RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 GFPT1Q06210 699 aaPredicted RBP13.3□□□□□ -0.28
SNX21-205ENST00000372547 SF3A3Q12874 501 aaKnown RBP eCLIP13.3□□□□□ -0.28
SNX21-205ENST00000372547 STK4Q13043 487 aa13.3□□□□□ -0.28
SNX21-205ENST00000372547 NAA35Q5VZE5 725 aa13.3□□□□□ -0.28
SNX21-205ENST00000372547 EMBQ6PCB8 327 aa13.3□□□□□ -0.28
SNX21-205ENST00000372547 CNPY4Q8N129 248 aa13.3□□□□□ -0.28
SNX21-205ENST00000372547 PROCA1Q8NCQ7 364 aaPredicted RBP13.3□□□□□ -0.28
SNX21-205ENST00000372547 PYM1Q9BRP8 204 aaKnown RBP13.3□□□□□ -0.28
SNX21-205ENST00000372547 TTYH3Q9C0H2 523 aa13.3□□□□□ -0.28
SNX21-205ENST00000372547 TMEM60Q9H2L4 133 aa13.3□□□□□ -0.28
SNX21-205ENST00000372547 PACSIN2Q9UNF0 486 aaPredicted RBP13.3□□□□□ -0.28
SNX21-205ENST00000372547 NID2Q14112 1375 aa13.3□□□□□ -0.28
SNX21-205ENST00000372547 FAM205AQ6ZU69 1335 aa13.3□□□□□ -0.28
SNX21-205ENST00000372547 NUP188Q5SRE5 1749 aa13.3□□□□□ -0.28
SNX21-205ENST00000372547 LONP1P36776 959 aaKnown RBP13.3□□□□□ -0.28
SNX21-205ENST00000372547 ACTN3Q08043 901 aaPredicted RBP13.3□□□□□ -0.28
SNX21-205ENST00000372547 ALS2CLQ60I27 953 aa13.3□□□□□ -0.28
SNX21-205ENST00000372547 CADPS2Q86UW7 1296 aa13.3□□□□□ -0.28
SNX21-205ENST00000372547 PRPF38AQ8NAV1 312 aaKnown RBP13.3□□□□□ -0.28
SNX21-205ENST00000372547 TANGO6Q9C0B7 1094 aa13.3□□□□□ -0.28
SNX21-205ENST00000372547 RBM28Q9NW13 759 aaKnown RBP13.3□□□□□ -0.28
SNX21-205ENST00000372547 CNTNAP5Q8WYK1 1306 aa13.29□□□□□ -0.28
SNX21-205ENST00000372547 CAMTA1Q9Y6Y1 1673 aa13.29□□□□□ -0.28
SNX21-205ENST00000372547 CCDC194A0A1B0GVG4 234 aa13.29□□□□□ -0.28
SNX21-205ENST00000372547 ZNF233A6NK53 670 aa13.29□□□□□ -0.28
SNX21-205ENST00000372547 ERVV-2B6SEH9 535 aa13.29□□□□□ -0.28
SNX21-205ENST00000372547 PDE8AO60658 829 aa13.29□□□□□ -0.28
SNX21-205ENST00000372547 FTCDO95954 541 aa13.29□□□□□ -0.28
SNX21-205ENST00000372547 NR1D1P20393 614 aa13.29□□□□□ -0.28
SNX21-205ENST00000372547 TRIM28Q13263 835 aaKnown RBP13.29□□□□□ -0.28
SNX21-205ENST00000372547 HLTFQ14527 1009 aaKnown RBP eCLIP13.29□□□□□ -0.28
SNX21-205ENST00000372547 INF2Q27J81 1249 aa13.29□□□□□ -0.28
SNX21-205ENST00000372547 EP400NLQ6ZTU2 488 aa13.29□□□□□ -0.28
SNX21-205ENST00000372547 ZNF473Q8WTR7 871 aaKnown RBP13.29□□□□□ -0.28
SNX21-205ENST00000372547 P2RX5Q93086 422 aa13.29□□□□□ -0.28
SNX21-205ENST00000372547 KRT12Q99456 494 aa13.29□□□□□ -0.28
SNX21-205ENST00000372547 SLC39A2Q9NP94 309 aa13.29□□□□□ -0.28
SNX21-205ENST00000372547 TRPM3Q9HCF6 1732 aaPredicted RBP13.29□□□□□ -0.28
SNX21-205ENST00000372547 LRP6O75581 1613 aa13.29□□□□□ -0.28
SNX21-205ENST00000372547 MYH2Q9UKX2 1941 aa13.29□□□□□ -0.28
SNX21-205ENST00000372547 BCL9LQ86UU0 1499 aa13.29□□□□□ -0.28
SNX21-205ENST00000372547 TCP1P17987 556 aaKnown RBP13.29□□□□□ -0.28
SNX21-205ENST00000372547 ARID5AQ03989 594 aa13.29□□□□□ -0.28
SNX21-205ENST00000372547 SF3B2Q13435 895 aaKnown RBP13.29□□□□□ -0.28
SNX21-205ENST00000372547 CEP57Q86XR8 500 aa13.29□□□□□ -0.28
SNX21-205ENST00000372547 KLHL7Q8IXQ5 586 aa13.29□□□□□ -0.28
SNX21-205ENST00000372547 GIMAP7Q8NHV1 300 aa13.29□□□□□ -0.28
SNX21-205ENST00000372547 PURBQ96QR8 312 aaKnown RBP13.29□□□□□ -0.28
SNX21-205ENST00000372547 NLRC4Q9NPP4 1024 aa13.29□□□□□ -0.28
SNX21-205ENST00000372547 WTIPA6NIX2 430 aaPredicted RBP13.28□□□□□ -0.28
SNX21-205ENST00000372547 LRRC53A6NM62 1247 aa13.28□□□□□ -0.28
SNX21-205ENST00000372547 USP17L12C9JPN9 530 aa13.28□□□□□ -0.28
SNX21-205ENST00000372547 USP17L21D6R901 530 aa13.28□□□□□ -0.28
SNX21-205ENST00000372547 KLRC4O43908 158 aa13.28□□□□□ -0.28
SNX21-205ENST00000372547 FGFR2P21802 821 aa13.28□□□□□ -0.28
SNX21-205ENST00000372547 CEP85LQ5SZL2 805 aa13.28□□□□□ -0.28
SNX21-205ENST00000372547 CACNA2D4Q7Z3S7 1137 aa13.28□□□□□ -0.28
SNX21-205ENST00000372547 IFT20Q8IY31 132 aa13.28□□□□□ -0.28
SNX21-205ENST00000372547 GIMAP8Q8ND71 665 aaPredicted RBP13.28□□□□□ -0.28
SNX21-205ENST00000372547 STARD3NLO95772 234 aa13.28□□□□□ -0.28
SNX21-205ENST00000372547 PPP2R5BQ15173 497 aa13.28□□□□□ -0.28
SNX21-205ENST00000372547 MIIPQ5JXC2 388 aa13.28□□□□□ -0.28
SNX21-205ENST00000372547 MICALCLQ6ZW33 695 aa13.28□□□□□ -0.28
SNX21-205ENST00000372547 BRINP3Q76B58 766 aa13.28□□□□□ -0.28
SNX21-205ENST00000372547 BLIDQ8IZY5 108 aa13.28□□□□□ -0.28
SNX21-205ENST00000372547 CCDC155Q8N6L0 562 aa13.28□□□□□ -0.28
SNX21-205ENST00000372547 OR2W6PQ8NHA6 318 aa13.28□□□□□ -0.28
SNX21-205ENST00000372547 LRRC15Q8TF66 581 aa13.28□□□□□ -0.28
SNX21-205ENST00000372547 MTMR8Q96EF0 704 aa13.28□□□□□ -0.28
SNX21-205ENST00000372547 FAM212AQ96EL1 285 aa13.28□□□□□ -0.28
SNX21-205ENST00000372547 CCT8L2Q96SF2 557 aa13.28□□□□□ -0.28
SNX21-205ENST00000372547 EPN3Q9H201 632 aa13.28□□□□□ -0.28
SNX21-205ENST00000372547 MROH5Q6ZUA9 1318 aa13.28□□□□□ -0.28
SNX21-205ENST00000372547 CCDC172P0C7W6 258 aa13.27□□□□□ -0.28
SNX21-205ENST00000372547 PLCG1P19174 1290 aa13.27□□□□□ -0.28
SNX21-205ENST00000372547 SLC1A4P43007 532 aa13.27□□□□□ -0.28
SNX21-205ENST00000372547 SKOR1P84550 965 aa13.27□□□□□ -0.28
SNX21-205ENST00000372547 CCDC47Q96A33 483 aaKnown RBP13.27□□□□□ -0.28
SNX21-205ENST00000372547 PNPLA7Q6ZV29 1317 aa13.27□□□□□ -0.28
SNX21-205ENST00000372547 PPP1R37O75864 691 aa13.27□□□□□ -0.29
SNX21-205ENST00000372547 CCNE1P24864 410 aa13.27□□□□□ -0.29
SNX21-205ENST00000372547 GYG1P46976 350 aa13.27□□□□□ -0.29
SNX21-205ENST00000372547 FNTAP49354 379 aa13.27□□□□□ -0.29
SNX21-205ENST00000372547 CDR1P51861 262 aa13.27□□□□□ -0.29
SNX21-205ENST00000372547 RCAN1P53805 252 aa13.27□□□□□ -0.29
SNX21-205ENST00000372547 GSCP56915 257 aaPredicted RBP13.27□□□□□ -0.29
SNX21-205ENST00000372547 CFAP221Q4G0U5 840 aa13.27□□□□□ -0.29
SNX21-205ENST00000372547 ODF2Q5BJF6 829 aa13.27□□□□□ -0.29
SNX21-205ENST00000372547 NLRP14Q86W24 1093 aa13.27□□□□□ -0.29
SNX21-205ENST00000372547 RETREG2Q8NC44 543 aa13.27□□□□□ -0.29
SNX21-205ENST00000372547 CCDC114Q96M63 670 aa13.27□□□□□ -0.29
SNX21-205ENST00000372547 TLR10Q9BXR5 811 aa13.27□□□□□ -0.29
SNX21-205ENST00000372547 GLI3P10071 1580 aa13.27□□□□□ -0.29
SNX21-205ENST00000372547 TNS3Q68CZ2 1445 aa13.27□□□□□ -0.29
SNX21-205ENST00000372547 ECM2O94769 699 aaPredicted RBP13.26□□□□□ -0.29
SNX21-205ENST00000372547 RHOBTB3O94955 611 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 CALM1P0DP23 149 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 CALM2P0DP24 149 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 CALM3P0DP25 149 aa13.26□□□□□ -0.29
SNX21-205ENST00000372547 ZNF662Q6ZS27 426 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms