RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 VEGFAP15692 232 aaPredicted RBP11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 TCP1P17987 556 aaKnown RBP11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 POLR2FP61218 127 aaKnown RBP11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 CACNB1Q02641 598 aaPredicted RBP11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 SOGA3Q5TF21 947 aa11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 TRIM68Q6AZZ1 485 aa11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 FAM114A1Q8IWE2 563 aa11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 VIPAS39Q9H9C1 493 aa11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 EPB41L4AQ9HCS5 686 aaPredicted RBP11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.52□□□□□ -0.572e-8■■■■■ 67.3
PRPF38B-201ENST00000370021 TMOD3Q9NYL9 352 aa11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 SNX12Q9UMY4 172 aa11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 LTN1O94822 1766 aa11.52□□□□□ -0.57
PRPF38B-201ENST00000370021 BMP15O95972 392 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 PAX7P23759 505 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 CCDC24Q8N4L8 307 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 ARFGAP2Q8N6H7 521 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 PRPF38AQ8NAV1 312 aaKnown RBP11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 MLXIPLQ9NP71 852 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 DIP2AQ14689 1571 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 TMEM110-MUSTN1A8MSY1 372 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 PPP1R37O75864 691 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 GLI1P08151 1106 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 KRT13P13646 458 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 LIFRP42702 1097 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 MYO1EQ12965 1108 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 RASGRF1Q13972 1273 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 TTMPQ5BVD1 217 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 CDKAL1Q5VV42 579 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 ATP8A1Q9Y2Q0 1164 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 TBX22Q9Y458 520 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 PSMD14O00487 310 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 PALMO75781 387 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 IGHMBP2P38935 993 aaKnown RBP11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 GYG1P46976 350 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 ZBED6P86452 979 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 CCDC13Q8IYE1 715 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 CCDC170Q8IYT3 715 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 TTLL11Q8NHH1 800 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 MDM1Q8TC05 714 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 TBC1D5Q92609 795 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 TSGA10Q9BZW7 698 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 SLIT1O75093 1534 aa11.51□□□□□ -0.57
PRPF38B-201ENST00000370021 LRRC53A6NM62 1247 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 PDE8BO95263 885 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 ELF1P32519 619 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 SLC1A4P43007 532 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 AMPD2Q01433 879 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 DAAM2Q86T65 1068 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 CALML4Q96GE6 196 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 RSRC1Q96IZ7 334 aaKnown RBP11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 ZSCAN10Q96SZ4 725 aaPredicted RBP11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 GPR108Q9NPR9 543 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 LIMA1Q9UHB6 759 aaKnown RBP11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 GOLGA6L10A0A0M3HER8 536 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 GSG1L2A8MUP6 293 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 TNNC1P63316 161 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 ANKRD40Q6AI12 368 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 CABP7Q86V35 215 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 DDX47Q9H0S4 455 aaKnown RBP11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 SLC40A1Q9NP59 571 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 ANKARQ7Z5J8 1434 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 CPDO75976 1380 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 PLEKHG1Q9ULL1 1385 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 CTNND1O60716 968 aaKnown RBP11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 STARD3NLO95772 234 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 NAPAP54920 295 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 UBE3CQ15386 1083 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 HLFQ16534 295 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 KCNV1Q6PIU1 500 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 FAM167BQ9BTA0 163 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 KCNK9Q9NPC2 374 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 MCM9Q9NXL9 1143 aa11.5□□□□□ -0.57
PRPF38B-201ENST00000370021 ARHGAP23Q9P227 1491 aa11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 BICDL2A1A5D9 508 aa11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 ATF3P18847 181 aa11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 MAGOHP61326 146 aaKnown RBP11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 KLHL30Q0D2K2 578 aa11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 STK4Q13043 487 aa11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 RPS6KA1Q15418 735 aa11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 GKAP1Q5VSY0 366 aaPredicted RBP11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 ZNF579Q8NAF0 562 aaKnown RBP11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 MAGOHBQ96A72 148 aaKnown RBP11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 NUP58Q9BVL2 599 aa11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 CAPN11Q9UMQ6 739 aa11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 ENO4A6NNW6 628 aa11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 OPLAHO14841 1288 aa11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 WDR59Q6PJI9 974 aa11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 MAEAQ7L5Y9 396 aa11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 ZCRB1Q8TBF4 217 aaKnown RBP11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 PHRF1Q9P1Y6 1649 aaKnown RBP11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 ABCB4P21439 1286 aa11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 NBPF9Q3BBW0 867 aa11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 SLC9C1Q4G0N8 1177 aa11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 DCAF17Q5H9S7 520 aaPredicted RBP11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 EMBQ6PCB8 327 aa11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 KCNV2Q8TDN2 545 aa11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 P2RX5Q93086 422 aa11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 TSG101Q99816 390 aa11.49□□□□□ -0.57
PRPF38B-201ENST00000370021 KRIT1O00522 736 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms