RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 LEMD3Q9Y2U8 911 aa14.24□□□□□ -0.13
CTPS1-202ENST00000372621 SRGAP2O75044 1071 aa14.24□□□□□ -0.13
CTPS1-202ENST00000372621 HNRNPH3P31942 346 aaKnown RBP14.24□□□□□ -0.13
CTPS1-202ENST00000372621 NOVP48745 357 aa14.24□□□□□ -0.13
CTPS1-202ENST00000372621 ORC2Q13416 577 aaPredicted RBP14.24□□□□□ -0.13
CTPS1-202ENST00000372621 MAPKAPK5Q8IW41 473 aa14.24□□□□□ -0.13
CTPS1-202ENST00000372621 SEMA6BQ9H3T3 888 aa14.24□□□□□ -0.13
CTPS1-202ENST00000372621 MTMR7Q9Y216 660 aa14.24□□□□□ -0.13
CTPS1-202ENST00000372621 ANO9A1A5B4 782 aa14.24□□□□□ -0.13
CTPS1-202ENST00000372621 TARSL2A2RTX5 802 aaKnown RBP14.24□□□□□ -0.13
CTPS1-202ENST00000372621 GNA11P29992 359 aa14.24□□□□□ -0.13
CTPS1-202ENST00000372621 ASIC1P78348 528 aa14.24□□□□□ -0.13
CTPS1-202ENST00000372621 CENPPQ6IPU0 288 aa14.24□□□□□ -0.13
CTPS1-202ENST00000372621 AMIGO3Q86WK7 504 aa14.24□□□□□ -0.13
CTPS1-202ENST00000372621 NEDD1Q8NHV4 660 aa14.24□□□□□ -0.13
CTPS1-202ENST00000372621 RPGRIP1Q96KN7 1286 aa14.24□□□□□ -0.13
CTPS1-202ENST00000372621 NOC4LQ9BVI4 516 aaKnown RBP14.24□□□□□ -0.13
CTPS1-202ENST00000372621 VIPAS39Q9H9C1 493 aa14.24□□□□□ -0.13
CTPS1-202ENST00000372621 C6orf50Q9HD87 102 aa14.24□□□□□ -0.13
CTPS1-202ENST00000372621 ZNF263O14978 683 aa14.23□□□□□ -0.13
CTPS1-202ENST00000372621 ZPR1O75312 459 aa14.23□□□□□ -0.13
CTPS1-202ENST00000372621 TECP42680 631 aa14.23□□□□□ -0.13
CTPS1-202ENST00000372621 CDK8P49336 464 aa14.23□□□□□ -0.13
CTPS1-202ENST00000372621 C15orf52Q6ZUT6 534 aaKnown RBP14.23□□□□□ -0.13
CTPS1-202ENST00000372621 KIAA1328Q86T90 577 aa14.23□□□□□ -0.13
CTPS1-202ENST00000372621 CCDC47Q96A33 483 aaKnown RBP14.23□□□□□ -0.13
CTPS1-202ENST00000372621 ZNHIT6Q9NWK9 470 aaKnown RBP14.23□□□□□ -0.13
CTPS1-202ENST00000372621 SAP30BPQ9UHR5 308 aaKnown RBP14.23□□□□□ -0.13
CTPS1-202ENST00000372621 DUSP10Q9Y6W6 482 aa14.23□□□□□ -0.13
CTPS1-202ENST00000372621 BTAF1O14981 1849 aa14.23□□□□□ -0.13
CTPS1-202ENST00000372621 ZSCAN26Q16670 478 aa14.23□□□□□ -0.13
CTPS1-202ENST00000372621 CNNM4Q6P4Q7 775 aa14.23□□□□□ -0.13
CTPS1-202ENST00000372621 FAM71BQ8TC56 605 aa14.23□□□□□ -0.13
CTPS1-202ENST00000372621 MTMR9Q96QG7 549 aa14.23□□□□□ -0.13
CTPS1-202ENST00000372621 ANKIB1Q9P2G1 1089 aa14.23□□□□□ -0.13
CTPS1-202ENST00000372621 FAN1Q9Y2M0 1017 aa14.23□□□□□ -0.13
CTPS1-202ENST00000372621 FOCADQ5VW36 1801 aa14.23□□□□□ -0.13
CTPS1-202ENST00000372621 LMAN1P49257 510 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 AARSP49588 968 aaKnown RBP eCLIP14.22□□□□□ -0.13
CTPS1-202ENST00000372621 AMPD3Q01432 767 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 NFIXQ14938 502 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 USP17L2Q6R6M4 530 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 GOLGA5Q8TBA6 731 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 TBCKQ8TEA7 893 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 IQCDQ96DY2 449 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 EYA3Q99504 573 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 ZNF287Q9HBT7 754 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 BLOC1S4Q9NUP1 217 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 ESYT2A0FGR8 921 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 MTIF2P46199 727 aaKnown RBP14.22□□□□□ -0.13
CTPS1-202ENST00000372621 GRB10Q13322 594 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 GRAPQ13588 217 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 POTEDQ86YR6 584 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 GRAPLQ8TC17 118 aaPredicted RBP14.22□□□□□ -0.13
CTPS1-202ENST00000372621 HPS3Q969F9 1004 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 RRP36Q96EU6 259 aaKnown RBP14.22□□□□□ -0.13
CTPS1-202ENST00000372621 PLAGL2Q9UPG8 496 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 SIK3Q9Y2K2 1263 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 ZC3H4Q9UPT8 1303 aaKnown RBP14.22□□□□□ -0.13
CTPS1-202ENST00000372621 TAF1LQ8IZX4 1826 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 EDIL3O43854 480 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 LDHCP07864 332 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 VAV2P52735 878 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 CKAP4Q07065 602 aaKnown RBP14.22□□□□□ -0.13
CTPS1-202ENST00000372621 MED4Q9NPJ6 270 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 NHSQ6T4R5 1651 aa14.22□□□□□ -0.13
CTPS1-202ENST00000372621 GPR75-ASB3A0A0A6YYF3 556 aa14.21□□□□□ -0.13
CTPS1-202ENST00000372621 NUTM2BA6NNL0 878 aaPredicted RBP14.21□□□□□ -0.13
CTPS1-202ENST00000372621 NUTM2EB1AL46 878 aaPredicted RBP14.21□□□□□ -0.13
CTPS1-202ENST00000372621 PDE2AO00408 941 aaPredicted RBP14.21□□□□□ -0.13
CTPS1-202ENST00000372621 GNPATO15228 680 aa14.21□□□□□ -0.13
CTPS1-202ENST00000372621 LCA5LO95447 670 aa14.21□□□□□ -0.13
CTPS1-202ENST00000372621 IRX5P78411 483 aaPredicted RBP14.21□□□□□ -0.13
CTPS1-202ENST00000372621 CYP27A1Q02318 531 aa14.21□□□□□ -0.13
CTPS1-202ENST00000372621 CERS3Q8IU89 383 aa14.21□□□□□ -0.13
CTPS1-202ENST00000372621 MCM3P25205 808 aa14.21□□□□□ -0.13
CTPS1-202ENST00000372621 ACTN2P35609 894 aa14.21□□□□□ -0.13
CTPS1-202ENST00000372621 BTDP43251 543 aa14.21□□□□□ -0.13
CTPS1-202ENST00000372621 RAD51AP2Q09MP3 1159 aa14.21□□□□□ -0.13
CTPS1-202ENST00000372621 ZNF804AQ7Z570 1209 aa14.21□□□□□ -0.13
CTPS1-202ENST00000372621 ARHGEF1Q92888 912 aaKnown RBP14.21□□□□□ -0.13
CTPS1-202ENST00000372621 PNMA5Q96PV4 448 aa14.21□□□□□ -0.13
CTPS1-202ENST00000372621 PIGSQ96S52 555 aa14.21□□□□□ -0.13
CTPS1-202ENST00000372621 RIOX1Q9H6W3 641 aa14.21□□□□□ -0.13
CTPS1-202ENST00000372621 ABCB11O95342 1321 aa14.21□□□□□ -0.14
CTPS1-202ENST00000372621 FXR2P51116 673 aaKnown RBP eCLIP14.2□□□□□ -0.14
CTPS1-202ENST00000372621 CALML4Q96GE6 196 aa14.2□□□□□ -0.14
CTPS1-202ENST00000372621 SLC39A2Q9NP94 309 aa14.2□□□□□ -0.14
CTPS1-202ENST00000372621 ARHGAP20Q9P2F6 1191 aa14.2□□□□□ -0.14
CTPS1-202ENST00000372621 PVALEFA0A1B0GWK0 134 aa14.2□□□□□ -0.14
CTPS1-202ENST00000372621 MYMKA6NI61 221 aa14.2□□□□□ -0.14
CTPS1-202ENST00000372621 EPHB6O15197 1021 aa14.2□□□□□ -0.14
CTPS1-202ENST00000372621 ZNF185O15231 689 aa14.2□□□□□ -0.14
CTPS1-202ENST00000372621 RPS6KA5O75582 802 aa14.2□□□□□ -0.14
CTPS1-202ENST00000372621 SYF2O95926 243 aaKnown RBP14.2□□□□□ -0.14
CTPS1-202ENST00000372621 PLEKP08567 350 aaPredicted RBP14.2□□□□□ -0.14
CTPS1-202ENST00000372621 VWA3BQ502W6 1294 aa14.2□□□□□ -0.14
CTPS1-202ENST00000372621 FKBP15Q5T1M5 1219 aa14.2□□□□□ -0.14
CTPS1-202ENST00000372621 UNC13DQ70J99 1090 aa14.2□□□□□ -0.14
CTPS1-202ENST00000372621 REXO1Q8N1G1 1221 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms