RNA–Protein interactions for RNA: ENST00000374982.5

HLA-DRA-201, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

BASIC

Gene HLA-DRA, Length 1,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-201ENST00000374982 MYO7AQ13402 2215 aa12.21□□□□□ -0.45
HLA-DRA-201ENST00000374982 DMXL1Q9Y485 3027 aa12.21□□□□□ -0.45
HLA-DRA-201ENST00000374982 POLR3DP05423 398 aaPredicted RBP12.21□□□□□ -0.45
HLA-DRA-201ENST00000374982 KCNA4P22459 653 aa12.21□□□□□ -0.45
HLA-DRA-201ENST00000374982 HYAL1Q12794 435 aa12.21□□□□□ -0.45
HLA-DRA-201ENST00000374982 PUM1Q14671 1186 aaKnown RBP eCLIP12.21□□□□□ -0.45
HLA-DRA-201ENST00000374982 CBX2Q14781 532 aaPredicted RBP12.21□□□□□ -0.45
HLA-DRA-201ENST00000374982 ST3GAL2Q16842 350 aa12.21□□□□□ -0.45
HLA-DRA-201ENST00000374982 CPXCR1Q8N123 301 aa12.21□□□□□ -0.45
HLA-DRA-201ENST00000374982 SAMD11Q96NU1 681 aa12.21□□□□□ -0.45
HLA-DRA-201ENST00000374982 PIH1D3Q9NQM4 214 aaKnown RBP12.21□□□□□ -0.45
HLA-DRA-201ENST00000374982 POLR3EQ9NVU0 708 aa12.21□□□□□ -0.45
HLA-DRA-201ENST00000374982 DDX49Q9Y6V7 483 aaKnown RBP12.21□□□□□ -0.45
HLA-DRA-201ENST00000374982 VPS13AQ96RL7 3174 aa12.21□□□□□ -0.46
HLA-DRA-201ENST00000374982 LCTP09848 1927 aa12.21□□□□□ -0.46
HLA-DRA-201ENST00000374982 NCOR2Q9Y618 2525 aa12.2□□□□□ -0.46
HLA-DRA-201ENST00000374982 PTPRCP08575 1304 aa12.2□□□□□ -0.46
HLA-DRA-201ENST00000374982 ABHD14A-ACY1A0A1B0GW23 586 aa12.2□□□□□ -0.46
HLA-DRA-201ENST00000374982 LINC01565O15544 149 aa12.2□□□□□ -0.46
HLA-DRA-201ENST00000374982 MYL3P08590 195 aa12.2□□□□□ -0.46
HLA-DRA-201ENST00000374982 CERS3Q8IU89 383 aa12.2□□□□□ -0.46
HLA-DRA-201ENST00000374982 WDR63Q8IWG1 891 aa12.2□□□□□ -0.46
HLA-DRA-201ENST00000374982 MRPL50Q8N5N7 158 aaKnown RBP12.2□□□□□ -0.46
HLA-DRA-201ENST00000374982 SP7Q8TDD2 431 aaPredicted RBP12.2□□□□□ -0.46
HLA-DRA-201ENST00000374982 AFAP1L1Q8TED9 768 aa12.2□□□□□ -0.46
HLA-DRA-201ENST00000374982 SLF1Q9BQI6 1058 aa12.2□□□□□ -0.46
HLA-DRA-201ENST00000374982 ATP2A1O14983 1001 aa12.19□□□□□ -0.46
HLA-DRA-201ENST00000374982 RAD21O60216 631 aa12.19□□□□□ -0.46
HLA-DRA-201ENST00000374982 NBNO60934 754 aa12.19□□□□□ -0.46
HLA-DRA-201ENST00000374982 CXCL10P02778 98 aa12.19□□□□□ -0.46
HLA-DRA-201ENST00000374982 AKR1B1P15121 316 aa12.19□□□□□ -0.46
HLA-DRA-201ENST00000374982 GTF2F1P35269 517 aaKnown RBP eCLIP12.19□□□□□ -0.46
HLA-DRA-201ENST00000374982 HTRA4P83105 476 aaPredicted RBP12.19□□□□□ -0.46
HLA-DRA-201ENST00000374982 IQSEC1Q6DN90 963 aa12.19□□□□□ -0.46
HLA-DRA-201ENST00000374982 TAPT1Q6NXT6 567 aa12.19□□□□□ -0.46
HLA-DRA-201ENST00000374982 NFRKBQ6P4R8 1299 aa12.19□□□□□ -0.46
HLA-DRA-201ENST00000374982 LRRC8DQ7L1W4 858 aa12.19□□□□□ -0.46
HLA-DRA-201ENST00000374982 EEPD1Q7L9B9 569 aa12.19□□□□□ -0.46
HLA-DRA-201ENST00000374982 FBXO16Q8IX29 292 aaPredicted RBP12.19□□□□□ -0.46
HLA-DRA-201ENST00000374982 TMEM105Q8N8V8 129 aa12.19□□□□□ -0.46
HLA-DRA-201ENST00000374982 FAM133AQ8N9E0 248 aa12.19□□□□□ -0.46
HLA-DRA-201ENST00000374982 RIPOR3Q96MK2 946 aa12.19□□□□□ -0.46
HLA-DRA-201ENST00000374982 MTG1Q9BT17 334 aaPredicted RBP12.19□□□□□ -0.46
HLA-DRA-201ENST00000374982 RAVER2Q9HCJ3 691 aaKnown RBP12.19□□□□□ -0.46
HLA-DRA-201ENST00000374982 RALYQ9UKM9 306 aaKnown RBP12.19□□□□□ -0.46
HLA-DRA-201ENST00000374982 NOD1Q9Y239 953 aa12.19□□□□□ -0.46
HLA-DRA-201ENST00000374982 TPRP12270 2363 aaKnown RBP12.19□□□□□ -0.46
HLA-DRA-201ENST00000374982 ASB14A6NK59 587 aa12.18□□□□□ -0.46
HLA-DRA-201ENST00000374982 EFCAB14O75071 495 aa12.18□□□□□ -0.46
HLA-DRA-201ENST00000374982 EYA4O95677 639 aa12.18□□□□□ -0.46
HLA-DRA-201ENST00000374982 EEF2P13639 858 aaKnown RBP12.18□□□□□ -0.46
HLA-DRA-201ENST00000374982 SELPP16109 830 aa12.18□□□□□ -0.46
HLA-DRA-201ENST00000374982 ZAP70P43403 619 aa12.18□□□□□ -0.46
HLA-DRA-201ENST00000374982 IKBKEQ14164 716 aa12.18□□□□□ -0.46
HLA-DRA-201ENST00000374982 TTC39AQ5SRH9 613 aa12.18□□□□□ -0.46
HLA-DRA-201ENST00000374982 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.18□□□□□ -0.46
HLA-DRA-201ENST00000374982 FBXO11Q86XK2 927 aa12.18□□□□□ -0.46
HLA-DRA-201ENST00000374982 TMEM192Q8IY95 271 aa12.18□□□□□ -0.46
HLA-DRA-201ENST00000374982 KIAA2013Q8IYS2 634 aa12.18□□□□□ -0.46
HLA-DRA-201ENST00000374982 CCDC155Q8N6L0 562 aa12.18□□□□□ -0.46
HLA-DRA-201ENST00000374982 CAGE1Q8TC20 777 aa12.18□□□□□ -0.46
HLA-DRA-201ENST00000374982 MSLNLQ96KJ4 702 aa12.18□□□□□ -0.46
HLA-DRA-201ENST00000374982 NUP88Q99567 741 aaPredicted RBP12.18□□□□□ -0.46
HLA-DRA-201ENST00000374982 GOPCQ9HD26 462 aa12.18□□□□□ -0.46
HLA-DRA-201ENST00000374982 FBXO40Q9UH90 709 aa12.18□□□□□ -0.46
HLA-DRA-201ENST00000374982 U3KPZ7 1027 aaPredicted RBP12.18□□□□□ -0.46
HLA-DRA-201ENST00000374982 CFAP47Q6ZTR5 3102 aa12.18□□□□□ -0.46
HLA-DRA-201ENST00000374982 IGSF3O75054 1194 aa12.17□□□□□ -0.46
HLA-DRA-201ENST00000374982 ICAM3P32942 547 aa12.17□□□□□ -0.46
HLA-DRA-201ENST00000374982 PTPN21Q16825 1174 aa12.17□□□□□ -0.46
HLA-DRA-201ENST00000374982 CHST13Q8NET6 341 aa12.17□□□□□ -0.46
HLA-DRA-201ENST00000374982 CTAGE1Q96RT6 745 aa12.17□□□□□ -0.46
HLA-DRA-201ENST00000374982 IGFLR1Q9H665 355 aa12.17□□□□□ -0.46
HLA-DRA-201ENST00000374982 GPHNQ9NQX3 736 aaPredicted RBP12.17□□□□□ -0.46
HLA-DRA-201ENST00000374982 MCM9Q9NXL9 1143 aa12.17□□□□□ -0.46
HLA-DRA-201ENST00000374982 SALL2Q9Y467 1007 aaPredicted RBP12.17□□□□□ -0.46
HLA-DRA-201ENST00000374982 BAZ2AQ9UIF9 1905 aaKnown RBP12.17□□□□□ -0.46
HLA-DRA-201ENST00000374982 GREB1LQ9C091 1923 aaPredicted RBP12.16□□□□□ -0.46
HLA-DRA-201ENST00000374982 IDH1O75874 414 aaKnown RBP12.16□□□□□ -0.46
HLA-DRA-201ENST00000374982 PARNO95453 639 aaKnown RBP12.16□□□□□ -0.46
HLA-DRA-201ENST00000374982 CYP2D6P10635 497 aa12.16□□□□□ -0.46
HLA-DRA-201ENST00000374982 NDUFV1P49821 464 aa12.16□□□□□ -0.46
HLA-DRA-201ENST00000374982 CPT1AP50416 773 aa12.16□□□□□ -0.46
HLA-DRA-201ENST00000374982 RRP1P56182 461 aaKnown RBP12.16□□□□□ -0.46
HLA-DRA-201ENST00000374982 PTPN11Q06124 597 aaPredicted RBP12.16□□□□□ -0.46
HLA-DRA-201ENST00000374982 ADAM15Q13444 863 aa12.16□□□□□ -0.46
HLA-DRA-201ENST00000374982 PTGISQ16647 500 aa12.16□□□□□ -0.46
HLA-DRA-201ENST00000374982 DUSP28Q4G0W2 176 aa12.16□□□□□ -0.46
HLA-DRA-201ENST00000374982 KIAA1211Q6ZU35 1233 aa12.16□□□□□ -0.46
HLA-DRA-201ENST00000374982 MYOCDQ8IZQ8 938 aa12.16□□□□□ -0.46
HLA-DRA-201ENST00000374982 SMRP1Q8NCR6 262 aa12.16□□□□□ -0.46
HLA-DRA-201ENST00000374982 DHX38Q92620 1227 aaKnown RBP12.16□□□□□ -0.46
HLA-DRA-201ENST00000374982 DYNLL2Q96FJ2 89 aa12.16□□□□□ -0.46
HLA-DRA-201ENST00000374982 RPGRIP1Q96KN7 1286 aa12.16□□□□□ -0.46
HLA-DRA-201ENST00000374982 INCENPQ9NQS7 918 aa12.16□□□□□ -0.46
HLA-DRA-201ENST00000374982 HOMER2Q9NSB8 354 aa12.16□□□□□ -0.46
HLA-DRA-201ENST00000374982 DLL3Q9NYJ7 618 aa12.16□□□□□ -0.46
HLA-DRA-201ENST00000374982 SWAP70Q9UH65 585 aa12.16□□□□□ -0.46
HLA-DRA-201ENST00000374982 ACACBO00763 2458 aa12.16□□□□□ -0.46
HLA-DRA-201ENST00000374982 PKD1L2Q7Z442 2459 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms