RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 ARL6IP4Q66PJ3 421 aaKnown RBP16.02■□□□□ 0.15
HMGCS2-201ENST00000369406 USP50Q70EL3 339 aaPredicted RBP16.02■□□□□ 0.15
HMGCS2-201ENST00000369406 FAM160B2Q86V87 743 aa16.02■□□□□ 0.15
HMGCS2-201ENST00000369406 LDHDQ86WU2 507 aa16.02■□□□□ 0.15
HMGCS2-201ENST00000369406 LPAR1Q92633 364 aa16.02■□□□□ 0.15
HMGCS2-201ENST00000369406 MTMR9Q96QG7 549 aa16.02■□□□□ 0.15
HMGCS2-201ENST00000369406 SLF1Q9BQI6 1058 aa16.02■□□□□ 0.15
HMGCS2-201ENST00000369406 FAM13BQ9NYF5 915 aa16.02■□□□□ 0.15
HMGCS2-201ENST00000369406 KIAA1468Q9P260 1216 aa16.02■□□□□ 0.15
HMGCS2-201ENST00000369406 AFG3L2Q9Y4W6 797 aa16.02■□□□□ 0.15
HMGCS2-201ENST00000369406 CTAGE5O15320 804 aa16.01■□□□□ 0.15
HMGCS2-201ENST00000369406 AP5Z1O43299 807 aa16.01■□□□□ 0.15
HMGCS2-201ENST00000369406 E2F4Q16254 413 aa16.01■□□□□ 0.15
HMGCS2-201ENST00000369406 DHX58Q96C10 678 aa16.01■□□□□ 0.15
HMGCS2-201ENST00000369406 HOOK2Q96ED9 719 aa16.01■□□□□ 0.15
HMGCS2-201ENST00000369406 LCTP09848 1927 aa16.01■□□□□ 0.15
HMGCS2-201ENST00000369406 OR52Z1P0C646 297 aa16■□□□□ 0.15
HMGCS2-201ENST00000369406 ISM2Q6H9L7 571 aa16■□□□□ 0.15
HMGCS2-201ENST00000369406 FLOT1O75955 427 aa16■□□□□ 0.15
HMGCS2-201ENST00000369406 CNNM3Q8NE01 707 aa16■□□□□ 0.15
HMGCS2-201ENST00000369406 HAS1Q92839 578 aa16■□□□□ 0.15
HMGCS2-201ENST00000369406 MTRQ99707 1265 aa16■□□□□ 0.15
HMGCS2-201ENST00000369406 CBX8Q9HC52 389 aa16■□□□□ 0.15
HMGCS2-201ENST00000369406 PPP1R9AQ9ULJ8 1098 aa16■□□□□ 0.15
HMGCS2-201ENST00000369406 GRIN3BO60391 1043 aa15.99■□□□□ 0.15
HMGCS2-201ENST00000369406 KARSQ15046 597 aaKnown RBP15.99■□□□□ 0.15
HMGCS2-201ENST00000369406 DPCR1Q3MIW9 517 aa15.99■□□□□ 0.15
HMGCS2-201ENST00000369406 SASS6Q6UVJ0 657 aa15.99■□□□□ 0.15
HMGCS2-201ENST00000369406 DTHD1Q6ZMT9 781 aa15.99■□□□□ 0.15
HMGCS2-201ENST00000369406 LUZP1Q86V48 1076 aa15.99■□□□□ 0.15
HMGCS2-201ENST00000369406 ATG4CQ96DT6 458 aa15.99■□□□□ 0.15
HMGCS2-201ENST00000369406 RAVER2Q9HCJ3 691 aaKnown RBP15.99■□□□□ 0.15
HMGCS2-201ENST00000369406 MAP3K9P80192 1104 aa15.99■□□□□ 0.15
HMGCS2-201ENST00000369406 POTEEQ6S8J3 1075 aa15.99■□□□□ 0.15
HMGCS2-201ENST00000369406 PRPF38AQ8NAV1 312 aaKnown RBP15.99■□□□□ 0.15
HMGCS2-201ENST00000369406 CLEC4DQ8WXI8 215 aa15.99■□□□□ 0.15
HMGCS2-201ENST00000369406 STAMQ92783 540 aa15.99■□□□□ 0.15
HMGCS2-201ENST00000369406 SLC38A10Q9HBR0 1119 aa15.99■□□□□ 0.15
HMGCS2-201ENST00000369406 ZC3H4Q9UPT8 1303 aaKnown RBP15.99■□□□□ 0.15
HMGCS2-201ENST00000369406 NFIBO00712 420 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 PEX10O60683 326 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 CFBP00751 764 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 ICAM1P05362 532 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 BMP6P22004 513 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 LONP1P36776 959 aaKnown RBP15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 PRPHP41219 470 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 TECP42680 631 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 NAALADL2Q58DX5 795 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 MUM1L1Q5H9M0 696 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 PDXDC2PQ6P474 469 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 FCHSD1Q86WN1 690 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 CPXCR1Q8N123 301 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 CYP2W1Q8TAV3 490 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 C12orf42Q96LP6 360 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 PLIN2Q99541 437 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 MMTAG2Q9BU76 263 aaKnown RBP15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 COL20A1Q9P218 1284 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 TUBE1Q9UJT0 475 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 PIK3CDO00329 1044 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 TRAF5O00463 557 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 TXKP42681 527 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 UBXN2AP68543 259 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 ARHGAP4P98171 946 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 TREML2Q5T2D2 321 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 SH3RF1Q7Z6J0 888 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 LENG9Q96B70 501 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 ZFP91Q96JP5 570 aaPredicted RBP15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 ELP3Q9H9T3 547 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 AS3MTQ9HBK9 375 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 DDX25Q9UHL0 483 aaKnown RBP15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 CCPG1Q9ULG6 757 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 PCDHA5Q9Y5H7 936 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 A0A0G2JMZ2 1700 aa15.98■□□□□ 0.15
HMGCS2-201ENST00000369406 FAM86B1E9PN63 330 aa15.97■□□□□ 0.15
HMGCS2-201ENST00000369406 FAM86B2P0C5J1 330 aa15.97■□□□□ 0.15
HMGCS2-201ENST00000369406 USP14P54578 494 aa15.97■□□□□ 0.15
HMGCS2-201ENST00000369406 CALCRLQ16602 461 aa15.97■□□□□ 0.15
HMGCS2-201ENST00000369406 PPP4R3AQ6IN85 833 aa15.97■□□□□ 0.15
HMGCS2-201ENST00000369406 REPS2Q8NFH8 660 aa15.97■□□□□ 0.15
HMGCS2-201ENST00000369406 HOMER2Q9NSB8 354 aa15.97■□□□□ 0.15
HMGCS2-201ENST00000369406 RIPK3Q9Y572 518 aa15.97■□□□□ 0.15
HMGCS2-201ENST00000369406 POTEMA6NI47 508 aa15.97■□□□□ 0.15
HMGCS2-201ENST00000369406 AFMP43652 599 aa15.97■□□□□ 0.15
HMGCS2-201ENST00000369406 AP3B2Q13367 1082 aa15.97■□□□□ 0.15
HMGCS2-201ENST00000369406 STX1AQ16623 288 aa15.97■□□□□ 0.15
HMGCS2-201ENST00000369406 FAM200AQ8TCP9 573 aa15.97■□□□□ 0.15
HMGCS2-201ENST00000369406 ZC3H15Q8WU90 426 aaKnown RBP15.97■□□□□ 0.15
HMGCS2-201ENST00000369406 PAGE5Q96GU1 130 aa15.97■□□□□ 0.15
HMGCS2-201ENST00000369406 MBOAT7Q96N66 472 aa15.97■□□□□ 0.15
HMGCS2-201ENST00000369406 NUDT12Q9BQG2 462 aa15.97■□□□□ 0.15
HMGCS2-201ENST00000369406 LAD1O00515 517 aa15.96■□□□□ 0.15
HMGCS2-201ENST00000369406 VWA5AO00534 786 aa15.96■□□□□ 0.15
HMGCS2-201ENST00000369406 SREBF1P36956 1147 aa15.96■□□□□ 0.15
HMGCS2-201ENST00000369406 IQCB1Q15051 598 aa15.96■□□□□ 0.15
HMGCS2-201ENST00000369406 POSTNQ15063 836 aa15.96■□□□□ 0.15
HMGCS2-201ENST00000369406 MAP1SQ66K74 1059 aaPredicted RBP15.96■□□□□ 0.15
HMGCS2-201ENST00000369406 SLC30A10Q6XR72 485 aa15.96■□□□□ 0.15
HMGCS2-201ENST00000369406 IGSF22Q8N9C0 903 aa15.96■□□□□ 0.15
HMGCS2-201ENST00000369406 SLFN14P0C7P3 912 aa15.96■□□□□ 0.15
HMGCS2-201ENST00000369406 GLT8D2Q9H1C3 349 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms