RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, human

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-216	ENST00000366744	FBXO16	Q8IX29	292 aa	Predicted RBP	10.8	□□□□□ -0.68
MRPL55-216	ENST00000366744	STAG2	Q8N3U4	1231 aa		10.8	□□□□□ -0.68
MRPL55-216	ENST00000366744	PCSK9	Q8NBP7	692 aa	Known RBP	10.8	□□□□□ -0.68
MRPL55-216	ENST00000366744	CLEC4D	Q8WXI8	215 aa		10.8	□□□□□ -0.68
MRPL55-216	ENST00000366744	LENG1	Q96BZ8	264 aa	Predicted RBP	10.8	□□□□□ -0.68
MRPL55-216	ENST00000366744	PCDHA1	Q9Y5I3	950 aa		10.8	□□□□□ -0.68
MRPL55-216	ENST00000366744	PNMA6F	A0A0J9YX94	578 aa		10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	SOWAHB	A6NEL2	793 aa		10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	MOXD2P	A6NHM9	499 aa		10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	ZEB2	O60315	1214 aa		10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	PGK1	P00558	417 aa		10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	CFB	P00751	764 aa		10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	COL6A1	P12109	1028 aa		10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	PSMA5	P28066	241 aa		10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	ATN1	P54259	1190 aa	Predicted RBP	10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	TNFAIP2	Q03169	654 aa		10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	PPP2R5B	Q15173	497 aa		10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	BLOC1S2	Q6QNY1	142 aa		10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	DHX32	Q7L7V1	743 aa	Known RBP	10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	TLK2	Q86UE8	772 aa		10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	RGS22	Q8NE09	1264 aa		10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	IGDCC4	Q8TDY8	1250 aa		10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	NSUN6	Q8TEA1	469 aa	Known RBP	10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	PIBF1	Q8WXW3	757 aa		10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	CUL5	Q93034	780 aa		10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	FGD4	Q96M96	766 aa		10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	GLT1D1	Q96MS3	346 aa		10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	JAKMIP1	Q96N16	626 aa	Known RBP	10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	PIGS	Q96S52	555 aa		10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	MYL10	Q9BUA6	226 aa		10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	SPZ1	Q9BXG8	430 aa		10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	LRRC2	Q9BYS8	371 aa		10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	RBM28	Q9NW13	759 aa	Known RBP	10.79	□□□□□ -0.68
MRPL55-216	ENST00000366744	ZBTB43	O43298	467 aa		10.78	□□□□□ -0.68
MRPL55-216	ENST00000366744	EPB41L2	O43491	1005 aa	Known RBP	10.78	□□□□□ -0.68
MRPL55-216	ENST00000366744	HSPA4	P34932	840 aa		10.78	□□□□□ -0.68
MRPL55-216	ENST00000366744	ADCYAP1R1	P41586	468 aa		10.78	□□□□□ -0.68
MRPL55-216	ENST00000366744	MNX1	P50219	401 aa	Predicted RBP	10.78	□□□□□ -0.68
MRPL55-216	ENST00000366744	TSGA10IP	Q3SY00	556 aa		10.78	□□□□□ -0.68
MRPL55-216	ENST00000366744	ARHGEF16	Q5VV41	709 aa		10.78	□□□□□ -0.68
MRPL55-216	ENST00000366744	SAMD3	Q8N6K7	520 aa		10.78	□□□□□ -0.68
MRPL55-216	ENST00000366744	SCFD2	Q8WU76	684 aa		10.78	□□□□□ -0.68
MRPL55-216	ENST00000366744	FERMT2	Q96AC1	680 aa		10.78	□□□□□ -0.68
MRPL55-216	ENST00000366744	RMDN3	Q96TC7	470 aa		10.78	□□□□□ -0.68
MRPL55-216	ENST00000366744	TSEN34	Q9BSV6	310 aa	Known RBP	10.78	□□□□□ -0.68
MRPL55-216	ENST00000366744	SENP2	Q9HC62	589 aa		10.78	□□□□□ -0.68
MRPL55-216	ENST00000366744	STARD7	Q9NQZ5	370 aa		10.78	□□□□□ -0.68
MRPL55-216	ENST00000366744	MAP3K20	Q9NYL2	800 aa	Known RBP	10.78	□□□□□ -0.68
MRPL55-216	ENST00000366744	PHF24	Q9UPV7	400 aa		10.78	□□□□□ -0.68
MRPL55-216	ENST00000366744	ATP11B	Q9Y2G3	1177 aa		10.78	□□□□□ -0.68
MRPL55-216	ENST00000366744	MROH7	Q68CQ1	1323 aa		10.78	□□□□□ -0.68
MRPL55-216	ENST00000366744	DOCK5	Q9H7D0	1870 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	KLF18	A0A0U1RQI7	1052 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744		A0A1W2PQ45	241 aa	Predicted RBP	10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744		A0A1W2PQY0	241 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	GOLGA8A	A7E2F4	631 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	GOLGA8B	A8MQT2	603 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	GCOM1	H8Y6P7	765 aa	Predicted RBP	10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	ADAMTS4	O75173	837 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	POLR2M	P0CAP2	368 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	RXRA	P19793	462 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	CAST	P20810	708 aa	Known RBP	10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	CST5	P28325	142 aa	Predicted RBP	10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	SMARCA1	P28370	1054 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	CPT1A	P50416	773 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	ACLY	P53396	1101 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	RCAN1	P53805	252 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	RTP1	P59025	263 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	TTLL4	Q14679	1199 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	RTN1	Q16799	776 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	LRRC26	Q2I0M4	334 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	GNAS	Q5JWF2	1037 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	IQSEC1	Q6DN90	963 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	APOA5	Q6Q788	366 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	CHRDL2	Q6WN34	429 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	SGMS1	Q86VZ5	419 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	VTI1A	Q96AJ9	217 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	IWS1	Q96ST2	819 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	LBHD1	Q9BQE6	289 aa	Predicted RBP	10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	RIOX1	Q9H6W3	641 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	PRDM5	Q9NQX1	630 aa	Predicted RBP	10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	ASTN1	O14525	1302 aa		10.77	□□□□□ -0.69
MRPL55-216	ENST00000366744	CCDC196	A0A1B0GTZ2	297 aa		10.76	□□□□□ -0.69
MRPL55-216	ENST00000366744	NKRF	O15226	690 aa	Known RBP eCLIP	10.76	□□□□□ -0.69
MRPL55-216	ENST00000366744	EIF2AK2	P19525	551 aa	Known RBP	10.76	□□□□□ -0.69
MRPL55-216	ENST00000366744	GJA9	P57773	515 aa		10.76	□□□□□ -0.69
MRPL55-216	ENST00000366744	STXBP2	Q15833	593 aa		10.76	□□□□□ -0.69
MRPL55-216	ENST00000366744	FSCN1	Q16658	493 aa	Known RBP	10.76	□□□□□ -0.69
MRPL55-216	ENST00000366744	TMTC3	Q6ZXV5	915 aa		10.76	□□□□□ -0.69
MRPL55-216	ENST00000366744	RAB11FIP4	Q86YS3	637 aa		10.76	□□□□□ -0.69
MRPL55-216	ENST00000366744	FANCB	Q8NB91	859 aa		10.76	□□□□□ -0.69
MRPL55-216	ENST00000366744	OR6J1	Q8NGC5	347 aa		10.76	□□□□□ -0.69
MRPL55-216	ENST00000366744	SMARCC2	Q8TAQ2	1214 aa		10.76	□□□□□ -0.69
MRPL55-216	ENST00000366744	SYTL5	Q8TDW5	730 aa	Predicted RBP	10.76	□□□□□ -0.69
MRPL55-216	ENST00000366744	MORC4	Q8TE76	937 aa		10.76	□□□□□ -0.69
MRPL55-216	ENST00000366744	MTMR8	Q96EF0	704 aa		10.76	□□□□□ -0.69
MRPL55-216	ENST00000366744	TCEANC2	Q96MN5	208 aa		10.76	□□□□□ -0.69
MRPL55-216	ENST00000366744	PURB	Q96QR8	312 aa	Known RBP	10.76	□□□□□ -0.69
MRPL55-216	ENST00000366744	WDR11	Q9BZH6	1224 aa		10.76	□□□□□ -0.69
MRPL55-216	ENST00000366744	KATNBL1	Q9H079	304 aa		10.76	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms