 123 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 VPS37BQ9H9H4 285 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 FHOD3Q2V2M9 1422 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 TBCCQ15814 346 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 SEPT1Q8WYJ6 367 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 ANKIB1Q9P2G1 1089 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 AGTPBP1Q9UPW5 1226 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 KRT16P08779 473 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 RGS2P41220 211 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 VPS50Q96JG6 964 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 FMO2Q99518 471 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 ATXN10Q9UBB4 475 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 CAPN9O14815 690 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 GHRP10912 638 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 IL12RB1P42701 662 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 WTAPQ15007 396 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 ZNF444Q8N0Y2 327 aaPredicted RBP7.18□□□□□ -1.26
UBR4-204ENST00000375254 COMMD3-BMI1R4GMX3 469 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 ADSLP30566 484 aaPredicted RBP7.18□□□□□ -1.26
UBR4-204ENST00000375254 CCDC103Q8IW40 242 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 CDKL2Q92772 493 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 TTC25Q96NG3 672 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 ZMYND12Q9H0C1 365 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 PRELID1Q9Y255 219 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 ATP8A1Q9Y2Q0 1164 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 SRRM3A6NNA2 597 aaPredicted RBP7.18□□□□□ -1.26
UBR4-204ENST00000375254 LSP1P33241 339 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 NSFP46459 744 aaKnown RBP7.18□□□□□ -1.26
UBR4-204ENST00000375254 AK2P54819 239 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 CREB3L3Q68CJ9 461 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 STX12Q86Y82 276 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 SKA1Q96BD8 255 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 PFKFB2O60825 505 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 TRADDQ15628 312 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 FAM81BQ96LP2 452 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 FANCEQ9HB96 536 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 TIMMDC1Q9NPL8 285 aa7.18□□□□□ -1.26
UBR4-204ENST00000375254 RAD21O60216 631 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 GRIN1Q05586 938 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 IMPG2Q9BZV3 1241 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 MMADHCQ9H3L0 296 aaPredicted RBP7.17□□□□□ -1.26
UBR4-204ENST00000375254 MTO1Q9Y2Z2 717 aaKnown RBP7.17□□□□□ -1.26
UBR4-204ENST00000375254 GRID2IPA4D2P6 1211 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 PREPLQ4J6C6 727 aaPredicted RBP7.17□□□□□ -1.26
UBR4-204ENST00000375254 KRT39Q6A163 491 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 CYB5D1Q6P9G0 228 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 RBBP8NLQ8NC74 664 aaPredicted RBP7.17□□□□□ -1.26
UBR4-204ENST00000375254 NOD2Q9HC29 1040 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 GOLGA8TH3BQL2 631 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 GOLGA8HP0CJ92 632 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 KIF11P52732 1056 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 EPS8Q12929 822 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 FHDC1Q9C0D6 1143 aaPredicted RBP7.17□□□□□ -1.26
UBR4-204ENST00000375254 ING2Q9H160 280 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 RSL24D1Q9UHA3 163 aaKnown RBP7.17□□□□□ -1.26
UBR4-204ENST00000375254 ANO9A1A5B4 782 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 LRMPQ12912 555 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 HPS1Q92902 700 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 DCLRE1BQ9H816 532 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 PDE6AP16499 860 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 ROPN1BQ9BZX4 212 aaPredicted RBP7.17□□□□□ -1.26
UBR4-204ENST00000375254 ROPN1Q9HAT0 212 aaPredicted RBP7.17□□□□□ -1.26
UBR4-204ENST00000375254 GNGT2O14610 69 aa7.17□□□□□ -1.26
UBR4-204ENST00000375254 IL10P22301 178 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms