RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 TM4SF4P48230 202 aa20.09■□□□□ 0.81
C9orf43-202ENST00000374165 MRPL12P52815 198 aaKnown RBP20.09■□□□□ 0.81
C9orf43-202ENST00000374165 MOV10L1Q9BXT6 1211 aaKnown RBP20.09■□□□□ 0.81
C9orf43-202ENST00000374165 BRMS1Q9HCU9 246 aa20.09■□□□□ 0.81
C9orf43-202ENST00000374165 RNF146Q9NTX7 359 aa20.09■□□□□ 0.81
C9orf43-202ENST00000374165 RABGAP1Q9Y3P9 1069 aa20.09■□□□□ 0.81
C9orf43-202ENST00000374165 INHBEP58166 350 aa20.08■□□□□ 0.8
C9orf43-202ENST00000374165 MYSM1Q5VVJ2 828 aa20.08■□□□□ 0.8
C9orf43-202ENST00000374165 CNPY2Q9Y2B0 182 aa20.08■□□□□ 0.8
C9orf43-202ENST00000374165 NOGQ13253 232 aa20.07■□□□□ 0.8
C9orf43-202ENST00000374165 BRAPQ7Z569 592 aa20.07■□□□□ 0.8
C9orf43-202ENST00000374165 PURBQ96QR8 312 aaKnown RBP20.07■□□□□ 0.8
C9orf43-202ENST00000374165 COL20A1Q9P218 1284 aa20.07■□□□□ 0.8
C9orf43-202ENST00000374165 EDIL3O43854 480 aa20.07■□□□□ 0.8
C9orf43-202ENST00000374165 VEGFBP49765 207 aa20.07■□□□□ 0.8
C9orf43-202ENST00000374165 ERVK-9P63128 1117 aa20.07■□□□□ 0.8
C9orf43-202ENST00000374165 ERVK-24P63145 666 aa20.07■□□□□ 0.8
C9orf43-202ENST00000374165 TRAF1Q13077 416 aa20.07■□□□□ 0.8
C9orf43-202ENST00000374165 RIOX2Q8IUF8 465 aa20.07■□□□□ 0.8
C9orf43-202ENST00000374165 GPT2Q8TD30 523 aa20.07■□□□□ 0.8
C9orf43-202ENST00000374165 PARK7Q99497 189 aaKnown RBP20.07■□□□□ 0.8
C9orf43-202ENST00000374165 ATP2B1P20020 1258 aa20.06■□□□□ 0.8
C9orf43-202ENST00000374165 CEBPZQ03701 1054 aaKnown RBP20.06■□□□□ 0.8
C9orf43-202ENST00000374165 SREBF2Q12772 1141 aa20.06■□□□□ 0.8
C9orf43-202ENST00000374165 INF2Q27J81 1249 aa20.06■□□□□ 0.8
C9orf43-202ENST00000374165 FCHSD1Q86WN1 690 aa20.06■□□□□ 0.8
C9orf43-202ENST00000374165 BICD2Q8TD16 824 aa20.06■□□□□ 0.8
C9orf43-202ENST00000374165 USP28Q96RU2 1077 aa20.06■□□□□ 0.8
C9orf43-202ENST00000374165 PORCNQ9H237 461 aa20.06■□□□□ 0.8
C9orf43-202ENST00000374165 DOCK3Q8IZD9 2030 aa20.06■□□□□ 0.8
C9orf43-202ENST00000374165 PIK3CDO00329 1044 aa20.05■□□□□ 0.8
C9orf43-202ENST00000374165 RPS6P62753 249 aaKnown RBP20.05■□□□□ 0.8
C9orf43-202ENST00000374165 TAF1CQ15572 869 aaPredicted RBP20.05■□□□□ 0.8
C9orf43-202ENST00000374165 CPA4Q9UI42 421 aa20.05■□□□□ 0.8
C9orf43-202ENST00000374165 CCDC194A0A1B0GVG4 234 aa20.05■□□□□ 0.8
C9orf43-202ENST00000374165 ERCC3P19447 782 aa20.05■□□□□ 0.8
C9orf43-202ENST00000374165 HSD17B4P51659 736 aa20.05■□□□□ 0.8
C9orf43-202ENST00000374165 NSMFQ6X4W1 530 aa20.05■□□□□ 0.8
C9orf43-202ENST00000374165 SLC30A10Q6XR72 485 aa20.05■□□□□ 0.8
C9orf43-202ENST00000374165 NCAPG2Q86XI2 1143 aa20.05■□□□□ 0.8
C9orf43-202ENST00000374165 TMEM87AQ8NBN3 555 aa20.05■□□□□ 0.8
C9orf43-202ENST00000374165 CLIC4Q9Y696 253 aa20.05■□□□□ 0.8
C9orf43-202ENST00000374165 ZNFX1Q9P2E3 1918 aaKnown RBP20.05■□□□□ 0.8
C9orf43-202ENST00000374165 ADGRA2Q96PE1 1338 aa20.04■□□□□ 0.8
C9orf43-202ENST00000374165 GCOM1H8Y6P7 765 aaPredicted RBP20.04■□□□□ 0.8
C9orf43-202ENST00000374165 POLR2MP0CAP2 368 aa20.04■□□□□ 0.8
C9orf43-202ENST00000374165 GPRC5AQ8NFJ5 357 aa20.04■□□□□ 0.8
C9orf43-202ENST00000374165 TBCKQ8TEA7 893 aa20.04■□□□□ 0.8
C9orf43-202ENST00000374165 EFCC1Q9HA90 598 aa20.04■□□□□ 0.8
C9orf43-202ENST00000374165 A1CFQ9NQ94 594 aaKnown RBP20.04■□□□□ 0.8
C9orf43-202ENST00000374165 PCDHB6Q9Y5E3 794 aa20.04■□□□□ 0.8
C9orf43-202ENST00000374165 RBBP6Q7Z6E9 1792 aaKnown RBP20.04■□□□□ 0.8
C9orf43-202ENST00000374165 NCLP19338 710 aaKnown RBP20.03■□□□□ 0.8
C9orf43-202ENST00000374165 GCLCP48506 637 aaPredicted RBP20.03■□□□□ 0.8
C9orf43-202ENST00000374165 CRHR2Q13324 411 aa20.03■□□□□ 0.8
C9orf43-202ENST00000374165 BAATQ14032 418 aaPredicted RBP20.03■□□□□ 0.8
C9orf43-202ENST00000374165 ACAD9Q9H845 621 aa20.03■□□□□ 0.8
C9orf43-202ENST00000374165 ZCCHC17Q9NP64 241 aaKnown RBP20.03■□□□□ 0.8
C9orf43-202ENST00000374165 PNMA2Q9UL42 364 aa20.03■□□□□ 0.8
C9orf43-202ENST00000374165 LCTP09848 1927 aa20.03■□□□□ 0.8
C9orf43-202ENST00000374165 GHRHRQ02643 423 aa20.03■□□□□ 0.8
C9orf43-202ENST00000374165 RNF207Q6ZRF8 634 aa20.03■□□□□ 0.8
C9orf43-202ENST00000374165 KRT25Q7Z3Z0 450 aa20.03■□□□□ 0.8
C9orf43-202ENST00000374165 GLT8D2Q9H1C3 349 aa20.03■□□□□ 0.8
C9orf43-202ENST00000374165 MORF4L1Q9UBU8 362 aa20.03■□□□□ 0.8
C9orf43-202ENST00000374165 FIBPO43427 364 aa20.02■□□□□ 0.8
C9orf43-202ENST00000374165 GADD45BO75293 160 aaPredicted RBP20.02■□□□□ 0.8
C9orf43-202ENST00000374165 ECM2O94769 699 aaPredicted RBP20.02■□□□□ 0.8
C9orf43-202ENST00000374165 NONOQ15233 471 aaKnown RBP eCLIP20.02■□□□□ 0.8
C9orf43-202ENST00000374165 MCF2L2Q86YR7 1114 aa20.02■□□□□ 0.8
C9orf43-202ENST00000374165 SYTL5Q8TDW5 730 aaPredicted RBP20.02■□□□□ 0.8
C9orf43-202ENST00000374165 ANO3Q9BYT9 981 aa20.02■□□□□ 0.8
C9orf43-202ENST00000374165 CYP39A1Q9NYL5 469 aa20.02■□□□□ 0.8
C9orf43-202ENST00000374165 HTTP42858 3142 aa20.02■□□□□ 0.8
C9orf43-202ENST00000374165 TLR2O60603 784 aa20.02■□□□□ 0.79
C9orf43-202ENST00000374165 UBXN2AP68543 259 aa20.02■□□□□ 0.79
C9orf43-202ENST00000374165 CHST13Q8NET6 341 aa20.02■□□□□ 0.79
C9orf43-202ENST00000374165 BCRP11274 1271 aa20.01■□□□□ 0.79
C9orf43-202ENST00000374165 SF3A1Q15459 793 aaKnown RBP20.01■□□□□ 0.79
C9orf43-202ENST00000374165 FAM110CQ1W6H9 321 aa20.01■□□□□ 0.79
C9orf43-202ENST00000374165 TKFCQ3LXA3 575 aa20.01■□□□□ 0.79
C9orf43-202ENST00000374165 RILPL1Q5EBL4 403 aa20.01■□□□□ 0.79
C9orf43-202ENST00000374165 CAVIN1Q6NZI2 390 aaKnown RBP20.01■□□□□ 0.79
C9orf43-202ENST00000374165 GTF3C2Q8WUA4 911 aaPredicted RBP20.01■□□□□ 0.79
C9orf43-202ENST00000374165 CRYGNQ8WXF5 182 aa20.01■□□□□ 0.79
C9orf43-202ENST00000374165 TAAR1Q96RJ0 339 aa20.01■□□□□ 0.79
C9orf43-202ENST00000374165 MRVI1Q9Y6F6 885 aa20.01■□□□□ 0.79
C9orf43-202ENST00000374165 SPDYE3A6NKU9 549 aa20■□□□□ 0.79
C9orf43-202ENST00000374165 MBD3O95983 291 aa20■□□□□ 0.79
C9orf43-202ENST00000374165 WDR78Q5VTH9 848 aa20■□□□□ 0.79
C9orf43-202ENST00000374165 C17orf99Q6UX52 265 aa20■□□□□ 0.79
C9orf43-202ENST00000374165 ZFP91Q96JP5 570 aaPredicted RBP20■□□□□ 0.79
C9orf43-202ENST00000374165 SLC25A27O95847 323 aa20■□□□□ 0.79
C9orf43-202ENST00000374165 AP3B2Q13367 1082 aa20■□□□□ 0.79
C9orf43-202ENST00000374165 ZNF174Q15697 407 aa20■□□□□ 0.79
C9orf43-202ENST00000374165 LETM2Q2VYF4 491 aa20■□□□□ 0.79
C9orf43-202ENST00000374165 ANKRD35Q8N283 1001 aa20■□□□□ 0.79
C9orf43-202ENST00000374165 ASTN1O14525 1302 aa19.99■□□□□ 0.79
C9orf43-202ENST00000374165 CA12O43570 354 aa19.99■□□□□ 0.79
C9orf43-202ENST00000374165 KRT85P78386 507 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms