RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 ATG3Q9NT62 314 aa10.81□□□□□ -0.68
TRERF1-204ENST00000372922 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.81□□□□□ -0.68
TRERF1-204ENST00000372922 XPAP23025 273 aaPredicted RBP10.81□□□□□ -0.68
TRERF1-204ENST00000372922 ADCY8P40145 1251 aa10.81□□□□□ -0.68
TRERF1-204ENST00000372922 PPFIA1Q13136 1202 aa10.81□□□□□ -0.68
TRERF1-204ENST00000372922 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.81□□□□□ -0.68
TRERF1-204ENST00000372922 ANAPC5Q9UJX4 755 aa10.81□□□□□ -0.68
TRERF1-204ENST00000372922 SEC24BO95487 1268 aa10.81□□□□□ -0.68
TRERF1-204ENST00000372922 GOLGA8HP0CJ92 632 aa10.81□□□□□ -0.68
TRERF1-204ENST00000372922 GARSP41250 739 aaKnown RBP10.81□□□□□ -0.68
TRERF1-204ENST00000372922 TRIML1Q8N9V2 468 aa10.81□□□□□ -0.68
TRERF1-204ENST00000372922 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.81□□□□□ -0.68
TRERF1-204ENST00000372922 SCYL1Q96KG9 808 aa10.81□□□□□ -0.68
TRERF1-204ENST00000372922 LAD1O00515 517 aa10.81□□□□□ -0.68
TRERF1-204ENST00000372922 GTPBP6O43824 516 aaPredicted RBP10.81□□□□□ -0.68
TRERF1-204ENST00000372922 GPIHBP1Q8IV16 184 aa10.81□□□□□ -0.68
TRERF1-204ENST00000372922 TTLL1O95922 423 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 HSPD1P10809 573 aaKnown RBP10.8□□□□□ -0.68
TRERF1-204ENST00000372922 PFKFB1P16118 471 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 RASSF2P50749 326 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 DISC1Q9NRI5 854 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 FAF1Q9UNN5 650 aaPredicted RBP10.8□□□□□ -0.68
TRERF1-204ENST00000372922 SAR1BQ9Y6B6 198 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 ARHGEF37A1IGU5 675 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 PFKFB2O60825 505 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 STMN1P16949 149 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 CCND2P30279 289 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 RANBP1P43487 201 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 SKOR1P84550 965 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 ME3Q16798 604 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 MAP7D3Q8IWC1 876 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 PPM1KQ8N3J5 372 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 GPKOWQ92917 476 aaPredicted RBP eCLIP10.8□□□□□ -0.68
TRERF1-204ENST00000372922 RGS16O15492 202 aaPredicted RBP10.8□□□□□ -0.68
TRERF1-204ENST00000372922 S100BP04271 92 aaPredicted RBP10.8□□□□□ -0.68
TRERF1-204ENST00000372922 KRT3P12035 628 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 ADAM9Q13443 819 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 UBE3CQ15386 1083 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 SOS2Q07890 1332 aaPredicted RBP10.8□□□□□ -0.68
TRERF1-204ENST00000372922 KRIT1O00522 736 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 RNF40O75150 1001 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 CIAO1O76071 339 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 GSTA1P08263 222 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 GSTA2P09210 222 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 TSNAXIP1Q2TAA8 658 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 KRT71Q3SY84 523 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 ZNF449Q6P9G9 518 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 POTEDQ86YR6 584 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 BBOF1Q8ND07 529 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 ZNF577Q9BSK1 485 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 APOL6Q9BWW8 343 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 KCNK3O14649 394 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 BBOX1O75936 387 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 RPN1P04843 607 aaKnown RBP10.8□□□□□ -0.68
TRERF1-204ENST00000372922 GJC2Q5T442 439 aaPredicted RBP10.8□□□□□ -0.68
TRERF1-204ENST00000372922 MAP3K21Q5TCX8 1036 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 SSH3Q8TE77 659 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 CACTINQ8WUQ7 758 aaKnown RBP10.8□□□□□ -0.68
TRERF1-204ENST00000372922 CAPN15O75808 1086 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 ZSCAN20P17040 1043 aaPredicted RBP10.8□□□□□ -0.68
TRERF1-204ENST00000372922 IL6STP40189 918 aaPredicted RBP10.8□□□□□ -0.68
TRERF1-204ENST00000372922 MFAP3P55082 362 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 PTK2Q05397 1052 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 CDHR1Q96JP9 859 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 PALMDQ9NP74 551 aa10.8□□□□□ -0.68
TRERF1-204ENST00000372922 SRGAP2BP0DMP2 458 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 STX2P32856 288 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 CCDC127Q96BQ5 260 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 NACC1Q96RE7 527 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 SNX25Q9H3E2 840 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 KIAA1468Q9P260 1216 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 SLC12A6Q9UHW9 1150 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 EIF3CLB5ME19 914 aaKnown RBP10.79□□□□□ -0.68
TRERF1-204ENST00000372922 PDE8BO95263 885 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 NSFP46459 744 aaKnown RBP10.79□□□□□ -0.68
TRERF1-204ENST00000372922 CCDC92Q53HC0 331 aaPredicted RBP10.79□□□□□ -0.68
TRERF1-204ENST00000372922 SKA2Q8WVK7 121 aaPredicted RBP10.79□□□□□ -0.68
TRERF1-204ENST00000372922 FAM81BQ96LP2 452 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 EIF3CQ99613 913 aaKnown RBP10.79□□□□□ -0.68
TRERF1-204ENST00000372922 DDX41Q9UJV9 622 aaKnown RBP10.79□□□□□ -0.68
TRERF1-204ENST00000372922 CLRN2A0PK11 232 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 GAP43P17677 238 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 NXNQ6DKJ4 435 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 CCDC13Q8IYE1 715 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 SLC7A3Q8WY07 619 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 RUNDC3BQ96NL0 473 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 HYOU1Q9Y4L1 999 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 ATP8B3O60423 1300 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 MYL7Q01449 175 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 RNASELQ05823 741 aaKnown RBP10.79□□□□□ -0.68
TRERF1-204ENST00000372922 BFSP1Q12934 665 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 GREM2Q9H772 168 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 ZNF233A6NK53 670 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 FGAP02671 866 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 SERPINB2P05120 415 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 ODR4Q5SWX8 454 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 CC2D2BQ6DHV5 1058 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 SPATS2Q86XZ4 545 aaKnown RBP10.79□□□□□ -0.68
TRERF1-204ENST00000372922 RMDN2Q96LZ7 410 aa10.79□□□□□ -0.68
TRERF1-204ENST00000372922 CUEDC2Q9H467 287 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms