RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 PPP4CP60510 307 aa20.04■□□□□ 0.8
PHF1-201ENST00000374512 ZNF804AQ7Z570 1209 aa20.04■□□□□ 0.8
PHF1-201ENST00000374512 CABP7Q86V35 215 aa20.04■□□□□ 0.8
PHF1-201ENST00000374512 CERS3Q8IU89 383 aa20.04■□□□□ 0.8
PHF1-201ENST00000374512 CNBD1Q8NA66 436 aa20.04■□□□□ 0.8
PHF1-201ENST00000374512 RASGRP4Q8TDF6 673 aa20.04■□□□□ 0.8
PHF1-201ENST00000374512 PURBQ96QR8 312 aaKnown RBP20.04■□□□□ 0.8
PHF1-201ENST00000374512 SPZ1Q9BXG8 430 aa20.04■□□□□ 0.8
PHF1-201ENST00000374512 TRIM9Q9C026 710 aa20.04■□□□□ 0.8
PHF1-201ENST00000374512 B4DLN1 442 aa20.04■□□□□ 0.8
PHF1-201ENST00000374512 LDHCP07864 332 aa20.04■□□□□ 0.8
PHF1-201ENST00000374512 OR52Z1P0C646 297 aa20.04■□□□□ 0.8
PHF1-201ENST00000374512 SMARCA1P28370 1054 aa20.04■□□□□ 0.8
PHF1-201ENST00000374512 IRX5P78411 483 aaPredicted RBP20.04■□□□□ 0.8
PHF1-201ENST00000374512 RAD51AP2Q09MP3 1159 aa20.04■□□□□ 0.8
PHF1-201ENST00000374512 HEATR3Q7Z4Q2 680 aa20.04■□□□□ 0.8
PHF1-201ENST00000374512 ZNF444Q8N0Y2 327 aaPredicted RBP20.04■□□□□ 0.8
PHF1-201ENST00000374512 NHEJ1Q9H9Q4 299 aaPredicted RBP20.04■□□□□ 0.8
PHF1-201ENST00000374512 TRIM10Q9UDY6 481 aa20.04■□□□□ 0.8
PHF1-201ENST00000374512 FLT1P17948 1338 aa20.04■□□□□ 0.8
PHF1-201ENST00000374512 PP2D1A8MPX8 630 aa20.03■□□□□ 0.8
PHF1-201ENST00000374512 TFRCP02786 760 aaKnown RBP20.03■□□□□ 0.8
PHF1-201ENST00000374512 ATP1A1P05023 1023 aaKnown RBP20.03■□□□□ 0.8
PHF1-201ENST00000374512 GYS2P54840 703 aa20.03■□□□□ 0.8
PHF1-201ENST00000374512 CNNM4Q6P4Q7 775 aa20.03■□□□□ 0.8
PHF1-201ENST00000374512 RUBCNQ92622 972 aa20.03■□□□□ 0.8
PHF1-201ENST00000374512 PLCG1P19174 1290 aa20.03■□□□□ 0.8
PHF1-201ENST00000374512 GNA11P29992 359 aa20.03■□□□□ 0.8
PHF1-201ENST00000374512 HNRNPH3P31942 346 aaKnown RBP20.03■□□□□ 0.8
PHF1-201ENST00000374512 PDE4DQ08499 809 aa20.03■□□□□ 0.8
PHF1-201ENST00000374512 FKBP15Q5T1M5 1219 aa20.03■□□□□ 0.8
PHF1-201ENST00000374512 CCDC102AQ96A19 550 aa20.03■□□□□ 0.8
PHF1-201ENST00000374512 CNOT6LQ96LI5 555 aaKnown RBP20.03■□□□□ 0.8
PHF1-201ENST00000374512 SUGCTQ9HAC7 445 aa20.03■□□□□ 0.8
PHF1-201ENST00000374512 FAN1Q9Y2M0 1017 aa20.03■□□□□ 0.8
PHF1-201ENST00000374512 USP17L3A6NCW0 530 aa20.02■□□□□ 0.8
PHF1-201ENST00000374512 USP17L4A6NCW7 530 aa20.02■□□□□ 0.8
PHF1-201ENST00000374512 CYTH3O43739 400 aa20.02■□□□□ 0.8
PHF1-201ENST00000374512 NONOQ15233 471 aaKnown RBP eCLIP20.02■□□□□ 0.81e-7■■■■□ 26.2
PHF1-201ENST00000374512 DIXDC1Q155Q3 683 aa20.02■□□□□ 0.8
PHF1-201ENST00000374512 USP17L1Q7RTZ2 530 aa20.02■□□□□ 0.8
PHF1-201ENST00000374512 TGFBRAP1Q8WUH2 860 aa20.02■□□□□ 0.8
PHF1-201ENST00000374512 MMS19Q96T76 1030 aa20.02■□□□□ 0.8
PHF1-201ENST00000374512 ABCB11O95342 1321 aa20.02■□□□□ 0.8
PHF1-201ENST00000374512 AFF2P51816 1311 aa20.02■□□□□ 0.8
PHF1-201ENST00000374512 CAPN2P17655 700 aa20.02■□□□□ 0.79
PHF1-201ENST00000374512 VAV2P52735 878 aa20.02■□□□□ 0.79
PHF1-201ENST00000374512 ITIH3Q06033 890 aa20.02■□□□□ 0.79
PHF1-201ENST00000374512 KIF5AQ12840 1032 aa20.02■□□□□ 0.79
PHF1-201ENST00000374512 C15orf52Q6ZUT6 534 aaKnown RBP20.02■□□□□ 0.79
PHF1-201ENST00000374512 C6orf50Q9HD87 102 aa20.02■□□□□ 0.79
PHF1-201ENST00000374512 AGPAT5Q9NUQ2 364 aa20.02■□□□□ 0.79
PHF1-201ENST00000374512 UBR3Q6ZT12 1888 aa20.01■□□□□ 0.79
PHF1-201ENST00000374512 LRRIQ3A6PVS8 624 aaPredicted RBP20.01■□□□□ 0.79
PHF1-201ENST00000374512 ENC1O14682 589 aa20.01■□□□□ 0.79
PHF1-201ENST00000374512 MTIF2P46199 727 aaKnown RBP20.01■□□□□ 0.79
PHF1-201ENST00000374512 ANKRD40Q6AI12 368 aa20.01■□□□□ 0.79
PHF1-201ENST00000374512 CCDC70Q6NSX1 233 aa20.01■□□□□ 0.79
PHF1-201ENST00000374512 SEPT12Q8IYM1 358 aa20.01■□□□□ 0.79
PHF1-201ENST00000374512 NOC4LQ9BVI4 516 aaKnown RBP20.01■□□□□ 0.79
PHF1-201ENST00000374512 LRRC4BQ9NT99 713 aa20.01■□□□□ 0.79
PHF1-201ENST00000374512 RASSF10A6NK89 507 aa20■□□□□ 0.79
PHF1-201ENST00000374512 PRLRP16471 622 aa20■□□□□ 0.79
PHF1-201ENST00000374512 SPA17Q15506 151 aa20■□□□□ 0.79
PHF1-201ENST00000374512 TXNRD1Q16881 649 aa20■□□□□ 0.79
PHF1-201ENST00000374512 SLC35G1Q2M3R5 365 aa20■□□□□ 0.79
PHF1-201ENST00000374512 TRIM58Q8NG06 486 aa20■□□□□ 0.79
PHF1-201ENST00000374512 TMEM47Q9BQJ4 181 aa20■□□□□ 0.79
PHF1-201ENST00000374512 HDAC6Q9UBN7 1215 aa20■□□□□ 0.79
PHF1-201ENST00000374512 TRPC5Q9UL62 973 aaPredicted RBP20■□□□□ 0.79
PHF1-201ENST00000374512 STX8Q9UNK0 236 aa20■□□□□ 0.79
PHF1-201ENST00000374512 USO1O60763 962 aaKnown RBP20■□□□□ 0.79
PHF1-201ENST00000374512 N4BP1O75113 896 aaKnown RBP20■□□□□ 0.79
PHF1-201ENST00000374512 FGFR1OPO95684 399 aaKnown RBP20■□□□□ 0.79
PHF1-201ENST00000374512 ASIC1P78348 528 aa20■□□□□ 0.79
PHF1-201ENST00000374512 GRIK5Q16478 980 aa20■□□□□ 0.79
PHF1-201ENST00000374512 MIIPQ5JXC2 388 aa20■□□□□ 0.79
PHF1-201ENST00000374512 NEK8Q86SG6 692 aa20■□□□□ 0.79
PHF1-201ENST00000374512 GOLGA6L1Q8N7Z2 621 aa20■□□□□ 0.79
PHF1-201ENST00000374512 CALML4Q96GE6 196 aa20■□□□□ 0.79
PHF1-201ENST00000374512 PLAGL2Q9UPG8 496 aa20■□□□□ 0.79
PHF1-201ENST00000374512 CDK5RAP2Q96SN8 1893 aa20■□□□□ 0.79
PHF1-201ENST00000374512 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.99■□□□□ 0.79
PHF1-201ENST00000374512 KLRF2D3W0D1 207 aa19.99■□□□□ 0.79
PHF1-201ENST00000374512 PRR5LQ6MZQ0 368 aa19.99■□□□□ 0.79
PHF1-201ENST00000374512 FOXR2Q6PJQ5 311 aa19.99■□□□□ 0.79
PHF1-201ENST00000374512 COG1Q8WTW3 980 aa19.99■□□□□ 0.79
PHF1-201ENST00000374512 SECISBP2LQ93073 1101 aaKnown RBP19.99■□□□□ 0.79
PHF1-201ENST00000374512 CCDC42Q96M95 316 aa19.99■□□□□ 0.79
PHF1-201ENST00000374512 RTFDC1Q9BY42 306 aaPredicted RBP19.99■□□□□ 0.79
PHF1-201ENST00000374512 JRKLQ9Y4A0 524 aa19.99■□□□□ 0.79
PHF1-201ENST00000374512 RASA1P20936 1047 aa19.99■□□□□ 0.79
PHF1-201ENST00000374512 NAPAP54920 295 aa19.99■□□□□ 0.79
PHF1-201ENST00000374512 STK4Q13043 487 aa19.99■□□□□ 0.79
PHF1-201ENST00000374512 CENPPQ6IPU0 288 aa19.99■□□□□ 0.79
PHF1-201ENST00000374512 ZNF572Q7Z3I7 529 aaPredicted RBP19.99■□□□□ 0.79
PHF1-201ENST00000374512 CCDC84Q86UT8 332 aaPredicted RBP19.99■□□□□ 0.79
PHF1-201ENST00000374512 MAPKAPK5Q8IW41 473 aa19.99■□□□□ 0.79
PHF1-201ENST00000374512 SLC44A5Q8NCS7 719 aa19.99■□□□□ 0.79
PHF1-201ENST00000374512 LRRC15Q8TF66 581 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms