RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 CWC15Q9P013 229 aaKnown RBP7.88□□□□□ -1.15
CSDE1-204ENST00000369530 GRIN2DO15399 1336 aa7.88□□□□□ -1.15
CSDE1-204ENST00000369530 PATJQ8NI35 1801 aa7.88□□□□□ -1.15
CSDE1-204ENST00000369530 TRIM32Q13049 653 aa7.88□□□□□ -1.15
CSDE1-204ENST00000369530 SEMA3FQ13275 785 aa7.88□□□□□ -1.15
CSDE1-204ENST00000369530 DGKHQ86XP1 1220 aa7.88□□□□□ -1.15
CSDE1-204ENST00000369530 ENAHQ8N8S7 591 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-204ENST00000369530 ZHX2Q9Y6X8 837 aa7.88□□□□□ -1.15
CSDE1-204ENST00000369530 PIK3CDO00329 1044 aa7.88□□□□□ -1.15
CSDE1-204ENST00000369530 HSPA4P34932 840 aa7.88□□□□□ -1.15
CSDE1-204ENST00000369530 ADAM17P78536 824 aa7.88□□□□□ -1.15
CSDE1-204ENST00000369530 GPR142Q7Z601 462 aa7.88□□□□□ -1.15
CSDE1-204ENST00000369530 ERO1AQ96HE7 468 aa7.88□□□□□ -1.15
CSDE1-204ENST00000369530 ESYT1Q9BSJ8 1104 aa7.88□□□□□ -1.15
CSDE1-204ENST00000369530 FUCA2Q9BTY2 467 aa7.88□□□□□ -1.15
CSDE1-204ENST00000369530 CRNKL1Q9BZJ0 848 aaKnown RBP7.88□□□□□ -1.15
CSDE1-204ENST00000369530 ZDHHC9Q9Y397 364 aa7.88□□□□□ -1.15
CSDE1-204ENST00000369530 COL4A3Q01955 1670 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 OBSL1O75147 1896 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 SLC15A5A6NIM6 579 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 NMT2O60551 498 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 PAPLNO95428 1278 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 SLC34A2O95436 690 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 NDUFB10O96000 172 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 LINC00271P0C7V0 271 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 PRKCZQ05513 592 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 ZSCAN25Q6NSZ9 544 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 CCDC62Q6P9F0 684 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 MOV10L1Q9BXT6 1211 aaKnown RBP7.87□□□□□ -1.15
CSDE1-204ENST00000369530 VEZTQ9HBM0 779 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 ANO2Q9NQ90 1003 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 CD4P01730 458 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 CALRP27797 417 aaKnown RBP7.87□□□□□ -1.15
CSDE1-204ENST00000369530 ABCB5Q2M3G0 1257 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 CERKLQ49MI3 558 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-204ENST00000369530 PARK7Q99497 189 aaKnown RBP7.87□□□□□ -1.15
CSDE1-204ENST00000369530 CLEC11AQ9Y240 323 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 SYCE3A1L190 88 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 SOWAHBA6NEL2 793 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 KDM4AO75164 1064 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 TRPA1O75762 1119 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 IFIT2P09913 472 aaKnown RBP7.87□□□□□ -1.15
CSDE1-204ENST00000369530 PLA2G4AP47712 749 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 MAP9Q49MG5 647 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 TTC6Q86TZ1 520 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 PACS2Q86VP3 889 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 MB21D1Q8N884 522 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 SYAP1Q96A49 352 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-204ENST00000369530 MBOAT7Q96N66 472 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 PYCARDQ9ULZ3 195 aa7.87□□□□□ -1.15
CSDE1-204ENST00000369530 WDFY3Q8IZQ1 3526 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 USP17L15C9J2P7 530 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 USP17L13C9JLJ4 530 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 USP17L11C9JVI0 530 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 USP17L18D6R9N7 530 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 USP17L22D6RA61 530 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 USP17L17D6RBQ6 530 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 USP17L19D6RCP7 530 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 USP17L20D6RJB6 530 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 GDF11O95390 407 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 USP17L24Q0WX57 530 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 MCTP1Q6DN14 999 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 DCAF4Q8WV16 495 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 KANSL2Q9H9L4 492 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 ZSWIM5Q9P217 1185 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 COL20A1Q9P218 1284 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 LRP2BPQ9P2M1 347 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 TSKSQ9UJT2 592 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 HMGCS2P54868 508 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 SESTD1Q86VW0 696 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 ZNF543Q08ER8 600 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 TTC31Q49AM3 519 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-204ENST00000369530 FBXO38Q6PIJ6 1188 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 RASEFQ8IZ41 740 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 TNFRSF25Q93038 417 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 MAML3Q96JK9 1138 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 TMEM47Q9BQJ4 181 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 TTC12Q9H892 705 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-204ENST00000369530 ZFYVE28Q9HCC9 887 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 ABCF2Q9UG63 623 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 SAP30BPQ9UHR5 308 aaKnown RBP7.86□□□□□ -1.15
CSDE1-204ENST00000369530 LCMT1Q9UIC8 334 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 RRP15Q9Y3B9 282 aaKnown RBP7.86□□□□□ -1.15
CSDE1-204ENST00000369530 SLC4A4Q9Y6R1 1079 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 ELP1O95163 1332 aa7.86□□□□□ -1.15
CSDE1-204ENST00000369530 ADCY5O95622 1261 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 SSR1P43307 286 aaKnown RBP7.85□□□□□ -1.15
CSDE1-204ENST00000369530 TDO2P48775 406 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 SPP2Q13103 211 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 AKNAD1Q5T1N1 836 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 SAMD3Q8N6K7 520 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 EXOC4Q96A65 974 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 ERICH4A6NGS2 130 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 ERC2O15083 957 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 MAFGO15525 162 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 USP14P54578 494 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 TPM4P67936 248 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 CACNB2Q08289 660 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-204ENST00000369530 GRM4Q14833 912 aa7.85□□□□□ -1.15
CSDE1-204ENST00000369530 PKN1Q16512 942 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms