RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 GPRC5DQ9NZD1 345 aa19.08■□□□□ 0.65
PTPN20-203ENST00000374342 DDX25Q9UHL0 483 aaKnown RBP19.08■□□□□ 0.65
PTPN20-203ENST00000374342 DACH1Q9UI36 760 aa19.08■□□□□ 0.65
PTPN20-203ENST00000374342 ZKSCAN5Q9Y2L8 839 aa19.08■□□□□ 0.65
PTPN20-203ENST00000374342 RBBP6Q7Z6E9 1792 aaKnown RBP19.08■□□□□ 0.64
PTPN20-203ENST00000374342 GOLGA6L6A8MZA4 724 aa19.08■□□□□ 0.64
PTPN20-203ENST00000374342 MEIS2O14770 477 aa19.08■□□□□ 0.64
PTPN20-203ENST00000374342 GTPBP6O43824 516 aaPredicted RBP19.08■□□□□ 0.64
PTPN20-203ENST00000374342 TMEM266Q2M3C6 531 aa19.08■□□□□ 0.64
PTPN20-203ENST00000374342 PPP4R3AQ6IN85 833 aa19.08■□□□□ 0.64
PTPN20-203ENST00000374342 GPC2Q8N158 579 aa19.08■□□□□ 0.64
PTPN20-203ENST00000374342 MLKLQ8NB16 471 aa19.08■□□□□ 0.64
PTPN20-203ENST00000374342 CHURC1Q8WUH1 139 aa19.08■□□□□ 0.64
PTPN20-203ENST00000374342 MTMR9Q96QG7 549 aa19.08■□□□□ 0.64
PTPN20-203ENST00000374342 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.08■□□□□ 0.64
PTPN20-203ENST00000374342 GCFC2P16383 781 aaKnown RBP19.07■□□□□ 0.64
PTPN20-203ENST00000374342 NAALADL2Q58DX5 795 aa19.07■□□□□ 0.64
PTPN20-203ENST00000374342 FAM160B2Q86V87 743 aa19.07■□□□□ 0.64
PTPN20-203ENST00000374342 PLCG1P19174 1290 aa19.06■□□□□ 0.64
PTPN20-203ENST00000374342 LMOD1P29536 600 aaPredicted RBP19.06■□□□□ 0.64
PTPN20-203ENST00000374342 CDC25BP30305 580 aa19.06■□□□□ 0.64
PTPN20-203ENST00000374342 CUL4BQ13620 913 aa19.06■□□□□ 0.64
PTPN20-203ENST00000374342 DCAF15Q66K64 600 aa19.06■□□□□ 0.64
PTPN20-203ENST00000374342 IGSF22Q8N9C0 903 aa19.06■□□□□ 0.64
PTPN20-203ENST00000374342 GSDMAQ96QA5 445 aa19.06■□□□□ 0.64
PTPN20-203ENST00000374342 MTRQ99707 1265 aa19.06■□□□□ 0.64
PTPN20-203ENST00000374342 NAP1L4Q99733 375 aaKnown RBP19.06■□□□□ 0.64
PTPN20-203ENST00000374342 RANBP17Q9H2T7 1088 aaKnown RBP19.06■□□□□ 0.64
PTPN20-203ENST00000374342 FBXO28Q9NVF7 368 aa19.06■□□□□ 0.64
PTPN20-203ENST00000374342 GGA3Q9NZ52 723 aa19.06■□□□□ 0.64
PTPN20-203ENST00000374342 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.06■□□□□ 0.64
PTPN20-203ENST00000374342 PARP14Q460N5 1801 aa19.06■□□□□ 0.64
PTPN20-203ENST00000374342 POLR2AP24928 1970 aaKnown RBP19.06■□□□□ 0.64
PTPN20-203ENST00000374342 SPDYE3A6NKU9 549 aa19.06■□□□□ 0.64
PTPN20-203ENST00000374342 CTNND1O60716 968 aaKnown RBP19.06■□□□□ 0.64
PTPN20-203ENST00000374342 INPP5BP32019 993 aa19.06■□□□□ 0.64
PTPN20-203ENST00000374342 FXR2P51116 673 aaKnown RBP eCLIP19.06■□□□□ 0.64
PTPN20-203ENST00000374342 MRFAP1L1Q96HT8 127 aa19.06■□□□□ 0.64
PTPN20-203ENST00000374342 FEM1BQ9UK73 627 aa19.06■□□□□ 0.64
PTPN20-203ENST00000374342 PHIPQ8WWQ0 1821 aa19.05■□□□□ 0.64
PTPN20-203ENST00000374342 OPLAHO14841 1288 aa19.05■□□□□ 0.64
PTPN20-203ENST00000374342 HOXA13P31271 388 aaPredicted RBP19.05■□□□□ 0.64
PTPN20-203ENST00000374342 ZNF830Q96NB3 372 aaPredicted RBP19.05■□□□□ 0.64
PTPN20-203ENST00000374342 P2RX7Q99572 595 aaKnown RBP19.05■□□□□ 0.64
PTPN20-203ENST00000374342 LRWD1Q9UFC0 647 aa19.05■□□□□ 0.64
PTPN20-203ENST00000374342 POTEMA6NI47 508 aa19.04■□□□□ 0.64
PTPN20-203ENST00000374342 MARCH6O60337 910 aa19.04■□□□□ 0.64
PTPN20-203ENST00000374342 PLA2G6O60733 806 aa19.04■□□□□ 0.64
PTPN20-203ENST00000374342 EPS15P42566 896 aa19.04■□□□□ 0.64
PTPN20-203ENST00000374342 TRAF1Q13077 416 aa19.04■□□□□ 0.64
PTPN20-203ENST00000374342 PRAMEF18Q5VWM3 479 aa19.04■□□□□ 0.64
PTPN20-203ENST00000374342 MCTP2Q6DN12 878 aa19.04■□□□□ 0.64
PTPN20-203ENST00000374342 TRMT44Q8IYL2 757 aaKnown RBP19.04■□□□□ 0.64
PTPN20-203ENST00000374342 LRRC15Q8TF66 581 aa19.04■□□□□ 0.64
PTPN20-203ENST00000374342 RAB34Q9BZG1 259 aa19.04■□□□□ 0.64
PTPN20-203ENST00000374342 GINM1Q9NU53 330 aa19.04■□□□□ 0.64
PTPN20-203ENST00000374342 ARHGAP4P98171 946 aa19.04■□□□□ 0.64
PTPN20-203ENST00000374342 FMR1Q06787 632 aaKnown RBP eCLIP19.04■□□□□ 0.64
PTPN20-203ENST00000374342 DGKZQ13574 1117 aa19.04■□□□□ 0.64
PTPN20-203ENST00000374342 CALML4Q96GE6 196 aa19.04■□□□□ 0.64
PTPN20-203ENST00000374342 MMTAG2Q9BU76 263 aaKnown RBP19.04■□□□□ 0.64
PTPN20-203ENST00000374342 HSD3B7Q9H2F3 369 aa19.04■□□□□ 0.64
PTPN20-203ENST00000374342 TTC12Q9H892 705 aaPredicted RBP19.04■□□□□ 0.64
PTPN20-203ENST00000374342 SSC5DA1L4H1 1573 aa19.03■□□□□ 0.64
PTPN20-203ENST00000374342 WDR46O15213 610 aaKnown RBP19.03■□□□□ 0.64
PTPN20-203ENST00000374342 PTGS1P23219 599 aa19.03■□□□□ 0.64
PTPN20-203ENST00000374342 USP11P51784 963 aa19.03■□□□□ 0.64
PTPN20-203ENST00000374342 SMYD4Q8IYR2 804 aaPredicted RBP19.03■□□□□ 0.64
PTPN20-203ENST00000374342 GJA10Q969M2 543 aa19.03■□□□□ 0.64
PTPN20-203ENST00000374342 KIAA1683Q9H0B3 1180 aa19.03■□□□□ 0.64
PTPN20-203ENST00000374342 CUEDC2Q9H467 287 aa19.03■□□□□ 0.64
PTPN20-203ENST00000374342 IFNKQ9P0W0 207 aa19.03■□□□□ 0.64
PTPN20-203ENST00000374342 SYNRGQ9UMZ2 1314 aa19.02■□□□□ 0.64
PTPN20-203ENST00000374342 FOSP01100 380 aaPredicted RBP19.02■□□□□ 0.64
PTPN20-203ENST00000374342 RPN1P04843 607 aaKnown RBP19.02■□□□□ 0.64
PTPN20-203ENST00000374342 ATP1A3P13637 1013 aa19.02■□□□□ 0.64
PTPN20-203ENST00000374342 MTMR2Q13614 643 aa19.02■□□□□ 0.64
PTPN20-203ENST00000374342 LPAR1Q92633 364 aa19.02■□□□□ 0.64
PTPN20-203ENST00000374342 HAS1Q92839 578 aa19.02■□□□□ 0.64
PTPN20-203ENST00000374342 HOOK2Q96ED9 719 aa19.02■□□□□ 0.64
PTPN20-203ENST00000374342 CDK5RAP3Q96JB5 506 aa19.02■□□□□ 0.64
PTPN20-203ENST00000374342 WRNIP1Q96S55 665 aa19.02■□□□□ 0.64
PTPN20-203ENST00000374342 MAGEF1Q9HAY2 307 aa19.02■□□□□ 0.64
PTPN20-203ENST00000374342 RNF181Q9P0P0 153 aa19.02■□□□□ 0.64
PTPN20-203ENST00000374342 FZD1Q9UP38 647 aa19.02■□□□□ 0.64
PTPN20-203ENST00000374342 TPM3P06753 285 aa19.02■□□□□ 0.63
PTPN20-203ENST00000374342 SREBF1P36956 1147 aa19.02■□□□□ 0.63
PTPN20-203ENST00000374342 KLHL10Q6JEL2 608 aa19.02■□□□□ 0.63
PTPN20-203ENST00000374342 SCYL3Q8IZE3 742 aa19.02■□□□□ 0.63
PTPN20-203ENST00000374342 CRYGNQ8WXF5 182 aa19.02■□□□□ 0.63
PTPN20-203ENST00000374342 UIMC1Q96RL1 719 aa19.02■□□□□ 0.63
PTPN20-203ENST00000374342 TANGO6Q9C0B7 1094 aa19.02■□□□□ 0.63
PTPN20-203ENST00000374342 XPO4Q9C0E2 1151 aaKnown RBP19.02■□□□□ 0.63
PTPN20-203ENST00000374342 FANCLQ9NW38 375 aa19.02■□□□□ 0.63
PTPN20-203ENST00000374342 RMND1Q9NWS8 449 aa19.02■□□□□ 0.63
PTPN20-203ENST00000374342 NRBP1Q9UHY1 535 aa19.02■□□□□ 0.63
PTPN20-203ENST00000374342 WDR90Q96KV7 1748 aa19.01■□□□□ 0.63
PTPN20-203ENST00000374342 PIK3CDO00329 1044 aa19.01■□□□□ 0.63
PTPN20-203ENST00000374342 CFBP00751 764 aa19.01■□□□□ 0.63
PTPN20-203ENST00000374342 CD44P16070 742 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms