RNA–Protein interactions for RNA: ENST00000368300.8

LMNA-206, Transcript of lamin A/C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNA, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-206ENST00000368300 SCAF8Q9UPN6 1271 aaKnown RBP13.83□□□□□ -0.19
LMNA-206ENST00000368300 ERICH4A6NGS2 130 aa13.83□□□□□ -0.2
LMNA-206ENST00000368300 SOWAHDA6NJG2 315 aa13.83□□□□□ -0.2
LMNA-206ENST00000368300 KCNJ18B7U540 433 aa13.83□□□□□ -0.2
LMNA-206ENST00000368300 RNF225M0QZC1 329 aaPredicted RBP13.83□□□□□ -0.2
LMNA-206ENST00000368300 GH2P01242 217 aa13.83□□□□□ -0.2
LMNA-206ENST00000368300 IRX3P78415 501 aaPredicted RBP13.83□□□□□ -0.2
LMNA-206ENST00000368300 ICA1Q05084 483 aa13.83□□□□□ -0.2
LMNA-206ENST00000368300 STK4Q13043 487 aa13.83□□□□□ -0.2
LMNA-206ENST00000368300 KCNJ12Q14500 433 aa13.83□□□□□ -0.2
LMNA-206ENST00000368300 GPATCH4Q5T3I0 446 aaKnown RBP13.83□□□□□ -0.2
LMNA-206ENST00000368300 DYMQ7RTS9 669 aa13.83□□□□□ -0.2
LMNA-206ENST00000368300 TRIM9Q9C026 710 aa13.83□□□□□ -0.2
LMNA-206ENST00000368300 DHX36Q9H2U1 1008 aaKnown RBP13.83□□□□□ -0.2
LMNA-206ENST00000368300 RIC8AQ9NPQ8 531 aa13.83□□□□□ -0.2
LMNA-206ENST00000368300 STK32BQ9NY57 414 aa13.83□□□□□ -0.2
LMNA-206ENST00000368300 DNAI1Q9UI46 699 aa13.83□□□□□ -0.2
LMNA-206ENST00000368300 ZNF215Q9UL58 517 aaPredicted RBP13.83□□□□□ -0.2
LMNA-206ENST00000368300 CASP14P31944 242 aa13.83□□□□□ -0.2
LMNA-206ENST00000368300 PDE4DQ08499 809 aa13.83□□□□□ -0.2
LMNA-206ENST00000368300 MCM6Q14566 821 aa13.83□□□□□ -0.2
LMNA-206ENST00000368300 FILIP1LQ4L180 1135 aa13.83□□□□□ -0.2
LMNA-206ENST00000368300 IRF2BP1Q8IU81 584 aa13.83□□□□□ -0.2
LMNA-206ENST00000368300 REXO1L1PQ8IX06 675 aa13.83□□□□□ -0.2
LMNA-206ENST00000368300 IDI2Q9BXS1 227 aa13.83□□□□□ -0.2
LMNA-206ENST00000368300 EHD4Q9H223 541 aa13.83□□□□□ -0.2
LMNA-206ENST00000368300 ZNF277Q9NRM2 450 aaPredicted RBP13.83□□□□□ -0.2
LMNA-206ENST00000368300 PCDHA1Q9Y5I3 950 aa13.83□□□□□ -0.2
LMNA-206ENST00000368300 A0A0U1RQJ8 604 aa13.82□□□□□ -0.2
LMNA-206ENST00000368300 AKR1B15C9JRZ8 316 aaPredicted RBP13.82□□□□□ -0.2
LMNA-206ENST00000368300 F5H6K3 240 aa13.82□□□□□ -0.2
LMNA-206ENST00000368300 MARCH6O60337 910 aa13.82□□□□□ -0.2
LMNA-206ENST00000368300 FXR1P51114 621 aaKnown RBP eCLIP13.82□□□□□ -0.25e-7■■■■□ 19.8
LMNA-206ENST00000368300 KLRC3Q07444 240 aa13.82□□□□□ -0.2
LMNA-206ENST00000368300 GRB10Q13322 594 aa13.82□□□□□ -0.2
LMNA-206ENST00000368300 USH1GQ495M9 461 aa13.82□□□□□ -0.2
LMNA-206ENST00000368300 TCP11X2Q5H9J9 407 aa13.82□□□□□ -0.2
LMNA-206ENST00000368300 SAMD1Q6SPF0 538 aaPredicted RBP13.82□□□□□ -0.2
LMNA-206ENST00000368300 DEFB132Q7Z7B7 95 aa13.82□□□□□ -0.2
LMNA-206ENST00000368300 PPFIBP1Q86W92 1011 aa13.82□□□□□ -0.2
LMNA-206ENST00000368300 ATRIPQ8WXE1 791 aa13.82□□□□□ -0.2
LMNA-206ENST00000368300 CUL5Q93034 780 aa13.82□□□□□ -0.2
LMNA-206ENST00000368300 AK8Q96MA6 479 aa13.82□□□□□ -0.2
LMNA-206ENST00000368300 SRRTQ9BXP5 876 aaKnown RBP13.82□□□□□ -0.2
LMNA-206ENST00000368300 KANSL2Q9H9L4 492 aa13.82□□□□□ -0.2
LMNA-206ENST00000368300 KCND1Q9NSA2 647 aa13.82□□□□□ -0.2
LMNA-206ENST00000368300 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.82□□□□□ -0.2
LMNA-206ENST00000368300 RGS17Q9UGC6 210 aaPredicted RBP13.82□□□□□ -0.2
LMNA-206ENST00000368300 PPP2R2CQ9Y2T4 447 aa13.82□□□□□ -0.2
LMNA-206ENST00000368300 NRXN2Q9P2S2 1712 aa13.82□□□□□ -0.2
LMNA-206ENST00000368300 FANCGO15287 622 aa13.82□□□□□ -0.2
LMNA-206ENST00000368300 CTIFO43310 598 aaKnown RBP13.82□□□□□ -0.2
LMNA-206ENST00000368300 COPB1P53618 953 aaKnown RBP13.82□□□□□ -0.2
LMNA-206ENST00000368300 ABCB5Q2M3G0 1257 aa13.82□□□□□ -0.2
LMNA-206ENST00000368300 CT47A1Q5JQC4 288 aaPredicted RBP13.82□□□□□ -0.2
LMNA-206ENST00000368300 CAMKK2Q96RR4 588 aa13.82□□□□□ -0.2
LMNA-206ENST00000368300 CSRNP1Q96S65 589 aa13.82□□□□□ -0.2
LMNA-206ENST00000368300 GTPBP4Q9BZE4 634 aaKnown RBP13.82□□□□□ -0.2
LMNA-206ENST00000368300 SERPINA10Q9UK55 444 aa13.82□□□□□ -0.2
LMNA-206ENST00000368300 ARHGAP6O43182 974 aa13.81□□□□□ -0.2
LMNA-206ENST00000368300 PBX1P40424 430 aa13.81□□□□□ -0.2
LMNA-206ENST00000368300 CDC37Q16543 378 aaPredicted RBP13.81□□□□□ -0.2
LMNA-206ENST00000368300 KCNK18Q7Z418 384 aa13.81□□□□□ -0.2
LMNA-206ENST00000368300 CDAN1Q8IWY9 1227 aa13.81□□□□□ -0.2
LMNA-206ENST00000368300 LRRN4CLQ8ND94 238 aa13.81□□□□□ -0.2
LMNA-206ENST00000368300 CALML4Q96GE6 196 aa13.81□□□□□ -0.2
LMNA-206ENST00000368300 TRIM47Q96LD4 638 aa13.81□□□□□ -0.2
LMNA-206ENST00000368300 DDX25Q9UHL0 483 aaKnown RBP13.81□□□□□ -0.2
LMNA-206ENST00000368300 NKRFO15226 690 aaKnown RBP eCLIP13.81□□□□□ -0.23e-7■□□□□ 10.1
LMNA-206ENST00000368300 MRPL12P52815 198 aaKnown RBP13.81□□□□□ -0.2
LMNA-206ENST00000368300 NCBP1Q09161 790 aaKnown RBP13.81□□□□□ -0.2
LMNA-206ENST00000368300 ECM1Q16610 540 aa13.81□□□□□ -0.2
LMNA-206ENST00000368300 PNMA5Q96PV4 448 aa13.81□□□□□ -0.2
LMNA-206ENST00000368300 SLC39A2Q9NP94 309 aa13.81□□□□□ -0.2
LMNA-206ENST00000368300 BLOC1S4Q9NUP1 217 aa13.81□□□□□ -0.2
LMNA-206ENST00000368300 MYO3BQ8WXR4 1341 aa13.81□□□□□ -0.2
LMNA-206ENST00000368300 RHOBTB3O94955 611 aa13.81□□□□□ -0.2
LMNA-206ENST00000368300 GYPCP04921 128 aa13.81□□□□□ -0.2
LMNA-206ENST00000368300 SNX29Q8TEQ0 813 aa13.81□□□□□ -0.2
LMNA-206ENST00000368300 CDK5RAP3Q96JB5 506 aa13.81□□□□□ -0.2
LMNA-206ENST00000368300 CTAGE1Q96RT6 745 aa13.81□□□□□ -0.2
LMNA-206ENST00000368300 EXOC1Q9NV70 894 aa13.81□□□□□ -0.2
LMNA-206ENST00000368300 A0A1W2PRG0 241 aa13.8□□□□□ -0.2
LMNA-206ENST00000368300 MYMKA6NI61 221 aa13.8□□□□□ -0.2
LMNA-206ENST00000368300 hCG_1984214I3L0E3 225 aa13.8□□□□□ -0.2
LMNA-206ENST00000368300 NDUFB10O96000 172 aa13.8□□□□□ -0.2
LMNA-206ENST00000368300 ERCC3P19447 782 aa13.8□□□□□ -0.2
LMNA-206ENST00000368300 UBXN1Q04323 297 aa13.8□□□□□ -0.2
LMNA-206ENST00000368300 TRIM65Q6PJ69 517 aa13.8□□□□□ -0.2
LMNA-206ENST00000368300 ZNF713Q8N859 430 aaPredicted RBP13.8□□□□□ -0.2
LMNA-206ENST00000368300 GIMAP8Q8ND71 665 aaPredicted RBP13.8□□□□□ -0.2
LMNA-206ENST00000368300 HAS1Q92839 578 aa13.8□□□□□ -0.2
LMNA-206ENST00000368300 P2RX7Q99572 595 aaKnown RBP13.8□□□□□ -0.2
LMNA-206ENST00000368300 MRIQ9BWK5 157 aa13.8□□□□□ -0.2
LMNA-206ENST00000368300 IRX2Q9BZI1 471 aaPredicted RBP13.8□□□□□ -0.2
LMNA-206ENST00000368300 LIMA1Q9UHB6 759 aaKnown RBP13.8□□□□□ -0.2
LMNA-206ENST00000368300 STX10O60499 249 aa13.8□□□□□ -0.2
LMNA-206ENST00000368300 IDEP14735 1019 aa13.8□□□□□ -0.2
LMNA-206ENST00000368300 ECE1P42892 770 aa13.8□□□□□ -0.2
LMNA-206ENST00000368300 CLK2P49760 499 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms