RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 BCAS3Q9H6U6 928 aa5.69□□□□□ -1.5
ECHDC1-201ENST00000368287 METTL5Q9NRN9 209 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-201ENST00000368287 HDLBPQ00341 1268 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-201ENST00000368287 FAM160A1Q05DH4 1040 aa5.68□□□□□ -1.5
ECHDC1-201ENST00000368287 FAM124AQ86V42 546 aa5.68□□□□□ -1.5
ECHDC1-201ENST00000368287 GOLM1Q8NBJ4 401 aa5.68□□□□□ -1.5
ECHDC1-201ENST00000368287 FBXO27Q8NI29 283 aa5.68□□□□□ -1.5
ECHDC1-201ENST00000368287 RNF34Q969K3 372 aa5.68□□□□□ -1.5
ECHDC1-201ENST00000368287 TMEM74Q96NL1 305 aa5.68□□□□□ -1.5
ECHDC1-201ENST00000368287 CDK5RAP1Q96SZ6 601 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-201ENST00000368287 MINDY4BA8MYZ0 360 aa5.67□□□□□ -1.5
ECHDC1-201ENST00000368287 AMHP03971 560 aa5.67□□□□□ -1.5
ECHDC1-201ENST00000368287 CORO7P57737 925 aa5.67□□□□□ -1.5
ECHDC1-201ENST00000368287 FANCCQ00597 558 aa5.67□□□□□ -1.5
ECHDC1-201ENST00000368287 SMAD4Q13485 552 aaKnown RBP5.67□□□□□ -1.5
ECHDC1-201ENST00000368287 CDCP2Q5VXM1 449 aa5.67□□□□□ -1.5
ECHDC1-201ENST00000368287 CWF19L1Q69YN2 538 aaKnown RBP5.67□□□□□ -1.5
ECHDC1-201ENST00000368287 METTL16Q86W50 562 aaKnown RBP5.67□□□□□ -1.5
ECHDC1-201ENST00000368287 SLC12A9Q9BXP2 914 aa5.67□□□□□ -1.5
ECHDC1-201ENST00000368287 PRR13Q9NZ81 148 aa5.67□□□□□ -1.5
ECHDC1-201ENST00000368287 PCDHB14Q9Y5E9 798 aa5.67□□□□□ -1.5
ECHDC1-201ENST00000368287 HS3ST3A1Q9Y663 406 aa5.67□□□□□ -1.5
ECHDC1-201ENST00000368287 TLR3O15455 904 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-201ENST00000368287 CCNFP41002 786 aa5.66□□□□□ -1.5
ECHDC1-201ENST00000368287 KLF10Q13118 480 aa5.66□□□□□ -1.5
ECHDC1-201ENST00000368287 CWF19L2Q2TBE0 894 aaKnown RBP5.66□□□□□ -1.5
ECHDC1-201ENST00000368287 ERMP1Q7Z2K6 904 aa5.66□□□□□ -1.5
ECHDC1-201ENST00000368287 CPA5Q8WXQ8 436 aa5.66□□□□□ -1.5
ECHDC1-201ENST00000368287 TSPAN17Q96FV3 270 aa5.66□□□□□ -1.5
ECHDC1-201ENST00000368287 KLC2Q9H0B6 622 aa5.66□□□□□ -1.5
ECHDC1-201ENST00000368287 CNNM2Q9H8M5 875 aa5.66□□□□□ -1.5
ECHDC1-201ENST00000368287 RXFP1Q9HBX9 757 aa5.66□□□□□ -1.5
ECHDC1-201ENST00000368287 KBTBD4Q9NVX7 518 aa5.66□□□□□ -1.5
ECHDC1-201ENST00000368287 MROH6A6NGR9 719 aa5.65□□□□□ -1.5
ECHDC1-201ENST00000368287 CACNB2Q08289 660 aaPredicted RBP5.65□□□□□ -1.5
ECHDC1-201ENST00000368287 AUHQ13825 339 aaKnown RBP5.65□□□□□ -1.5
ECHDC1-201ENST00000368287 CABP7Q86V35 215 aa5.65□□□□□ -1.5
ECHDC1-201ENST00000368287 FGF10O15520 208 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-201ENST00000368287 GLI4P10075 376 aa5.64□□□□□ -1.51
ECHDC1-201ENST00000368287 FAM26FQ5R3K3 315 aa5.64□□□□□ -1.51
ECHDC1-201ENST00000368287 FAM196AQ6ZSG2 479 aa5.64□□□□□ -1.51
ECHDC1-201ENST00000368287 NLRC3Q7RTR2 1065 aa5.64□□□□□ -1.51
ECHDC1-201ENST00000368287 TMEM192Q8IY95 271 aa5.64□□□□□ -1.51
ECHDC1-201ENST00000368287 ATG4CQ96DT6 458 aa5.64□□□□□ -1.51
ECHDC1-201ENST00000368287 DDX11Q96FC9 970 aa5.64□□□□□ -1.51
ECHDC1-201ENST00000368287 SLC6A18Q96N87 628 aa5.64□□□□□ -1.51
ECHDC1-201ENST00000368287 BRMS1Q9HCU9 246 aa5.64□□□□□ -1.51
ECHDC1-201ENST00000368287 COPRSQ9NQ92 184 aa5.64□□□□□ -1.51
ECHDC1-201ENST00000368287 ING1Q9UK53 422 aaPredicted RBP5.64□□□□□ -1.51
ECHDC1-201ENST00000368287 NUDT5Q9UKK9 219 aa5.64□□□□□ -1.51
ECHDC1-201ENST00000368287 TGM1P22735 817 aa5.63□□□□□ -1.51
ECHDC1-201ENST00000368287 L1CAMP32004 1257 aa5.63□□□□□ -1.51
ECHDC1-201ENST00000368287 EIF4A3P38919 411 aaKnown RBP5.63□□□□□ -1.51
ECHDC1-201ENST00000368287 ICAM4Q14773 271 aa5.63□□□□□ -1.51
ECHDC1-201ENST00000368287 SLC9A5Q14940 896 aa5.63□□□□□ -1.51
ECHDC1-201ENST00000368287 PALM2Q8IXS6 379 aa5.63□□□□□ -1.51
ECHDC1-201ENST00000368287 LINC00482Q8N8I6 264 aa5.63□□□□□ -1.51
ECHDC1-201ENST00000368287 SUPT16HQ9Y5B9 1047 aaKnown RBP5.63□□□□□ -1.51
ECHDC1-201ENST00000368287 PCDHGB7Q9Y5F8 929 aa5.63□□□□□ -1.51
ECHDC1-201ENST00000368287 LAMTOR5O43504 91 aa5.62□□□□□ -1.51
ECHDC1-201ENST00000368287 ATE1O95260 518 aa5.62□□□□□ -1.51
ECHDC1-201ENST00000368287 TBC1D8O95759 1140 aa5.62□□□□□ -1.51
ECHDC1-201ENST00000368287 CYP2C8P10632 490 aa5.62□□□□□ -1.51
ECHDC1-201ENST00000368287 RPL13P26373 211 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-201ENST00000368287 ZNF394Q53GI3 561 aa5.62□□□□□ -1.51
ECHDC1-201ENST00000368287 NT5DC4Q86YG4 428 aa5.62□□□□□ -1.51
ECHDC1-201ENST00000368287 ZNF654Q8IZM8 581 aa5.62□□□□□ -1.51
ECHDC1-201ENST00000368287 NLGN2Q8NFZ4 835 aa5.62□□□□□ -1.51
ECHDC1-201ENST00000368287 ZNF296Q8WUU4 475 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-201ENST00000368287 PEX11GQ96HA9 241 aa5.62□□□□□ -1.51
ECHDC1-201ENST00000368287 SRRTQ9BXP5 876 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-201ENST00000368287 ROBO2Q9HCK4 1378 aa5.62□□□□□ -1.51
ECHDC1-201ENST00000368287 H0Y8X5 98 aa5.61□□□□□ -1.51
ECHDC1-201ENST00000368287 ERCC5P28715 1186 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-201ENST00000368287 THBS2P35442 1172 aa5.61□□□□□ -1.51
ECHDC1-201ENST00000368287 NOP2P46087 812 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-201ENST00000368287 RACK1P63244 317 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-201ENST00000368287 SURF1Q15526 300 aa5.61□□□□□ -1.51
ECHDC1-201ENST00000368287 MCTP2Q6DN12 878 aa5.61□□□□□ -1.51
ECHDC1-201ENST00000368287 ZNF585AQ6P3V2 769 aa5.61□□□□□ -1.51
ECHDC1-201ENST00000368287 PTCHD1Q96NR3 888 aa5.61□□□□□ -1.51
ECHDC1-201ENST00000368287 DEF6Q9H4E7 631 aa5.61□□□□□ -1.51
ECHDC1-201ENST00000368287 C11orf21Q9P2W6 132 aa5.61□□□□□ -1.51
ECHDC1-201ENST00000368287 GARTP22102 1010 aa5.6□□□□□ -1.51
ECHDC1-201ENST00000368287 FBXL19Q6PCT2 694 aa5.6□□□□□ -1.51
ECHDC1-201ENST00000368287 PLEKHH3Q7Z736 793 aa5.6□□□□□ -1.51
ECHDC1-201ENST00000368287 KIAA0825Q8IV33 1275 aa5.6□□□□□ -1.51
ECHDC1-201ENST00000368287 C7orf61Q8IZ16 206 aa5.6□□□□□ -1.51
ECHDC1-201ENST00000368287 NETO2Q8NC67 525 aa5.6□□□□□ -1.51
ECHDC1-201ENST00000368287 GORASP1Q9BQQ3 440 aa5.6□□□□□ -1.51
ECHDC1-201ENST00000368287 SPON2Q9BUD6 331 aa5.6□□□□□ -1.51
ECHDC1-201ENST00000368287 CD248Q9HCU0 757 aa5.6□□□□□ -1.51
ECHDC1-201ENST00000368287 PPP4R1LQ9P1A2 415 aa5.6□□□□□ -1.51
ECHDC1-201ENST00000368287 DDX41Q9UJV9 622 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-201ENST00000368287 NPEPPSL1A6NEC2 478 aa5.59□□□□□ -1.51
ECHDC1-201ENST00000368287 GREM1O60565 184 aa5.59□□□□□ -1.51
ECHDC1-201ENST00000368287 ZBTB7AO95365 584 aa5.59□□□□□ -1.51
ECHDC1-201ENST00000368287 NME1P15531 152 aaKnown RBP5.59□□□□□ -1.51
ECHDC1-201ENST00000368287 TGFB2P61812 414 aa5.59□□□□□ -1.51
ECHDC1-201ENST00000368287 CCDC144CPQ8IYA2 1237 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms