RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 EFCAB8A8MWE9 144 aa23.08■■□□□ 1.29
VEGFA-204ENST00000372064 TDP2O95551 362 aa23.08■■□□□ 1.29
VEGFA-204ENST00000372064 PODNQ7Z5L7 613 aa23.08■■□□□ 1.29
VEGFA-204ENST00000372064 MB21D1Q8N884 522 aa23.08■■□□□ 1.29
VEGFA-204ENST00000372064 SLC37A4O43826 429 aa23.08■■□□□ 1.28
VEGFA-204ENST00000372064 ERVK-24P63145 666 aa23.08■■□□□ 1.28
VEGFA-204ENST00000372064 AMPD3Q01432 767 aa23.08■■□□□ 1.28
VEGFA-204ENST00000372064 CCDC96Q2M329 555 aa23.08■■□□□ 1.28
VEGFA-204ENST00000372064 CCDC47Q96A33 483 aaKnown RBP23.08■■□□□ 1.28
VEGFA-204ENST00000372064 DUSP9Q99956 384 aaKnown RBP23.08■■□□□ 1.28
VEGFA-204ENST00000372064 DNAJC18Q9H819 358 aa23.08■■□□□ 1.28
VEGFA-204ENST00000372064 RIC8AQ9NPQ8 531 aa23.08■■□□□ 1.28
VEGFA-204ENST00000372064 FAM196BA6NMK8 535 aa23.07■■□□□ 1.28
VEGFA-204ENST00000372064 PPP1R2P41236 205 aa23.07■■□□□ 1.28
VEGFA-204ENST00000372064 TCP10Q12799 353 aa23.07■■□□□ 1.28
VEGFA-204ENST00000372064 CALCRLQ16602 461 aa23.07■■□□□ 1.28
VEGFA-204ENST00000372064 KCTD1Q719H9 257 aa23.07■■□□□ 1.28
VEGFA-204ENST00000372064 MNS1Q8NEH6 495 aa23.07■■□□□ 1.28
VEGFA-204ENST00000372064 CALML4Q96GE6 196 aa23.07■■□□□ 1.28
VEGFA-204ENST00000372064 TRIM47Q96LD4 638 aa23.07■■□□□ 1.28
VEGFA-204ENST00000372064 NUP88Q99567 741 aaPredicted RBP23.07■■□□□ 1.28
VEGFA-204ENST00000372064 CARD6Q9BX69 1037 aa23.07■■□□□ 1.28
VEGFA-204ENST00000372064 EHD4Q9H223 541 aa23.07■■□□□ 1.28
VEGFA-204ENST00000372064 CLK2P49760 499 aaKnown RBP23.07■■□□□ 1.28
VEGFA-204ENST00000372064 UBE2SQ16763 222 aa23.07■■□□□ 1.28
VEGFA-204ENST00000372064 EXOC1Q9NV70 894 aa23.07■■□□□ 1.28
VEGFA-204ENST00000372064 PDE4DQ08499 809 aa23.06■■□□□ 1.28
VEGFA-204ENST00000372064 CYP26C1Q6V0L0 522 aa23.06■■□□□ 1.28
VEGFA-204ENST00000372064 ZDHHC15Q96MV8 337 aa23.06■■□□□ 1.28
VEGFA-204ENST00000372064 ZNF219Q9P2Y4 722 aaPredicted RBP23.06■■□□□ 1.28
VEGFA-204ENST00000372064 CCNE1P24864 410 aa23.06■■□□□ 1.28
VEGFA-204ENST00000372064 GRB10Q13322 594 aa23.06■■□□□ 1.28
VEGFA-204ENST00000372064 SHROOM1Q2M3G4 852 aaPredicted RBP23.06■■□□□ 1.28
VEGFA-204ENST00000372064 C2CD5Q86YS7 1000 aa23.06■■□□□ 1.28
VEGFA-204ENST00000372064 FLAD1Q8NFF5 587 aa23.06■■□□□ 1.28
VEGFA-204ENST00000372064 UBXN4Q92575 508 aa23.06■■□□□ 1.28
VEGFA-204ENST00000372064 P2RX5Q93086 422 aa23.06■■□□□ 1.28
VEGFA-204ENST00000372064 MTMR8Q96EF0 704 aa23.06■■□□□ 1.28
VEGFA-204ENST00000372064 BICDL2A1A5D9 508 aa23.05■■□□□ 1.28
VEGFA-204ENST00000372064 USP17L10C9JJH3 530 aa23.05■■□□□ 1.28
VEGFA-204ENST00000372064 TNNI2P48788 182 aa23.05■■□□□ 1.28
VEGFA-204ENST00000372064 ASIC1P78348 528 aa23.05■■□□□ 1.28
VEGFA-204ENST00000372064 ARHGAP29Q52LW3 1261 aa23.05■■□□□ 1.28
VEGFA-204ENST00000372064 GPATCH4Q5T3I0 446 aaKnown RBP23.05■■□□□ 1.28
VEGFA-204ENST00000372064 FAM53CQ9NYF3 392 aa23.05■■□□□ 1.28
VEGFA-204ENST00000372064 STK17AQ9UEE5 414 aa23.05■■□□□ 1.28
VEGFA-204ENST00000372064 STK4Q13043 487 aa23.05■■□□□ 1.28
VEGFA-204ENST00000372064 PDIA5Q14554 519 aa23.05■■□□□ 1.28
VEGFA-204ENST00000372064 LZTFL1Q9NQ48 299 aa23.05■■□□□ 1.28
VEGFA-204ENST00000372064 A0A0U1RQJ8 604 aa23.05■■□□□ 1.28
VEGFA-204ENST00000372064 PPP4R3AQ6IN85 833 aa23.05■■□□□ 1.28
VEGFA-204ENST00000372064 ATRIPQ8WXE1 791 aa23.05■■□□□ 1.28
VEGFA-204ENST00000372064 IRX2Q9BZI1 471 aaPredicted RBP23.05■■□□□ 1.28
VEGFA-204ENST00000372064 BLOC1S4Q9NUP1 217 aa23.05■■□□□ 1.28
VEGFA-204ENST00000372064 LRWD1Q9UFC0 647 aa23.05■■□□□ 1.28
VEGFA-204ENST00000372064 KRT9P35527 623 aa23.04■■□□□ 1.28
VEGFA-204ENST00000372064 PNMA5Q96PV4 448 aa23.04■■□□□ 1.28
VEGFA-204ENST00000372064 MAGEC2Q9UBF1 373 aaPredicted RBP23.04■■□□□ 1.28
VEGFA-204ENST00000372064 MYH4Q9Y623 1939 aa23.04■■□□□ 1.28
VEGFA-204ENST00000372064 SIPA1L1O43166 1804 aa23.04■■□□□ 1.28
VEGFA-204ENST00000372064 DDTLA6NHG4 134 aaPredicted RBP23.04■■□□□ 1.28
VEGFA-204ENST00000372064 RBM5P52756 815 aaKnown RBP eCLIP23.04■■□□□ 1.281e-9■□□□□ 9.1
VEGFA-204ENST00000372064 TMEM266Q2M3C6 531 aa23.04■■□□□ 1.28
VEGFA-204ENST00000372064 CSGALNACT2Q8N6G5 542 aa23.04■■□□□ 1.28
VEGFA-204ENST00000372064 CCDC17Q96LX7 622 aa23.04■■□□□ 1.28
VEGFA-204ENST00000372064 ZNF446Q9NWS9 450 aa23.04■■□□□ 1.28
VEGFA-204ENST00000372064 DACT2Q5SW24 774 aa23.03■■□□□ 1.28
VEGFA-204ENST00000372064 CNNM4Q6P4Q7 775 aa23.03■■□□□ 1.28
VEGFA-204ENST00000372064 DNAJC7Q99615 494 aa23.03■■□□□ 1.28
VEGFA-204ENST00000372064 KIF5CO60282 957 aa23.03■■□□□ 1.28
VEGFA-204ENST00000372064 FCER1AP12319 257 aa23.03■■□□□ 1.28
VEGFA-204ENST00000372064 DNM2P50570 870 aa23.03■■□□□ 1.28
VEGFA-204ENST00000372064 PPP2R3AQ06190 1150 aa23.03■■□□□ 1.28
VEGFA-204ENST00000372064 STRIP1Q5VSL9 837 aa23.03■■□□□ 1.28
VEGFA-204ENST00000372064 ANKRD40Q6AI12 368 aa23.03■■□□□ 1.28
VEGFA-204ENST00000372064 SV2BQ7L1I2 683 aa23.03■■□□□ 1.28
VEGFA-204ENST00000372064 MRIQ9BWK5 157 aa23.03■■□□□ 1.28
VEGFA-204ENST00000372064 FAM198AQ9UFP1 575 aa23.03■■□□□ 1.28
VEGFA-204ENST00000372064 POTEMA6NI47 508 aa23.02■■□□□ 1.28
VEGFA-204ENST00000372064 ZBTB5O15062 677 aa23.02■■□□□ 1.28
VEGFA-204ENST00000372064 RAD21O60216 631 aa23.02■■□□□ 1.28
VEGFA-204ENST00000372064 KIAA0895Q8NCT3 520 aa23.02■■□□□ 1.28
VEGFA-204ENST00000372064 EEF2KMTQ96G04 330 aa23.02■■□□□ 1.28
VEGFA-204ENST00000372064 RAB34Q9BZG1 259 aa23.02■■□□□ 1.28
VEGFA-204ENST00000372064 CAPN11Q9UMQ6 739 aa23.02■■□□□ 1.28
VEGFA-204ENST00000372064 TTC26A0AVF1 554 aa23.02■■□□□ 1.28
VEGFA-204ENST00000372064 ECE2O60344 883 aa23.02■■□□□ 1.28
VEGFA-204ENST00000372064 ACRBPQ8NEB7 543 aa23.02■■□□□ 1.28
VEGFA-204ENST00000372064 HPS3Q969F9 1004 aa23.02■■□□□ 1.28
VEGFA-204ENST00000372064 SH3BP5LQ7L8J4 393 aa23.02■■□□□ 1.27
VEGFA-204ENST00000372064 CUL5Q93034 780 aa23.02■■□□□ 1.27
VEGFA-204ENST00000372064 TUBGCP2Q9BSJ2 902 aa23.02■■□□□ 1.27
VEGFA-204ENST00000372064 ZNF646O15015 1829 aaPredicted RBP23.01■■□□□ 1.27
VEGFA-204ENST00000372064 PVALEFA0A1B0GWK0 134 aa23.01■■□□□ 1.27
VEGFA-204ENST00000372064 FKBP1AP62942 108 aaKnown RBP23.01■■□□□ 1.27
VEGFA-204ENST00000372064 RSRC2Q7L4I2 434 aaKnown RBP23.01■■□□□ 1.27
VEGFA-204ENST00000372064 FAM114A1Q8IWE2 563 aa23.01■■□□□ 1.27
VEGFA-204ENST00000372064 ZSCAN29Q8IWY8 852 aaPredicted RBP23.01■■□□□ 1.27
VEGFA-204ENST00000372064 NUDT12Q9BQG2 462 aa23.01■■□□□ 1.27
VEGFA-204ENST00000372064 H0YIN7 160 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms