RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 NEMFO60524 1076 aa11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 ZRANB2O95218 330 aaKnown RBP eCLIP11.22□□□□□ -0.611e-10■■■■□ 21
PRPF38B-203ENST00000370025 SEPT2Q15019 361 aa11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 INF2Q27J81 1249 aa11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 ADGRF4Q8IZF3 695 aa11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 DCAF4Q8WV16 495 aa11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 FAM151AQ8WW52 585 aa11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 MYCBPQ99417 103 aaPredicted RBP11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 PYM1Q9BRP8 204 aaKnown RBP11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 PUF60Q9UHX1 559 aaKnown RBP11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 SLC1A4P43007 532 aa11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 DPCR1Q3MIW9 517 aa11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 SLFN13Q68D06 897 aa11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 CIAPIN1Q6FI81 312 aa11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 CC2D1AQ6P1N0 951 aaPredicted RBP11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 USP49Q70CQ1 688 aa11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 SYMPKQ92797 1274 aaKnown RBP11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 EPSTI1Q96J88 318 aa11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 BPIFA3Q9BQP9 254 aa11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 JMJD4Q9H9V9 463 aa11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 GDF11O95390 407 aa11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 CXCL9Q07325 125 aa11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 DHX8Q14562 1220 aaKnown RBP11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 POSTNQ15063 836 aa11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 KCTD1Q719H9 257 aa11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 REXO1Q8N1G1 1221 aaKnown RBP11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 MRFAP1L1Q96HT8 127 aa11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 VEZTQ9HBM0 779 aa11.22□□□□□ -0.61
PRPF38B-203ENST00000370025 ADCY7P51828 1080 aa11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 ETF1P62495 437 aaKnown RBP11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 KARSQ15046 597 aaKnown RBP11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 SPDYE2Q495Y8 402 aa11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 TTBK2Q6IQ55 1244 aa11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 MICALL1Q8N3F8 863 aa11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 MTMR14Q8NCE2 650 aa11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 DHX58Q96C10 678 aa11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 PCDHA5Q9Y5H7 936 aa11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 EIF3CLB5ME19 914 aaKnown RBP11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 LAD1O00515 517 aa11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 LONP1P36776 959 aaKnown RBP11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 TXLNAP40222 546 aa11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 TNIP1Q15025 636 aa11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 R3HDM1Q15032 1099 aaKnown RBP11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 FKBP1CQ5VVH2 108 aa11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 PPP1R18Q6NYC8 613 aa11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 DHX40Q8IX18 779 aaKnown RBP11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 BANK1Q8NDB2 785 aa11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 GOLGA5Q8TBA6 731 aa11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 COA7Q96BR5 231 aa11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 EIF3CQ99613 913 aaKnown RBP11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 PARD6BQ9BYG5 372 aa11.21□□□□□ -0.61
PRPF38B-203ENST00000370025 COL4A5P29400 1685 aa11.21□□□□□ -0.62
PRPF38B-203ENST00000370025 ACTN2P35609 894 aa11.21□□□□□ -0.62
PRPF38B-203ENST00000370025 SLC16A2P36021 539 aa11.21□□□□□ -0.62
PRPF38B-203ENST00000370025 MDM2Q00987 491 aaPredicted RBP11.21□□□□□ -0.62
PRPF38B-203ENST00000370025 MUM1L1Q5H9M0 696 aa11.21□□□□□ -0.62
PRPF38B-203ENST00000370025 DTHD1Q6ZMT9 781 aa11.21□□□□□ -0.62
PRPF38B-203ENST00000370025 GEMIN8Q9NWZ8 242 aaKnown RBP11.21□□□□□ -0.62
PRPF38B-203ENST00000370025 ZBTB5O15062 677 aa11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 ACTN4O43707 911 aaKnown RBP11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 GH2P01242 217 aa11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 CT47A1Q5JQC4 288 aaPredicted RBP11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 C4orf32Q8N8J7 132 aa11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 L2HGDHQ9H9P8 463 aa11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 BIN2Q9UBW5 565 aaPredicted RBP11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 CD2APQ9Y5K6 639 aa11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 FANCGO15287 622 aa11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 TFRCP02786 760 aaKnown RBP11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 ATP1A3P13637 1013 aa11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 JAKMIP3Q5VZ66 844 aa11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 SARM1Q6SZW1 724 aa11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 NEK8Q86SG6 692 aa11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 BCS1LQ9Y276 419 aa11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 FAN1Q9Y2M0 1017 aa11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 USP17L10C9JJH3 530 aa11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 F5H6K3 240 aa11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 KIF2AO00139 706 aaPredicted RBP11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 FOXN1O15353 648 aa11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 MMP14P50281 582 aa11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 KLRC3Q07444 240 aa11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 SHROOM1Q2M3G4 852 aaPredicted RBP11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 LETM2Q2VYF4 491 aa11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 IQUBQ8NA54 791 aa11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 GDAP1L1Q96MZ0 367 aa11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 IRX2Q9BZI1 471 aaPredicted RBP11.2□□□□□ -0.62
PRPF38B-203ENST00000370025 MRPL12P52815 198 aaKnown RBP11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 GMCL1P1Q8NEA9 526 aa11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 NCAPGQ9BPX3 1015 aa11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 CCNT1O60563 726 aaKnown RBP11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 TADA3O75528 432 aa11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 SERPINC1P01008 464 aa11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 RHOXF2BP0C7M4 288 aa11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 ORC2Q13416 577 aaPredicted RBP11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 DNAJC21Q5F1R6 531 aaKnown RBP11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 FAM83AQ86UY5 434 aa11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 SIAH1Q8IUQ4 282 aa11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 TRIML1Q8N9V2 468 aa11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 TBCKQ8TEA7 893 aa11.19□□□□□ -0.62
PRPF38B-203ENST00000370025 WDR24Q96S15 920 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms