RNA–Protein interactions for RNA: ENST00000366739.5

MRPL55-212, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-212ENST00000366739 EPOPA6NHQ4 379 aa13.56□□□□□ -0.24
MRPL55-212ENST00000366739 NMT2O60551 498 aa13.56□□□□□ -0.24
MRPL55-212ENST00000366739 SLC3A2P08195 630 aaKnown RBP13.56□□□□□ -0.24
MRPL55-212ENST00000366739 DUSP28Q4G0W2 176 aa13.56□□□□□ -0.24
MRPL55-212ENST00000366739 TMEM67Q5HYA8 995 aa13.56□□□□□ -0.24
MRPL55-212ENST00000366739 C20orf194Q5TEA3 1177 aa13.56□□□□□ -0.24
MRPL55-212ENST00000366739 KRT40Q6A162 431 aa13.56□□□□□ -0.24
MRPL55-212ENST00000366739 RCSD1Q6JBY9 416 aa13.56□□□□□ -0.24
MRPL55-212ENST00000366739 PPP1R13LQ8WUF5 828 aa13.56□□□□□ -0.24
MRPL55-212ENST00000366739 FAM122AQ96E09 287 aa13.56□□□□□ -0.24
MRPL55-212ENST00000366739 NAPBQ9H115 298 aa13.56□□□□□ -0.24
MRPL55-212ENST00000366739 INCENPQ9NQS7 918 aa13.56□□□□□ -0.24
MRPL55-212ENST00000366739 MTMR7Q9Y216 660 aa13.56□□□□□ -0.24
MRPL55-212ENST00000366739 MTCH2Q9Y6C9 303 aa13.56□□□□□ -0.24
MRPL55-212ENST00000366739 TCF20Q9UGU0 1960 aaKnown RBP13.56□□□□□ -0.24
MRPL55-212ENST00000366739 TRANK1O15050 2925 aa13.56□□□□□ -0.24
MRPL55-212ENST00000366739 LCTP09848 1927 aa13.55□□□□□ -0.24
MRPL55-212ENST00000366739 ERC2O15083 957 aa13.55□□□□□ -0.24
MRPL55-212ENST00000366739 ARHGEF15O94989 841 aa13.55□□□□□ -0.24
MRPL55-212ENST00000366739 PFKMP08237 780 aa13.55□□□□□ -0.24
MRPL55-212ENST00000366739 MYL3P08590 195 aa13.55□□□□□ -0.24
MRPL55-212ENST00000366739 SUPT20HL2P0C7V6 817 aa13.55□□□□□ -0.24
MRPL55-212ENST00000366739 PURAQ00577 322 aaKnown RBP13.55□□□□□ -0.24
MRPL55-212ENST00000366739 BAATQ14032 418 aaPredicted RBP13.55□□□□□ -0.24
MRPL55-212ENST00000366739 AAK1Q2M2I8 961 aa13.55□□□□□ -0.24
MRPL55-212ENST00000366739 MIER1Q8N108 512 aa13.55□□□□□ -0.24
MRPL55-212ENST00000366739 C1QTNF1Q9BXJ1 281 aa13.55□□□□□ -0.24
MRPL55-212ENST00000366739 WDR11Q9BZH6 1224 aa13.55□□□□□ -0.24
MRPL55-212ENST00000366739 IL17RBQ9NRM6 502 aa13.55□□□□□ -0.24
MRPL55-212ENST00000366739 POLR3EQ9NVU0 708 aa13.55□□□□□ -0.24
MRPL55-212ENST00000366739 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.55□□□□□ -0.24
MRPL55-212ENST00000366739 PRRC2BQ5JSZ5 2229 aaKnown RBP13.54□□□□□ -0.24
MRPL55-212ENST00000366739 TSPY2A6NKD2 308 aa13.54□□□□□ -0.24
MRPL55-212ENST00000366739 NFIBO00712 420 aa13.54□□□□□ -0.24
MRPL55-212ENST00000366739 FOXP2O15409 715 aa13.54□□□□□ -0.24
MRPL55-212ENST00000366739 GTPBP6O43824 516 aaPredicted RBP13.54□□□□□ -0.24
MRPL55-212ENST00000366739 ICAM1P05362 532 aa13.54□□□□□ -0.24
MRPL55-212ENST00000366739 POU3F3P20264 500 aaPredicted RBP13.54□□□□□ -0.24
MRPL55-212ENST00000366739 ALDH5A1P51649 535 aaPredicted RBP13.54□□□□□ -0.24
MRPL55-212ENST00000366739 CTDSPL2Q05D32 466 aa13.54□□□□□ -0.24
MRPL55-212ENST00000366739 CCDC96Q2M329 555 aa13.54□□□□□ -0.24
MRPL55-212ENST00000366739 FAM47CQ5HY64 1035 aa13.54□□□□□ -0.24
MRPL55-212ENST00000366739 TTBK2Q6IQ55 1244 aa13.54□□□□□ -0.24
MRPL55-212ENST00000366739 OR6J1Q8NGC5 347 aa13.54□□□□□ -0.24
MRPL55-212ENST00000366739 MTG1Q9BT17 334 aaPredicted RBP13.54□□□□□ -0.24
MRPL55-212ENST00000366739 ACTN1P12814 892 aa13.53□□□□□ -0.24
MRPL55-212ENST00000366739 SLC16A2P36021 539 aa13.53□□□□□ -0.24
MRPL55-212ENST00000366739 CPT1AP50416 773 aa13.53□□□□□ -0.24
MRPL55-212ENST00000366739 TAP1Q03518 808 aa13.53□□□□□ -0.24
MRPL55-212ENST00000366739 LRRFIP1Q32MZ4 808 aaKnown RBP13.53□□□□□ -0.24
MRPL55-212ENST00000366739 NBPF20Q3BBV1 942 aa13.53□□□□□ -0.24
MRPL55-212ENST00000366739 PPP4R3BQ5MIZ7 849 aa13.53□□□□□ -0.24
MRPL55-212ENST00000366739 ZMYM1Q5SVZ6 1142 aa13.53□□□□□ -0.24
MRPL55-212ENST00000366739 SLC30A10Q6XR72 485 aa13.53□□□□□ -0.24
MRPL55-212ENST00000366739 ARNTL2Q8WYA1 636 aa13.53□□□□□ -0.24
MRPL55-212ENST00000366739 SLC9A7Q96T83 725 aa13.53□□□□□ -0.24
MRPL55-212ENST00000366739 RANBP17Q9H2T7 1088 aaKnown RBP13.53□□□□□ -0.24
MRPL55-212ENST00000366739 DCTPP1Q9H773 170 aa13.53□□□□□ -0.24
MRPL55-212ENST00000366739 ADD3Q9UEY8 706 aaKnown RBP13.53□□□□□ -0.24
MRPL55-212ENST00000366739 SCN5AQ14524 2016 aa13.52□□□□□ -0.24
MRPL55-212ENST00000366739 RBM47A0AV96 593 aaKnown RBP13.52□□□□□ -0.25
MRPL55-212ENST00000366739 PTPDC1A2A3K4 754 aa13.52□□□□□ -0.25
MRPL55-212ENST00000366739 IQCF3P0C7M6 154 aa13.52□□□□□ -0.25
MRPL55-212ENST00000366739 RFC2P35250 354 aa13.52□□□□□ -0.25
MRPL55-212ENST00000366739 SPRED2Q7Z698 418 aa13.52□□□□□ -0.25
MRPL55-212ENST00000366739 HERC6Q8IVU3 1022 aa13.52□□□□□ -0.25
MRPL55-212ENST00000366739 OTUD7AQ8TE49 926 aaPredicted RBP13.52□□□□□ -0.25
MRPL55-212ENST00000366739 DCAF4Q8WV16 495 aa13.52□□□□□ -0.25
MRPL55-212ENST00000366739 FSD1Q9BTV5 496 aa13.52□□□□□ -0.25
MRPL55-212ENST00000366739 FTOQ9C0B1 505 aaKnown RBP eCLIP13.52□□□□□ -0.25
MRPL55-212ENST00000366739 EPHX3Q9H6B9 360 aa13.52□□□□□ -0.25
MRPL55-212ENST00000366739 GPHNQ9NQX3 736 aaPredicted RBP13.52□□□□□ -0.25
MRPL55-212ENST00000366739 FRMPD2Q68DX3 1309 aaPredicted RBP13.51□□□□□ -0.25
MRPL55-212ENST00000366739 PITPNM1O00562 1244 aa13.51□□□□□ -0.25
MRPL55-212ENST00000366739 TLL1O43897 1013 aa13.51□□□□□ -0.25
MRPL55-212ENST00000366739 RANBP6O60518 1105 aaKnown RBP13.51□□□□□ -0.25
MRPL55-212ENST00000366739 CALML3P27482 149 aa13.51□□□□□ -0.25
MRPL55-212ENST00000366739 NOVP48745 357 aa13.51□□□□□ -0.25
MRPL55-212ENST00000366739 SYDE2Q5VT97 1194 aa13.51□□□□□ -0.25
MRPL55-212ENST00000366739 BTNL9Q6UXG8 535 aa13.51□□□□□ -0.25
MRPL55-212ENST00000366739 RETREG2Q8NC44 543 aa13.51□□□□□ -0.25
MRPL55-212ENST00000366739 PHOSPHO2Q8TCD6 241 aa13.51□□□□□ -0.25
MRPL55-212ENST00000366739 PI4K2BQ8TCG2 481 aa13.51□□□□□ -0.25
MRPL55-212ENST00000366739 CLEC4DQ8WXI8 215 aa13.51□□□□□ -0.25
MRPL55-212ENST00000366739 COPS5Q92905 334 aa13.51□□□□□ -0.25
MRPL55-212ENST00000366739 GPCPD1Q9NPB8 672 aa13.51□□□□□ -0.25
MRPL55-212ENST00000366739 RCAN3Q9UKA8 241 aa13.51□□□□□ -0.25
MRPL55-212ENST00000366739 COG5Q9UP83 839 aa13.51□□□□□ -0.25
MRPL55-212ENST00000366739 TTC41PQ6P2S7 1318 aa13.5□□□□□ -0.25
MRPL55-212ENST00000366739 LOC102724159A0A0B4J2E5 919 aa13.5□□□□□ -0.25
MRPL55-212ENST00000366739 PDE4DQ08499 809 aa13.5□□□□□ -0.25
MRPL55-212ENST00000366739 GRB10Q13322 594 aa13.5□□□□□ -0.25
MRPL55-212ENST00000366739 PPP2R5BQ15173 497 aa13.5□□□□□ -0.25
MRPL55-212ENST00000366739 PWP2Q15269 919 aaKnown RBP13.5□□□□□ -0.25
MRPL55-212ENST00000366739 BRDTQ58F21 947 aaPredicted RBP13.5□□□□□ -0.25
MRPL55-212ENST00000366739 VPS53Q5VIR6 699 aa13.5□□□□□ -0.25
MRPL55-212ENST00000366739 NFRKBQ6P4R8 1299 aa13.5□□□□□ -0.25
MRPL55-212ENST00000366739 LRFN3Q9BTN0 628 aa13.5□□□□□ -0.25
MRPL55-212ENST00000366739 SCN10AQ9Y5Y9 1956 aa13.5□□□□□ -0.25
MRPL55-212ENST00000366739 RAD50Q92878 1312 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms