RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 CLIC4Q9Y696 253 aa19.67■□□□□ 0.74
HLA-DMA-201ENST00000374843 SMCHD1A6NHR9 2005 aa19.66■□□□□ 0.74
HLA-DMA-201ENST00000374843 GCOM1H8Y6P7 765 aaPredicted RBP19.66■□□□□ 0.74
HLA-DMA-201ENST00000374843 NFIBO00712 420 aa19.66■□□□□ 0.74
HLA-DMA-201ENST00000374843 BMP15O95972 392 aa19.66■□□□□ 0.74
HLA-DMA-201ENST00000374843 POLR2MP0CAP2 368 aa19.66■□□□□ 0.74
HLA-DMA-201ENST00000374843 COPB2P35606 906 aa19.66■□□□□ 0.74
HLA-DMA-201ENST00000374843 STAT3P40763 770 aa19.66■□□□□ 0.74
HLA-DMA-201ENST00000374843 PTPAQ15257 358 aa19.66■□□□□ 0.74
HLA-DMA-201ENST00000374843 TTC38Q5R3I4 469 aa19.66■□□□□ 0.74
HLA-DMA-201ENST00000374843 FAM43AQ8N2R8 423 aa19.66■□□□□ 0.74
HLA-DMA-201ENST00000374843 LINC00301Q8NCQ3 95 aa19.66■□□□□ 0.74
HLA-DMA-201ENST00000374843 CRYGNQ8WXF5 182 aa19.66■□□□□ 0.74
HLA-DMA-201ENST00000374843 SPATA32Q96LK8 384 aa19.66■□□□□ 0.74
HLA-DMA-201ENST00000374843 TRERF1Q96PN7 1200 aa19.66■□□□□ 0.74
HLA-DMA-201ENST00000374843 PARK7Q99497 189 aaKnown RBP19.66■□□□□ 0.74
HLA-DMA-201ENST00000374843 ANO3Q9BYT9 981 aa19.66■□□□□ 0.74
HLA-DMA-201ENST00000374843 SPATC1LQ9H0A9 340 aa19.66■□□□□ 0.74
HLA-DMA-201ENST00000374843 GDPD2Q9HCC8 539 aa19.66■□□□□ 0.74
HLA-DMA-201ENST00000374843 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.66■□□□□ 0.74
HLA-DMA-201ENST00000374843 TFIP11Q9UBB9 837 aaKnown RBP19.66■□□□□ 0.74
HLA-DMA-201ENST00000374843 RIPK3Q9Y572 518 aa19.66■□□□□ 0.74
HLA-DMA-201ENST00000374843 WNT7AO00755 349 aa19.65■□□□□ 0.74
HLA-DMA-201ENST00000374843 SLC39A14Q15043 492 aa19.65■□□□□ 0.74
HLA-DMA-201ENST00000374843 SF3A1Q15459 793 aaKnown RBP19.65■□□□□ 0.74
HLA-DMA-201ENST00000374843 INF2Q27J81 1249 aa19.65■□□□□ 0.74
HLA-DMA-201ENST00000374843 MUM1L1Q5H9M0 696 aa19.65■□□□□ 0.74
HLA-DMA-201ENST00000374843 NEK8Q86SG6 692 aa19.65■□□□□ 0.74
HLA-DMA-201ENST00000374843 CHST13Q8NET6 341 aa19.65■□□□□ 0.74
HLA-DMA-201ENST00000374843 KCNG4Q8TDN1 519 aa19.65■□□□□ 0.74
HLA-DMA-201ENST00000374843 CREBZFQ9NS37 354 aa19.65■□□□□ 0.74
HLA-DMA-201ENST00000374843 LMBRD1Q9NUN5 540 aa19.65■□□□□ 0.74
HLA-DMA-201ENST00000374843 PCDHB6Q9Y5E3 794 aa19.65■□□□□ 0.74
HLA-DMA-201ENST00000374843 FRMPD4Q14CM0 1322 aa19.65■□□□□ 0.74
HLA-DMA-201ENST00000374843 ADGRA2Q96PE1 1338 aa19.65■□□□□ 0.74
HLA-DMA-201ENST00000374843 RASSF10A6NK89 507 aa19.64■□□□□ 0.73
HLA-DMA-201ENST00000374843 SREBF1P36956 1147 aa19.64■□□□□ 0.73
HLA-DMA-201ENST00000374843 GCLCP48506 637 aaPredicted RBP19.64■□□□□ 0.73
HLA-DMA-201ENST00000374843 INHBEP58166 350 aa19.64■□□□□ 0.73
HLA-DMA-201ENST00000374843 NBR1Q14596 966 aa19.64■□□□□ 0.73
HLA-DMA-201ENST00000374843 TBCKQ8TEA7 893 aa19.64■□□□□ 0.73
HLA-DMA-201ENST00000374843 ACAD9Q9H845 621 aa19.64■□□□□ 0.73
HLA-DMA-201ENST00000374843 RBPJLQ9UBG7 517 aa19.64■□□□□ 0.73
HLA-DMA-201ENST00000374843 CEP131Q9UPN4 1083 aa19.64■□□□□ 0.73
HLA-DMA-201ENST00000374843 RPTORQ8N122 1335 aa19.63■□□□□ 0.73
HLA-DMA-201ENST00000374843 SPDYE3A6NKU9 549 aa19.63■□□□□ 0.73
HLA-DMA-201ENST00000374843 EDIL3O43854 480 aa19.63■□□□□ 0.73
HLA-DMA-201ENST00000374843 CFBP00751 764 aa19.63■□□□□ 0.73
HLA-DMA-201ENST00000374843 CYP2C8P10632 490 aa19.63■□□□□ 0.73
HLA-DMA-201ENST00000374843 HOXA13P31271 388 aaPredicted RBP19.63■□□□□ 0.73
HLA-DMA-201ENST00000374843 APLP1P51693 650 aa19.63■□□□□ 0.73
HLA-DMA-201ENST00000374843 STK38Q15208 465 aa19.63■□□□□ 0.73
HLA-DMA-201ENST00000374843 TBC1D5Q92609 795 aa19.63■□□□□ 0.73
HLA-DMA-201ENST00000374843 TXNRD2Q9NNW7 524 aa19.63■□□□□ 0.73
HLA-DMA-201ENST00000374843 HOMER2Q9NSB8 354 aa19.63■□□□□ 0.73
HLA-DMA-201ENST00000374843 MORF4L1Q9UBU8 362 aa19.63■□□□□ 0.73
HLA-DMA-201ENST00000374843 FBXO40Q9UH90 709 aa19.63■□□□□ 0.73
HLA-DMA-201ENST00000374843 IGF2BP3O00425 579 aaKnown RBP eCLIP19.62■□□□□ 0.73
HLA-DMA-201ENST00000374843 SPTLC2O15270 562 aa19.62■□□□□ 0.73
HLA-DMA-201ENST00000374843 PPP6R2O75170 966 aa19.62■□□□□ 0.73
HLA-DMA-201ENST00000374843 SLC25A27O95847 323 aa19.62■□□□□ 0.73
HLA-DMA-201ENST00000374843 CEBPZQ03701 1054 aaKnown RBP19.62■□□□□ 0.73
HLA-DMA-201ENST00000374843 SREBF2Q12772 1141 aa19.62■□□□□ 0.73
HLA-DMA-201ENST00000374843 MOXD1Q6UVY6 613 aa19.62■□□□□ 0.73
HLA-DMA-201ENST00000374843 SHCBP1Q8NEM2 672 aa19.62■□□□□ 0.73
HLA-DMA-201ENST00000374843 SYTL5Q8TDW5 730 aaPredicted RBP19.62■□□□□ 0.73
HLA-DMA-201ENST00000374843 PGBD1Q96JS3 809 aa19.62■□□□□ 0.73
HLA-DMA-201ENST00000374843 MBOAT7Q96N66 472 aa19.62■□□□□ 0.73
HLA-DMA-201ENST00000374843 NAP1L4Q99733 375 aaKnown RBP19.62■□□□□ 0.73
HLA-DMA-201ENST00000374843 MOV10L1Q9BXT6 1211 aaKnown RBP19.62■□□□□ 0.73
HLA-DMA-201ENST00000374843 EHMT1Q9H9B1 1298 aa19.62■□□□□ 0.73
HLA-DMA-201ENST00000374843 PRPF40AO75400 957 aaKnown RBP19.61■□□□□ 0.73
HLA-DMA-201ENST00000374843 CYP3A4P08684 503 aa19.61■□□□□ 0.73
HLA-DMA-201ENST00000374843 GCFC2P16383 781 aaKnown RBP19.61■□□□□ 0.73
HLA-DMA-201ENST00000374843 USP11P51784 963 aa19.61■□□□□ 0.73
HLA-DMA-201ENST00000374843 RPS6P62753 249 aaKnown RBP19.61■□□□□ 0.73
HLA-DMA-201ENST00000374843 ERVK-9P63128 1117 aa19.61■□□□□ 0.73
HLA-DMA-201ENST00000374843 ERVK-24P63145 666 aa19.61■□□□□ 0.73
HLA-DMA-201ENST00000374843 ATP2C1P98194 919 aaPredicted RBP19.61■□□□□ 0.73
HLA-DMA-201ENST00000374843 PLS1Q14651 629 aa19.61■□□□□ 0.73
HLA-DMA-201ENST00000374843 PPP4R3AQ6IN85 833 aa19.61■□□□□ 0.73
HLA-DMA-201ENST00000374843 SLC30A10Q6XR72 485 aa19.61■□□□□ 0.73
HLA-DMA-201ENST00000374843 JMYQ8N9B5 988 aa19.61■□□□□ 0.73
HLA-DMA-201ENST00000374843 SMCR8Q8TEV9 937 aaPredicted RBP19.61■□□□□ 0.73
HLA-DMA-201ENST00000374843 PAGR1Q9BTK6 254 aa19.61■□□□□ 0.73
HLA-DMA-201ENST00000374843 COL20A1Q9P218 1284 aa19.61■□□□□ 0.73
HLA-DMA-201ENST00000374843 THSD7BQ9C0I4 1608 aa19.61■□□□□ 0.73
HLA-DMA-201ENST00000374843 MYH7BA7E2Y1 1941 aa19.61■□□□□ 0.73
HLA-DMA-201ENST00000374843 PFASO15067 1338 aa19.6■□□□□ 0.73
HLA-DMA-201ENST00000374843 CYP3A7-CYP3A51PA0A087WV96 503 aa19.6■□□□□ 0.73
HLA-DMA-201ENST00000374843 CYP3A7P24462 503 aa19.6■□□□□ 0.73
HLA-DMA-201ENST00000374843 CIITAP33076 1130 aa19.6■□□□□ 0.73
HLA-DMA-201ENST00000374843 UBE2HP62256 183 aa19.6■□□□□ 0.73
HLA-DMA-201ENST00000374843 ARHGAP4P98171 946 aa19.6■□□□□ 0.73
HLA-DMA-201ENST00000374843 RNF207Q6ZRF8 634 aa19.6■□□□□ 0.73
HLA-DMA-201ENST00000374843 IFNL1Q8IU54 200 aa19.6■□□□□ 0.73
HLA-DMA-201ENST00000374843 A1CFQ9NQ94 594 aaKnown RBP19.6■□□□□ 0.73
HLA-DMA-201ENST00000374843 LCTP09848 1927 aa19.59■□□□□ 0.73
HLA-DMA-201ENST00000374843 LAD1O00515 517 aa19.59■□□□□ 0.73
HLA-DMA-201ENST00000374843 PEX10O60683 326 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms