RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 PFKFB2O60825 505 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 GUCY2DQ02846 1103 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 CUL1Q13616 776 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 HP1BP3Q5SSJ5 553 aaPredicted RBP7.94□□□□□ -1.14
SYNE1-208ENST00000367256 KAZNQ674X7 775 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 SPATA5Q8NB90 893 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 RUBCNQ92622 972 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 GLG1Q92896 1179 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 DCAF5Q96JK2 942 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 PNMA2Q9UL42 364 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 UNC13AQ9UPW8 1703 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 PRDM1O75626 825 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 PFKFB1P16118 471 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 SLC12A1Q13621 1099 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 ARHGEF16Q5VV41 709 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 KCTD16Q68DU8 428 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 SLFN12Q8IYM2 578 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 EPN1Q9Y6I3 576 aaPredicted RBP7.94□□□□□ -1.14
SYNE1-208ENST00000367256 ARHGEF10O15013 1369 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 A2MP01023 1474 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 DLATP10515 647 aaKnown RBP7.94□□□□□ -1.14
SYNE1-208ENST00000367256 KIF22Q14807 665 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.94□□□□□ -1.14
SYNE1-208ENST00000367256 CALR3Q96L12 384 aaKnown RBP7.94□□□□□ -1.14
SYNE1-208ENST00000367256 PANK4Q9NVE7 773 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 PACSIN2Q9UNF0 486 aaPredicted RBP7.94□□□□□ -1.14
SYNE1-208ENST00000367256 PCDHB13Q9Y5F0 798 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 ABCC4O15439 1325 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 CPP00450 1065 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 PDE1BQ01064 536 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 IQCB1Q15051 598 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 TMED2Q15363 201 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 NBPF10Q6P3W6 841 aaKnown RBP7.94□□□□□ -1.14
SYNE1-208ENST00000367256 MYOCDQ8IZQ8 938 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 MAML1Q92585 1016 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 PBRM1Q86U86 1689 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 ZMYM6O95789 1325 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 ICE2Q659A1 982 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 SBNO1A3KN83 1393 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 MYL7Q01449 175 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 LRRC23Q53EV4 343 aaPredicted RBP7.94□□□□□ -1.14
SYNE1-208ENST00000367256 MYO5CQ9NQX4 1742 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 MROH5Q6ZUA9 1318 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 PDE6AP16499 860 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 ATP5JP18859 108 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 TRAPPC10P48553 1259 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 IFRD2Q12894 506 aaPredicted RBP7.94□□□□□ -1.14
SYNE1-208ENST00000367256 TRMT10CQ7L0Y3 403 aaKnown RBP7.94□□□□□ -1.14
SYNE1-208ENST00000367256 CADPS2Q86UW7 1296 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 ZBTB8OSQ8IWT0 167 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 FGD4Q96M96 766 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 GSDMAQ96QA5 445 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 VPS54Q9P1Q0 977 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 INTUQ9ULD6 942 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 ABL1P00519 1130 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 CFBP00751 764 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 METTL22Q9BUU2 404 aaPredicted RBP7.94□□□□□ -1.14
SYNE1-208ENST00000367256 RTEL1Q9NZ71 1219 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 ARMCX3Q9UH62 379 aaPredicted RBP7.94□□□□□ -1.14
SYNE1-208ENST00000367256 SCINQ9Y6U3 715 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 PYGLP06737 847 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 KRT10P13645 584 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 SESTD1Q86VW0 696 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 MCUQ8NE86 351 aa7.94□□□□□ -1.14
SYNE1-208ENST00000367256 DDX25Q9UHL0 483 aaKnown RBP7.94□□□□□ -1.14
SYNE1-208ENST00000367256 A0A1W2PP64 1363 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 INTS9Q9NV88 658 aaKnown RBP7.93□□□□□ -1.14
SYNE1-208ENST00000367256 NSMFQ6X4W1 530 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 ARHGEF18Q6ZSZ5 1173 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 RFX6Q8HWS3 928 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 PANX2Q96RD6 677 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 ARHGAP31Q2M1Z3 1444 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 FBLN1P23142 703 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 PARD3BQ8TEW8 1205 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 NBPF3Q9H094 633 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 ADGRL2O95490 1459 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 hCG_1642624A0A1W2PR95 340 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 CFAP36Q96G28 342 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 POLR3EQ9NVU0 708 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 GLE1Q53GS7 698 aaKnown RBP7.93□□□□□ -1.14
SYNE1-208ENST00000367256 KRT80Q6KB66 452 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 FAM227BQ96M60 508 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 CCDC138Q96M89 665 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 MTMR6Q9Y217 621 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 KIAA0556O60303 1618 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 H3BRJ5 948 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 SORBS3O60504 671 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 BPIFB4P59827 614 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 EHHADHQ08426 723 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 NR1H3Q13133 447 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 SNX1Q13596 522 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 TRIM59Q8IWR1 403 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 ANKRD35Q8N283 1001 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 ABCC10Q5T3U5 1492 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 ADCY9O60503 1353 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 GPC4O75487 556 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 KCNA4P22459 653 aa7.93□□□□□ -1.14
SYNE1-208ENST00000367256 GNL1P36915 607 aaPredicted RBP7.93□□□□□ -1.14
SYNE1-208ENST00000367256 KPNA2P52292 529 aaKnown RBP7.93□□□□□ -1.14
SYNE1-208ENST00000367256 DYNC1I2Q13409 638 aaKnown RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms