RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 SGSM2O43147 1006 aa9.23□□□□□ -0.93
SSR2-202ENST00000368311 PRPF40AO75400 957 aaKnown RBP9.23□□□□□ -0.93
SSR2-202ENST00000368311 PREPLQ4J6C6 727 aaPredicted RBP9.23□□□□□ -0.93
SSR2-202ENST00000368311 TTC38Q5R3I4 469 aa9.23□□□□□ -0.93
SSR2-202ENST00000368311 TCERG1LQ5VWI1 586 aa9.23□□□□□ -0.93
SSR2-202ENST00000368311 FANCBQ8NB91 859 aa9.23□□□□□ -0.93
SSR2-202ENST00000368311 ERCC4Q92889 916 aaPredicted RBP9.23□□□□□ -0.93
SSR2-202ENST00000368311 RTFDC1Q9BY42 306 aaPredicted RBP9.23□□□□□ -0.93
SSR2-202ENST00000368311 UPF3BQ9BZI7 483 aaKnown RBP9.23□□□□□ -0.93
SSR2-202ENST00000368311 TRIM5Q9C035 493 aa9.23□□□□□ -0.93
SSR2-202ENST00000368311 COL16A1Q07092 1604 aaPredicted RBP9.23□□□□□ -0.93
SSR2-202ENST00000368311 AKR1A1P14550 325 aa9.23□□□□□ -0.93
SSR2-202ENST00000368311 LIG4P49917 911 aa9.23□□□□□ -0.93
SSR2-202ENST00000368311 HMGCS2P54868 508 aa9.23□□□□□ -0.93
SSR2-202ENST00000368311 FOXO4P98177 505 aa9.23□□□□□ -0.93
SSR2-202ENST00000368311 PTPAQ15257 358 aa9.23□□□□□ -0.93
SSR2-202ENST00000368311 CDC42EP5Q6NZY7 148 aa9.23□□□□□ -0.93
SSR2-202ENST00000368311 MTMR14Q8NCE2 650 aa9.23□□□□□ -0.93
SSR2-202ENST00000368311 PUS3Q9BZE2 481 aaKnown RBP9.23□□□□□ -0.93
SSR2-202ENST00000368311 VTA1Q9NP79 307 aa9.23□□□□□ -0.93
SSR2-202ENST00000368311 UBN1Q9NPG3 1134 aa9.23□□□□□ -0.93
SSR2-202ENST00000368311 DDX25Q9UHL0 483 aaKnown RBP9.23□□□□□ -0.93
SSR2-202ENST00000368311 SLC12A6Q9UHW9 1150 aa9.23□□□□□ -0.93
SSR2-202ENST00000368311 NUB1Q9Y5A7 615 aa9.23□□□□□ -0.93
SSR2-202ENST00000368311 COL4A3BPQ9Y5P4 624 aa9.23□□□□□ -0.93
SSR2-202ENST00000368311 V9GY48 417 aaPredicted RBP9.23□□□□□ -0.93
SSR2-202ENST00000368311 UBE2Q2LH0YL09 131 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 USO1O60763 962 aaKnown RBP9.22□□□□□ -0.93
SSR2-202ENST00000368311 MTMR2Q13614 643 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 ARMCX5Q6P1M9 558 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 PLEKHM2Q8IWE5 1019 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 NLRP7Q8WX94 980 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 PPP1R9BQ96SB3 815 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 SYNGAP1Q96PV0 1343 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 NFAT5O94916 1531 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 WDR64B1ANS9 1081 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 YEATS4O95619 227 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 GJB2P29033 226 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 CIITAP33076 1130 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 LRCH2Q5VUJ6 765 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 RIOK1Q9BRS2 568 aaKnown RBP9.22□□□□□ -0.93
SSR2-202ENST00000368311 TMEM206Q9H813 350 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 KIAA1586Q9HCI6 787 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 LIFRP42702 1097 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 SLC26A2P50443 739 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 PDE6CP51160 858 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 BIRC2Q13490 618 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 C1orf228Q6PIY5 440 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 ANKRD36BP1Q96IX9 119 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 AGTPBP1Q9UPW5 1226 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 MYL1P05976 194 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 IGKV5-2P06315 115 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 CAP2P40123 477 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 BACE1P56817 501 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 PPP2R3AQ06190 1150 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 MYO1EQ12965 1108 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 FAM83BQ5T0W9 1011 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 LMBR1Q8WVP7 490 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 LCMT1Q9UIC8 334 aa9.22□□□□□ -0.93
SSR2-202ENST00000368311 PDHXO00330 501 aa9.21□□□□□ -0.93
SSR2-202ENST00000368311 FIBPO43427 364 aa9.21□□□□□ -0.93
SSR2-202ENST00000368311 PLD1Q13393 1074 aa9.21□□□□□ -0.93
SSR2-202ENST00000368311 FAM47AQ5JRC9 791 aa9.21□□□□□ -0.93
SSR2-202ENST00000368311 PDXDC2PQ6P474 469 aa9.21□□□□□ -0.93
SSR2-202ENST00000368311 PDILTQ8N807 584 aa9.21□□□□□ -0.93
SSR2-202ENST00000368311 DNERQ8NFT8 737 aa9.21□□□□□ -0.93
SSR2-202ENST00000368311 WNK4Q96J92 1243 aa9.21□□□□□ -0.93
SSR2-202ENST00000368311 APBA2Q99767 749 aa9.21□□□□□ -0.93
SSR2-202ENST00000368311 OSBPL3Q9H4L5 887 aa9.21□□□□□ -0.93
SSR2-202ENST00000368311 PCDHA4Q9UN74 947 aa9.21□□□□□ -0.93
SSR2-202ENST00000368311 MYO5BQ9ULV0 1848 aa9.21□□□□□ -0.93
SSR2-202ENST00000368311 ZMYM2Q9UBW7 1377 aa9.21□□□□□ -0.93
SSR2-202ENST00000368311 E7EWF7 191 aa9.21□□□□□ -0.93
SSR2-202ENST00000368311 LIN9Q5TKA1 542 aa9.21□□□□□ -0.93
SSR2-202ENST00000368311 HAUS6Q7Z4H7 955 aa9.21□□□□□ -0.93
SSR2-202ENST00000368311 NCAPGQ9BPX3 1015 aa9.21□□□□□ -0.93
SSR2-202ENST00000368311 DDX50Q9BQ39 737 aaKnown RBP9.21□□□□□ -0.93
SSR2-202ENST00000368311 EVI5O60447 810 aa9.21□□□□□ -0.94
SSR2-202ENST00000368311 SNX29Q8TEQ0 813 aa9.21□□□□□ -0.94
SSR2-202ENST00000368311 EAF2Q96CJ1 260 aaPredicted RBP9.21□□□□□ -0.94
SSR2-202ENST00000368311 FAM20AQ96MK3 541 aa9.21□□□□□ -0.94
SSR2-202ENST00000368311 TSPY26PQ9H489 355 aa9.21□□□□□ -0.94
SSR2-202ENST00000368311 FLT1P17948 1338 aa9.21□□□□□ -0.94
SSR2-202ENST00000368311 CHMP2AO43633 222 aa9.21□□□□□ -0.94
SSR2-202ENST00000368311 DDR1Q08345 913 aa9.21□□□□□ -0.94
SSR2-202ENST00000368311 PPP2R5DQ14738 602 aa9.21□□□□□ -0.94
SSR2-202ENST00000368311 VEPH1Q14D04 833 aa9.21□□□□□ -0.94
SSR2-202ENST00000368311 CLUL1Q15846 466 aa9.21□□□□□ -0.94
SSR2-202ENST00000368311 MAP1SQ66K74 1059 aaPredicted RBP9.21□□□□□ -0.94
SSR2-202ENST00000368311 ENGASEQ8NFI3 743 aa9.21□□□□□ -0.94
SSR2-202ENST00000368311 KLHDC4Q8TBB5 520 aa9.21□□□□□ -0.94
SSR2-202ENST00000368311 IPO4Q8TEX9 1081 aaKnown RBP9.21□□□□□ -0.94
SSR2-202ENST00000368311 MTG1Q9BT17 334 aaPredicted RBP9.21□□□□□ -0.94
SSR2-202ENST00000368311 PIDD1Q9HB75 910 aa9.21□□□□□ -0.94
SSR2-202ENST00000368311 HMGCRP04035 888 aa9.2□□□□□ -0.94
SSR2-202ENST00000368311 VIMP08670 466 aaKnown RBP9.2□□□□□ -0.94
SSR2-202ENST00000368311 RFC5P40937 340 aa9.2□□□□□ -0.94
SSR2-202ENST00000368311 DIXDC1Q155Q3 683 aa9.2□□□□□ -0.94
SSR2-202ENST00000368311 PDZD4Q76G19 769 aaPredicted RBP9.2□□□□□ -0.94
SSR2-202ENST00000368311 SAMD7Q7Z3H4 446 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms