RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 HSD17B4P51659 736 aa18.15■□□□□ 0.5
TMEM53-204ENST00000372243 NR5A1Q13285 461 aa18.15■□□□□ 0.5
TMEM53-204ENST00000372243 AP3B2Q13367 1082 aa18.15■□□□□ 0.5
TMEM53-204ENST00000372243 C17orf99Q6UX52 265 aa18.15■□□□□ 0.5
TMEM53-204ENST00000372243 HOMER2Q9NSB8 354 aa18.15■□□□□ 0.5
TMEM53-204ENST00000372243 PEX10O60683 326 aa18.14■□□□□ 0.49
TMEM53-204ENST00000372243 CFBP00751 764 aa18.14■□□□□ 0.49
TMEM53-204ENST00000372243 FOSP01100 380 aaPredicted RBP18.14■□□□□ 0.49
TMEM53-204ENST00000372243 CRHR2Q13324 411 aa18.14■□□□□ 0.49
TMEM53-204ENST00000372243 KRT25Q7Z3Z0 450 aa18.14■□□□□ 0.49
TMEM53-204ENST00000372243 FERMT3Q86UX7 667 aa18.14■□□□□ 0.49
TMEM53-204ENST00000372243 ATP6V1DQ9Y5K8 247 aa18.14■□□□□ 0.49
TMEM53-204ENST00000372243 ADAMTS3O15072 1205 aa18.13■□□□□ 0.49
TMEM53-204ENST00000372243 ERCC3P19447 782 aa18.13■□□□□ 0.49
TMEM53-204ENST00000372243 USP17L6PQ6QN14 398 aa18.13■□□□□ 0.49
TMEM53-204ENST00000372243 NCAPG2Q86XI2 1143 aa18.13■□□□□ 0.49
TMEM53-204ENST00000372243 BIN2Q9UBW5 565 aaPredicted RBP18.13■□□□□ 0.49
TMEM53-204ENST00000372243 UBE2SQ16763 222 aa18.13■□□□□ 0.49
TMEM53-204ENST00000372243 RNF207Q6ZRF8 634 aa18.13■□□□□ 0.49
TMEM53-204ENST00000372243 TBC1D5Q92609 795 aa18.13■□□□□ 0.49
TMEM53-204ENST00000372243 CPA4Q9UI42 421 aa18.13■□□□□ 0.49
TMEM53-204ENST00000372243 PFASO15067 1338 aa18.12■□□□□ 0.49
TMEM53-204ENST00000372243 CCDC194A0A1B0GVG4 234 aa18.12■□□□□ 0.49
TMEM53-204ENST00000372243 RPS6P62753 249 aaKnown RBP18.12■□□□□ 0.49
TMEM53-204ENST00000372243 FOXD4L5Q5VV16 416 aaPredicted RBP18.12■□□□□ 0.49
TMEM53-204ENST00000372243 RASGRP4Q8TDF6 673 aa18.12■□□□□ 0.49
TMEM53-204ENST00000372243 FOXD4L4Q8WXT5 416 aaPredicted RBP18.12■□□□□ 0.49
TMEM53-204ENST00000372243 PORCNQ9H237 461 aa18.12■□□□□ 0.49
TMEM53-204ENST00000372243 A1CFQ9NQ94 594 aaKnown RBP18.12■□□□□ 0.49
TMEM53-204ENST00000372243 SPDYE3A6NKU9 549 aa18.11■□□□□ 0.49
TMEM53-204ENST00000372243 MAPK4P31152 587 aa18.11■□□□□ 0.49
TMEM53-204ENST00000372243 HOXA13P31271 388 aaPredicted RBP18.11■□□□□ 0.49
TMEM53-204ENST00000372243 NONOQ15233 471 aaKnown RBP eCLIP18.11■□□□□ 0.49
TMEM53-204ENST00000372243 RILPL1Q5EBL4 403 aa18.11■□□□□ 0.49
TMEM53-204ENST00000372243 MYSM1Q5VVJ2 828 aa18.11■□□□□ 0.49
TMEM53-204ENST00000372243 JAKMIP3Q5VZ66 844 aa18.11■□□□□ 0.49
TMEM53-204ENST00000372243 NSMFQ6X4W1 530 aa18.11■□□□□ 0.49
TMEM53-204ENST00000372243 TMEM260Q9NX78 707 aa18.11■□□□□ 0.49
TMEM53-204ENST00000372243 CYP39A1Q9NYL5 469 aa18.11■□□□□ 0.49
TMEM53-204ENST00000372243 MYH15Q9Y2K3 1946 aa18.11■□□□□ 0.49
TMEM53-204ENST00000372243 STRNO43815 780 aa18.1■□□□□ 0.49
TMEM53-204ENST00000372243 TRAPPC10P48553 1259 aa18.1■□□□□ 0.49
TMEM53-204ENST00000372243 EARS2Q5JPH6 523 aaKnown RBP18.1■□□□□ 0.49
TMEM53-204ENST00000372243 PIK3AP1Q6ZUJ8 805 aa18.1■□□□□ 0.49
TMEM53-204ENST00000372243 ABRAQ8N0Z2 381 aa18.1■□□□□ 0.49
TMEM53-204ENST00000372243 ANKRD35Q8N283 1001 aa18.1■□□□□ 0.49
TMEM53-204ENST00000372243 SYTL5Q8TDW5 730 aaPredicted RBP18.1■□□□□ 0.49
TMEM53-204ENST00000372243 ANO3Q9BYT9 981 aa18.1■□□□□ 0.49
TMEM53-204ENST00000372243 EFCC1Q9HA90 598 aa18.1■□□□□ 0.49
TMEM53-204ENST00000372243 RNF186Q9NXI6 227 aa18.1■□□□□ 0.49
TMEM53-204ENST00000372243 FCER1AP12319 257 aa18.09■□□□□ 0.49
TMEM53-204ENST00000372243 BAATQ14032 418 aaPredicted RBP18.09■□□□□ 0.49
TMEM53-204ENST00000372243 ATL3Q6DD88 541 aa18.09■□□□□ 0.49
TMEM53-204ENST00000372243 SLC30A10Q6XR72 485 aa18.09■□□□□ 0.49
TMEM53-204ENST00000372243 CCAR1Q8IX12 1150 aaKnown RBP18.09■□□□□ 0.49
TMEM53-204ENST00000372243 TNPO1Q92973 898 aaKnown RBP18.09■□□□□ 0.49
TMEM53-204ENST00000372243 EHMT1Q9H9B1 1298 aa18.09■□□□□ 0.49
TMEM53-204ENST00000372243 SAGE1Q9NXZ1 904 aa18.09■□□□□ 0.49
TMEM53-204ENST00000372243 NOL7Q9UMY1 257 aaKnown RBP18.09■□□□□ 0.49
TMEM53-204ENST00000372243 KCTD2Q14681 263 aa18.08■□□□□ 0.49
TMEM53-204ENST00000372243 NOM1Q5C9Z4 860 aaKnown RBP18.08■□□□□ 0.49
TMEM53-204ENST00000372243 COL20A1Q9P218 1284 aa18.08■□□□□ 0.49
TMEM53-204ENST00000372243 FRMPD4Q14CM0 1322 aa18.08■□□□□ 0.48
TMEM53-204ENST00000372243 FAM205CA6NFA0 338 aa18.08■□□□□ 0.48
TMEM53-204ENST00000372243 SREBF1P36956 1147 aa18.08■□□□□ 0.48
TMEM53-204ENST00000372243 FAM173BQ6P4H8 233 aa18.08■□□□□ 0.48
TMEM53-204ENST00000372243 CLEC17AQ6ZS10 378 aa18.08■□□□□ 0.48
TMEM53-204ENST00000372243 GPR142Q7Z601 462 aa18.08■□□□□ 0.48
TMEM53-204ENST00000372243 FCHSD1Q86WN1 690 aa18.08■□□□□ 0.48
TMEM53-204ENST00000372243 TBCKQ8TEA7 893 aa18.08■□□□□ 0.48
TMEM53-204ENST00000372243 CRYGNQ8WXF5 182 aa18.08■□□□□ 0.48
TMEM53-204ENST00000372243 ZNF396Q96N95 335 aaPredicted RBP18.08■□□□□ 0.48
TMEM53-204ENST00000372243 MMP19Q99542 508 aa18.08■□□□□ 0.48
TMEM53-204ENST00000372243 R3HDMLQ9H3Y0 253 aa18.08■□□□□ 0.48
TMEM53-204ENST00000372243 IVNS1ABPQ9Y6Y0 642 aa18.08■□□□□ 0.48
TMEM53-204ENST00000372243 PLXNB2O15031 1838 aa18.08■□□□□ 0.48
TMEM53-204ENST00000372243 RPTORQ8N122 1335 aa18.07■□□□□ 0.48
TMEM53-204ENST00000372243 ZNF236Q9UL36 1845 aa18.07■□□□□ 0.48
TMEM53-204ENST00000372243 DNAJC25-GNG10A0A024R161 153 aa18.07■□□□□ 0.48
TMEM53-204ENST00000372243 TRPA1O75762 1119 aa18.07■□□□□ 0.48
TMEM53-204ENST00000372243 TOB1P50616 345 aaPredicted RBP18.07■□□□□ 0.48
TMEM53-204ENST00000372243 USP11P51784 963 aa18.07■□□□□ 0.48
TMEM53-204ENST00000372243 MAP2K1Q02750 393 aaPredicted RBP18.07■□□□□ 0.48
TMEM53-204ENST00000372243 INF2Q27J81 1249 aa18.07■□□□□ 0.48
TMEM53-204ENST00000372243 WDR78Q5VTH9 848 aa18.07■□□□□ 0.48
TMEM53-204ENST00000372243 NEK8Q86SG6 692 aa18.07■□□□□ 0.48
TMEM53-204ENST00000372243 DNERQ8NFT8 737 aa18.07■□□□□ 0.48
TMEM53-204ENST00000372243 PGBD1Q96JS3 809 aa18.07■□□□□ 0.48
TMEM53-204ENST00000372243 CYP3A4P08684 503 aa18.06■□□□□ 0.48
TMEM53-204ENST00000372243 PTPREP23469 700 aa18.06■□□□□ 0.48
TMEM53-204ENST00000372243 ORC2Q13416 577 aaPredicted RBP18.06■□□□□ 0.48
TMEM53-204ENST00000372243 PLEKHH3Q7Z736 793 aa18.06■□□□□ 0.48
TMEM53-204ENST00000372243 FAM133AQ8N9E0 248 aa18.06■□□□□ 0.48
TMEM53-204ENST00000372243 TAAR1Q96RJ0 339 aa18.06■□□□□ 0.48
TMEM53-204ENST00000372243 NAP1L4Q99733 375 aaKnown RBP18.06■□□□□ 0.48
TMEM53-204ENST00000372243 CFAP45Q9UL16 551 aa18.06■□□□□ 0.48
TMEM53-204ENST00000372243 LCTP09848 1927 aa18.06■□□□□ 0.48
TMEM53-204ENST00000372243 MYH7BA7E2Y1 1941 aa18.05■□□□□ 0.48
TMEM53-204ENST00000372243 ZNFX1Q9P2E3 1918 aaKnown RBP18.05■□□□□ 0.48
TMEM53-204ENST00000372243 POTEB2H3BUK9 544 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms