RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 C1QTNF1Q9BXJ1 281 aa17.36■□□□□ 0.37
LMO4-201ENST00000370542 RNF146Q9NTX7 359 aa17.36■□□□□ 0.37
LMO4-201ENST00000370542 NOL7Q9UMY1 257 aaKnown RBP17.36■□□□□ 0.37
LMO4-201ENST00000370542 SOWAHBA6NEL2 793 aa17.35■□□□□ 0.37
LMO4-201ENST00000370542 DYNC1I1O14576 645 aa17.35■□□□□ 0.37
LMO4-201ENST00000370542 CTAGE5O15320 804 aa17.35■□□□□ 0.37
LMO4-201ENST00000370542 TOP1P11387 765 aaKnown RBP17.35■□□□□ 0.37
LMO4-201ENST00000370542 ITGB8P26012 769 aa17.35■□□□□ 0.37
LMO4-201ENST00000370542 NT5C2P49902 561 aa17.35■□□□□ 0.37
LMO4-201ENST00000370542 CDK7P50613 346 aa17.35■□□□□ 0.37
LMO4-201ENST00000370542 CNTN2Q02246 1040 aa17.35■□□□□ 0.37
LMO4-201ENST00000370542 GRIN2CQ14957 1233 aa17.35■□□□□ 0.37
LMO4-201ENST00000370542 KCNA10Q16322 511 aa17.35■□□□□ 0.37
LMO4-201ENST00000370542 RASGRP2Q7LDG7 609 aa17.35■□□□□ 0.37
LMO4-201ENST00000370542 GAS2L3Q86XJ1 694 aa17.35■□□□□ 0.37
LMO4-201ENST00000370542 MORC4Q8TE76 937 aa17.35■□□□□ 0.37
LMO4-201ENST00000370542 NUP133Q8WUM0 1156 aa17.35■□□□□ 0.37
LMO4-201ENST00000370542 BADQ92934 168 aa17.35■□□□□ 0.37
LMO4-201ENST00000370542 TTC14Q96N46 770 aa17.35■□□□□ 0.37
LMO4-201ENST00000370542 TRERF1Q96PN7 1200 aa17.35■□□□□ 0.37
LMO4-201ENST00000370542 TMEM47Q9BQJ4 181 aa17.35■□□□□ 0.37
LMO4-201ENST00000370542 RANBP17Q9H2T7 1088 aaKnown RBP17.35■□□□□ 0.37
LMO4-201ENST00000370542 ZHX1Q9UKY1 873 aaPredicted RBP17.35■□□□□ 0.37
LMO4-201ENST00000370542 ASTN1O14525 1302 aa17.35■□□□□ 0.37
LMO4-201ENST00000370542 ELP1O95163 1332 aa17.35■□□□□ 0.37
LMO4-201ENST00000370542 CCDC171Q6TFL3 1326 aa17.35■□□□□ 0.37
LMO4-201ENST00000370542 PIEZO1Q92508 2521 aa17.35■□□□□ 0.37
LMO4-201ENST00000370542 MYADML2A6NDP7 307 aa17.34■□□□□ 0.37
LMO4-201ENST00000370542 ASB14A6NK59 587 aa17.34■□□□□ 0.37
LMO4-201ENST00000370542 BAG4O95429 457 aaKnown RBP17.34■□□□□ 0.37
LMO4-201ENST00000370542 MYCNP04198 464 aaPredicted RBP17.34■□□□□ 0.37
LMO4-201ENST00000370542 ICAM1P05362 532 aa17.34■□□□□ 0.37
LMO4-201ENST00000370542 CLTBP09497 229 aa17.34■□□□□ 0.37
LMO4-201ENST00000370542 SNHG28P0DPA3 235 aa17.34■□□□□ 0.37
LMO4-201ENST00000370542 SDSP20132 328 aa17.34■□□□□ 0.37
LMO4-201ENST00000370542 AKNAD1Q5T1N1 836 aa17.34■□□□□ 0.37
LMO4-201ENST00000370542 PCSK9Q8NBP7 692 aaKnown RBP17.34■□□□□ 0.37
LMO4-201ENST00000370542 SNX27Q96L92 541 aa17.34■□□□□ 0.37
LMO4-201ENST00000370542 UHRF1Q96T88 793 aaPredicted RBP17.34■□□□□ 0.37
LMO4-201ENST00000370542 HOMER2Q9NSB8 354 aa17.34■□□□□ 0.37
LMO4-201ENST00000370542 CYP39A1Q9NYL5 469 aa17.34■□□□□ 0.37
LMO4-201ENST00000370542 CCDC39Q9UFE4 941 aa17.34■□□□□ 0.37
LMO4-201ENST00000370542 GNEQ9Y223 722 aaKnown RBP17.34■□□□□ 0.37
LMO4-201ENST00000370542 FAAP100Q0VG06 881 aa17.33■□□□□ 0.36
LMO4-201ENST00000370542 MUM1L1Q5H9M0 696 aa17.33■□□□□ 0.36
LMO4-201ENST00000370542 PDLIM2Q96JY6 352 aa17.33■□□□□ 0.36
LMO4-201ENST00000370542 STARD7Q9NQZ5 370 aa17.33■□□□□ 0.36
LMO4-201ENST00000370542 LCTP09848 1927 aa17.33■□□□□ 0.36
LMO4-201ENST00000370542 LOC102724159A0A0B4J2E5 919 aa17.32■□□□□ 0.36
LMO4-201ENST00000370542 PDHBP11177 359 aa17.32■□□□□ 0.36
LMO4-201ENST00000370542 ALAS1P13196 640 aa17.32■□□□□ 0.36
LMO4-201ENST00000370542 IRX5P78411 483 aaPredicted RBP17.32■□□□□ 0.36
LMO4-201ENST00000370542 IKQ13123 557 aaPredicted RBP17.32■□□□□ 0.36
LMO4-201ENST00000370542 PWP2Q15269 919 aaKnown RBP17.32■□□□□ 0.36
LMO4-201ENST00000370542 TTBK2Q6IQ55 1244 aa17.32■□□□□ 0.36
LMO4-201ENST00000370542 PRDM5Q9NQX1 630 aaPredicted RBP17.32■□□□□ 0.36
LMO4-201ENST00000370542 TBX21Q9UL17 535 aa17.32■□□□□ 0.36
LMO4-201ENST00000370542 NCOR1O75376 2440 aa17.31■□□□□ 0.36
LMO4-201ENST00000370542 TRIM6-TRIM34B2RNG4 842 aa17.31■□□□□ 0.36
LMO4-201ENST00000370542 ASGR1P07306 291 aa17.31■□□□□ 0.36
LMO4-201ENST00000370542 TAPT1Q6NXT6 567 aa17.31■□□□□ 0.36
LMO4-201ENST00000370542 CCDC174Q6PII3 467 aa17.31■□□□□ 0.36
LMO4-201ENST00000370542 MFSD6Q6ZSS7 791 aa17.31■□□□□ 0.36
LMO4-201ENST00000370542 TBC1D10CQ8IV04 446 aa17.31■□□□□ 0.36
LMO4-201ENST00000370542 SMAP1Q8IYB5 467 aaPredicted RBP17.31■□□□□ 0.36
LMO4-201ENST00000370542 RILPL2Q969X0 211 aa17.31■□□□□ 0.36
LMO4-201ENST00000370542 GLT1D1Q96MS3 346 aa17.31■□□□□ 0.36
LMO4-201ENST00000370542 KIF2CQ99661 725 aa17.31■□□□□ 0.36
LMO4-201ENST00000370542 SPC25Q9HBM1 224 aa17.31■□□□□ 0.36
LMO4-201ENST00000370542 Q9Y3F1 56 aa17.31■□□□□ 0.36
LMO4-201ENST00000370542 LRRC37A2A6NM11 1700 aa17.3■□□□□ 0.36
LMO4-201ENST00000370542 MROH7Q68CQ1 1323 aa17.3■□□□□ 0.36
LMO4-201ENST00000370542 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.3■□□□□ 0.36
LMO4-201ENST00000370542 MBD3O95983 291 aa17.3■□□□□ 0.36
LMO4-201ENST00000370542 C6orf222P0C671 652 aaPredicted RBP17.3■□□□□ 0.36
LMO4-201ENST00000370542 SNAP25P60880 206 aa17.3■□□□□ 0.36
LMO4-201ENST00000370542 HAND2P61296 217 aa17.3■□□□□ 0.36
LMO4-201ENST00000370542 MRPS5P82675 430 aaKnown RBP17.3■□□□□ 0.36
LMO4-201ENST00000370542 ZNF543Q08ER8 600 aa17.3■□□□□ 0.36
LMO4-201ENST00000370542 SYDE2Q5VT97 1194 aa17.3■□□□□ 0.36
LMO4-201ENST00000370542 CASC1Q6TDU7 716 aa17.3■□□□□ 0.36
LMO4-201ENST00000370542 DGKHQ86XP1 1220 aa17.3■□□□□ 0.36
LMO4-201ENST00000370542 SLC43A3Q8NBI5 491 aa17.3■□□□□ 0.36
LMO4-201ENST00000370542 ANKS1AQ92625 1134 aa17.3■□□□□ 0.36
LMO4-201ENST00000370542 RNF41Q9H4P4 317 aaPredicted RBP17.3■□□□□ 0.36
LMO4-201ENST00000370542 THEGQ9P2T0 379 aa17.3■□□□□ 0.36
LMO4-201ENST00000370542 PNMA2Q9UL42 364 aa17.3■□□□□ 0.36
LMO4-201ENST00000370542 CCPG1Q9ULG6 757 aa17.3■□□□□ 0.36
LMO4-201ENST00000370542 HCN4Q9Y3Q4 1203 aa17.3■□□□□ 0.36
LMO4-201ENST00000370542 DCDC2CA8MYV0 355 aa17.29■□□□□ 0.36
LMO4-201ENST00000370542 ARVCFO00192 962 aa17.29■□□□□ 0.36
LMO4-201ENST00000370542 PQBP1O60828 265 aaKnown RBP17.29■□□□□ 0.36
LMO4-201ENST00000370542 SLC16A2P36021 539 aa17.29■□□□□ 0.36
LMO4-201ENST00000370542 EPHB4P54760 987 aa17.29■□□□□ 0.36
LMO4-201ENST00000370542 TNFAIP2Q03169 654 aa17.29■□□□□ 0.36
LMO4-201ENST00000370542 RRP12Q5JTH9 1297 aaKnown RBP17.29■□□□□ 0.36
LMO4-201ENST00000370542 GNASQ5JWF2 1037 aa17.29■□□□□ 0.36
LMO4-201ENST00000370542 IQSEC1Q6DN90 963 aa17.29■□□□□ 0.36
LMO4-201ENST00000370542 CLEC4DQ8WXI8 215 aa17.29■□□□□ 0.36
LMO4-201ENST00000370542 CHMP4CQ96CF2 233 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms