RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 KDM4AO75164 1064 aa17.37■□□□□ 0.37
CTSD-202ENST00000367196 CALML3P27482 149 aa17.37■□□□□ 0.37
CTSD-202ENST00000367196 DUSP28Q4G0W2 176 aa17.37■□□□□ 0.37
CTSD-202ENST00000367196 BRDTQ58F21 947 aaPredicted RBP17.37■□□□□ 0.37
CTSD-202ENST00000367196 TAPT1Q6NXT6 567 aa17.37■□□□□ 0.37
CTSD-202ENST00000367196 PSRC1Q6PGN9 363 aaPredicted RBP17.37■□□□□ 0.37
CTSD-202ENST00000367196 CXCL17Q6UXB2 119 aa17.37■□□□□ 0.37
CTSD-202ENST00000367196 GUCD1Q96NT3 240 aa17.37■□□□□ 0.37
CTSD-202ENST00000367196 NKRFO15226 690 aaKnown RBP eCLIP17.36■□□□□ 0.37
CTSD-202ENST00000367196 CPT1AP50416 773 aa17.36■□□□□ 0.37
CTSD-202ENST00000367196 IRX5P78411 483 aaPredicted RBP17.36■□□□□ 0.37
CTSD-202ENST00000367196 PDE4DQ08499 809 aa17.36■□□□□ 0.37
CTSD-202ENST00000367196 ITGA7Q13683 1181 aa17.36■□□□□ 0.37
CTSD-202ENST00000367196 ASPRV1Q53RT3 343 aa17.36■□□□□ 0.37
CTSD-202ENST00000367196 FAM161BQ96MY7 647 aa17.36■□□□□ 0.37
CTSD-202ENST00000367196 ZSCAN10Q96SZ4 725 aaPredicted RBP17.36■□□□□ 0.37
CTSD-202ENST00000367196 ZKSCAN3Q9BRR0 538 aa17.36■□□□□ 0.37
CTSD-202ENST00000367196 UBAC1Q9BSL1 405 aa17.36■□□□□ 0.37
CTSD-202ENST00000367196 WDR11Q9BZH6 1224 aa17.36■□□□□ 0.37
CTSD-202ENST00000367196 MTIF3Q9H2K0 278 aaKnown RBP17.36■□□□□ 0.37
CTSD-202ENST00000367196 PDGFCQ9NRA1 345 aa17.36■□□□□ 0.37
CTSD-202ENST00000367196 POLR3EQ9NVU0 708 aa17.36■□□□□ 0.37
CTSD-202ENST00000367196 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.35■□□□□ 0.37
CTSD-202ENST00000367196 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.35■□□□□ 0.37
CTSD-202ENST00000367196 CD4P01730 458 aa17.35■□□□□ 0.37
CTSD-202ENST00000367196 RPS6P62753 249 aaKnown RBP17.35■□□□□ 0.37
CTSD-202ENST00000367196 SLC30A10Q6XR72 485 aa17.35■□□□□ 0.37
CTSD-202ENST00000367196 SLC43A3Q8NBI5 491 aa17.35■□□□□ 0.37
CTSD-202ENST00000367196 RGS22Q8NE09 1264 aa17.35■□□□□ 0.37
CTSD-202ENST00000367196 CLEC4DQ8WXI8 215 aa17.35■□□□□ 0.37
CTSD-202ENST00000367196 ANKS1AQ92625 1134 aa17.35■□□□□ 0.37
CTSD-202ENST00000367196 B4E1Z4 1266 aa17.34■□□□□ 0.37
CTSD-202ENST00000367196 TNKSO95271 1327 aa17.34■□□□□ 0.37
CTSD-202ENST00000367196 ABCB11O95342 1321 aa17.34■□□□□ 0.37
CTSD-202ENST00000367196 PARP1P09874 1014 aaKnown RBP17.34■□□□□ 0.37
CTSD-202ENST00000367196 MYH6P13533 1939 aa17.34■□□□□ 0.37
CTSD-202ENST00000367196 EPHB4P54760 987 aa17.34■□□□□ 0.37
CTSD-202ENST00000367196 PPP2R5BQ15173 497 aa17.34■□□□□ 0.37
CTSD-202ENST00000367196 CDC37Q16543 378 aaPredicted RBP17.34■□□□□ 0.37
CTSD-202ENST00000367196 USH1GQ495M9 461 aa17.34■□□□□ 0.37
CTSD-202ENST00000367196 MCF2L2Q86YR7 1114 aa17.34■□□□□ 0.37
CTSD-202ENST00000367196 SCFD2Q8WU76 684 aa17.34■□□□□ 0.37
CTSD-202ENST00000367196 RUFY2Q8WXA3 655 aa17.34■□□□□ 0.37
CTSD-202ENST00000367196 PPP1R12CQ9BZL4 782 aa17.34■□□□□ 0.37
CTSD-202ENST00000367196 SEMA6BQ9H3T3 888 aa17.34■□□□□ 0.37
CTSD-202ENST00000367196 GPHNQ9NQX3 736 aaPredicted RBP17.34■□□□□ 0.37
CTSD-202ENST00000367196 LAMA2P24043 3122 aaKnown RBP17.34■□□□□ 0.37
CTSD-202ENST00000367196 RBM47A0AV96 593 aaKnown RBP17.33■□□□□ 0.36
CTSD-202ENST00000367196 DLL1O00548 723 aa17.33■□□□□ 0.36
CTSD-202ENST00000367196 DHX16O60231 1041 aaKnown RBP17.33■□□□□ 0.36
CTSD-202ENST00000367196 GOLGA8HP0CJ92 632 aa17.33■□□□□ 0.36
CTSD-202ENST00000367196 TRDNQ13061 729 aa17.33■□□□□ 0.36
CTSD-202ENST00000367196 ENAHQ8N8S7 591 aaPredicted RBP17.33■□□□□ 0.36
CTSD-202ENST00000367196 OR6J1Q8NGC5 347 aa17.33■□□□□ 0.36
CTSD-202ENST00000367196 PURBQ96QR8 312 aaKnown RBP17.33■□□□□ 0.36
CTSD-202ENST00000367196 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.33■□□□□ 0.36
CTSD-202ENST00000367196 HIPK3Q9H422 1215 aa17.33■□□□□ 0.36
CTSD-202ENST00000367196 KPNA6O60684 536 aa17.32■□□□□ 0.36
CTSD-202ENST00000367196 SUPT20HL2P0C7V6 817 aa17.32■□□□□ 0.36
CTSD-202ENST00000367196 CSF2RAP15509 400 aa17.32■□□□□ 0.36
CTSD-202ENST00000367196 EDNRBP24530 442 aa17.32■□□□□ 0.36
CTSD-202ENST00000367196 TTLL4Q14679 1199 aa17.32■□□□□ 0.36
CTSD-202ENST00000367196 IFIT1BQ5T764 474 aaKnown RBP17.32■□□□□ 0.36
CTSD-202ENST00000367196 CDX2Q99626 313 aaPredicted RBP17.32■□□□□ 0.36
CTSD-202ENST00000367196 ZSWIM5Q9P217 1185 aa17.32■□□□□ 0.36
CTSD-202ENST00000367196 DDX49Q9Y6V7 483 aaKnown RBP17.32■□□□□ 0.36
CTSD-202ENST00000367196 DNAJB2P25686 324 aa17.31■□□□□ 0.36
CTSD-202ENST00000367196 TMEM240Q5SV17 173 aa17.31■□□□□ 0.36
CTSD-202ENST00000367196 TTC22Q5TAA0 569 aa17.31■□□□□ 0.36
CTSD-202ENST00000367196 ADGRF4Q8IZF3 695 aa17.31■□□□□ 0.36
CTSD-202ENST00000367196 UBA5Q9GZZ9 404 aa17.31■□□□□ 0.36
CTSD-202ENST00000367196 IL23AQ9NPF7 189 aa17.31■□□□□ 0.36
CTSD-202ENST00000367196 MRPL11Q9Y3B7 192 aaKnown RBP17.31■□□□□ 0.36
CTSD-202ENST00000367196 CDH23Q9H251 3354 aa17.31■□□□□ 0.36
CTSD-202ENST00000367196 B4GALT4O60513 344 aa17.3■□□□□ 0.36
CTSD-202ENST00000367196 FOSL2P15408 326 aa17.3■□□□□ 0.36
CTSD-202ENST00000367196 CYP2C18P33260 490 aa17.3■□□□□ 0.36
CTSD-202ENST00000367196 PSMC6P62333 389 aa17.3■□□□□ 0.36
CTSD-202ENST00000367196 PURAQ00577 322 aaKnown RBP17.3■□□□□ 0.36
CTSD-202ENST00000367196 FBXO11Q86XK2 927 aa17.3■□□□□ 0.36
CTSD-202ENST00000367196 RPUSD2Q8IZ73 545 aaKnown RBP17.3■□□□□ 0.36
CTSD-202ENST00000367196 MAFAQ8NHW3 353 aaPredicted RBP17.3■□□□□ 0.36
CTSD-202ENST00000367196 NSUN6Q8TEA1 469 aaKnown RBP17.3■□□□□ 0.36
CTSD-202ENST00000367196 MTG1Q9BT17 334 aaPredicted RBP17.3■□□□□ 0.36
CTSD-202ENST00000367196 TTYH1Q9H313 450 aaPredicted RBP17.3■□□□□ 0.36
CTSD-202ENST00000367196 SUPT16HQ9Y5B9 1047 aaKnown RBP17.3■□□□□ 0.36
CTSD-202ENST00000367196 ERICH2A1L162 156 aa17.29■□□□□ 0.36
CTSD-202ENST00000367196 PFKMP08237 780 aa17.29■□□□□ 0.36
CTSD-202ENST00000367196 MYL3P08590 195 aa17.29■□□□□ 0.36
CTSD-202ENST00000367196 TXNP10599 105 aaKnown RBP17.29■□□□□ 0.36
CTSD-202ENST00000367196 TRAF1Q13077 416 aa17.29■□□□□ 0.36
CTSD-202ENST00000367196 QRICH1Q2TAL8 776 aa17.29■□□□□ 0.36
CTSD-202ENST00000367196 ZNF365Q70YC5 407 aa17.29■□□□□ 0.36
CTSD-202ENST00000367196 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.29■□□□□ 0.36
CTSD-202ENST00000367196 TIFAQ96CG3 184 aa17.29■□□□□ 0.36
CTSD-202ENST00000367196 IWS1Q96ST2 819 aa17.29■□□□□ 0.36
CTSD-202ENST00000367196 NOC4LQ9BVI4 516 aaKnown RBP17.29■□□□□ 0.36
CTSD-202ENST00000367196 ALDH8A1Q9H2A2 487 aaPredicted RBP17.29■□□□□ 0.36
CTSD-202ENST00000367196 U3KPZ7 1027 aaPredicted RBP17.29■□□□□ 0.36
CTSD-202ENST00000367196 GRIN2DO15399 1336 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms