RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 SLC43A3Q8NBI5 491 aa16■□□□□ 0.15
TNFRSF1A-202ENST00000366159 MAP4K1Q92918 833 aa16■□□□□ 0.15
TNFRSF1A-202ENST00000366159 GLT1D1Q96MS3 346 aa16■□□□□ 0.15
TNFRSF1A-202ENST00000366159 PRDM5Q9NQX1 630 aaPredicted RBP16■□□□□ 0.15
TNFRSF1A-202ENST00000366159 ADD3Q9UEY8 706 aaKnown RBP16■□□□□ 0.15
TNFRSF1A-202ENST00000366159 TAF6LQ9Y6J9 622 aa16■□□□□ 0.15
TNFRSF1A-202ENST00000366159 PTPDC1A2A3K4 754 aa15.99■□□□□ 0.15
TNFRSF1A-202ENST00000366159 PQBP1O60828 265 aaKnown RBP15.99■□□□□ 0.15
TNFRSF1A-202ENST00000366159 BEX3Q00994 111 aa15.99■□□□□ 0.15
TNFRSF1A-202ENST00000366159 EEPD1Q7L9B9 569 aa15.99■□□□□ 0.15
TNFRSF1A-202ENST00000366159 TLK2Q86UE8 772 aa15.99■□□□□ 0.15
TNFRSF1A-202ENST00000366159 DNERQ8NFT8 737 aa15.99■□□□□ 0.15
TNFRSF1A-202ENST00000366159 MTMR8Q96EF0 704 aa15.99■□□□□ 0.15
TNFRSF1A-202ENST00000366159 JMJD4Q9H9V9 463 aa15.99■□□□□ 0.15
TNFRSF1A-202ENST00000366159 TBX21Q9UL17 535 aa15.99■□□□□ 0.15
TNFRSF1A-202ENST00000366159 U3KPZ7 1027 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF1A-202ENST00000366159 ARVCFO00192 962 aa15.98■□□□□ 0.15
TNFRSF1A-202ENST00000366159 PARP1P09874 1014 aaKnown RBP15.98■□□□□ 0.15
TNFRSF1A-202ENST00000366159 SHHQ15465 462 aa15.98■□□□□ 0.15
TNFRSF1A-202ENST00000366159 CDC37Q16543 378 aaPredicted RBP15.98■□□□□ 0.15
TNFRSF1A-202ENST00000366159 DUSP28Q4G0W2 176 aa15.98■□□□□ 0.15
TNFRSF1A-202ENST00000366159 C9orf50Q5SZB4 431 aa15.98■□□□□ 0.15
TNFRSF1A-202ENST00000366159 STOX1Q6ZVD7 989 aa15.98■□□□□ 0.15
TNFRSF1A-202ENST00000366159 STAG2Q8N3U4 1231 aa15.98■□□□□ 0.15
TNFRSF1A-202ENST00000366159 TBC1D5Q92609 795 aa15.98■□□□□ 0.15
TNFRSF1A-202ENST00000366159 UBAC1Q9BSL1 405 aa15.98■□□□□ 0.15
TNFRSF1A-202ENST00000366159 MAD2L2Q9UI95 211 aa15.98■□□□□ 0.15
TNFRSF1A-202ENST00000366159 GRIN2DO15399 1336 aa15.98■□□□□ 0.15
TNFRSF1A-202ENST00000366159 A0A0U1RQG5 324 aaPredicted RBP15.97■□□□□ 0.15
TNFRSF1A-202ENST00000366159 PALM3A6NDB9 673 aaPredicted RBP15.97■□□□□ 0.15
TNFRSF1A-202ENST00000366159 DCDC2CA8MYV0 355 aa15.97■□□□□ 0.15
TNFRSF1A-202ENST00000366159 DYNC1LI2O43237 492 aaPredicted RBP15.97■□□□□ 0.15
TNFRSF1A-202ENST00000366159 CD4P01730 458 aa15.97■□□□□ 0.15
TNFRSF1A-202ENST00000366159 CALML3P27482 149 aa15.97■□□□□ 0.15
TNFRSF1A-202ENST00000366159 FSCN1Q16658 493 aaKnown RBP15.97■□□□□ 0.15
TNFRSF1A-202ENST00000366159 QRICH1Q2TAL8 776 aa15.97■□□□□ 0.15
TNFRSF1A-202ENST00000366159 USH1GQ495M9 461 aa15.97■□□□□ 0.15
TNFRSF1A-202ENST00000366159 IFIT1BQ5T764 474 aaKnown RBP15.97■□□□□ 0.15
TNFRSF1A-202ENST00000366159 KIAA1211Q6ZU35 1233 aa15.97■□□□□ 0.15
TNFRSF1A-202ENST00000366159 FAM126BQ8IXS8 530 aa15.97■□□□□ 0.15
TNFRSF1A-202ENST00000366159 TMEM39AQ9NV64 488 aa15.97■□□□□ 0.15
TNFRSF1A-202ENST00000366159 ABCB11O95342 1321 aa15.97■□□□□ 0.15
TNFRSF1A-202ENST00000366159 E7EWF7 191 aa15.96■□□□□ 0.15
TNFRSF1A-202ENST00000366159 CABYRO75952 493 aa15.96■□□□□ 0.15
TNFRSF1A-202ENST00000366159 EPHB4P54760 987 aa15.96■□□□□ 0.15
TNFRSF1A-202ENST00000366159 GHRHRQ02643 423 aa15.96■□□□□ 0.15
TNFRSF1A-202ENST00000366159 SLC35G1Q2M3R5 365 aa15.96■□□□□ 0.15
TNFRSF1A-202ENST00000366159 SENP2Q9HC62 589 aa15.96■□□□□ 0.15
TNFRSF1A-202ENST00000366159 MROH7Q68CQ1 1323 aa15.96■□□□□ 0.15
TNFRSF1A-202ENST00000366159 KLRF2D3W0D1 207 aa15.95■□□□□ 0.14
TNFRSF1A-202ENST00000366159 OPLAHO14841 1288 aa15.95■□□□□ 0.14
TNFRSF1A-202ENST00000366159 TIMP1P01033 207 aa15.95■□□□□ 0.14
TNFRSF1A-202ENST00000366159 RAG1P15918 1043 aa15.95■□□□□ 0.14
TNFRSF1A-202ENST00000366159 TROAPQ12815 778 aa15.95■□□□□ 0.14
TNFRSF1A-202ENST00000366159 TRDNQ13061 729 aa15.95■□□□□ 0.14
TNFRSF1A-202ENST00000366159 FAM109BQ6ICB4 259 aaPredicted RBP15.95■□□□□ 0.14
TNFRSF1A-202ENST00000366159 CXCL17Q6UXB2 119 aa15.95■□□□□ 0.14
TNFRSF1A-202ENST00000366159 NOL8Q76FK4 1167 aaKnown RBP15.95■□□□□ 0.14
TNFRSF1A-202ENST00000366159 Q7L0L9 218 aa15.95■□□□□ 0.14
TNFRSF1A-202ENST00000366159 DEFB123Q8N688 67 aa15.95■□□□□ 0.14
TNFRSF1A-202ENST00000366159 WDR11Q9BZH6 1224 aa15.95■□□□□ 0.14
TNFRSF1A-202ENST00000366159 AP5M1Q9H0R1 490 aa15.95■□□□□ 0.14
TNFRSF1A-202ENST00000366159 COL20A1Q9P218 1284 aa15.95■□□□□ 0.14
TNFRSF1A-202ENST00000366159 PPP1R11O60927 126 aaPredicted RBP15.94■□□□□ 0.14
TNFRSF1A-202ENST00000366159 ANTXR2P58335 489 aa15.94■□□□□ 0.14
TNFRSF1A-202ENST00000366159 GRM4Q14833 912 aa15.94■□□□□ 0.14
TNFRSF1A-202ENST00000366159 FBXO11Q86XK2 927 aa15.94■□□□□ 0.14
TNFRSF1A-202ENST00000366159 MB21D2Q8IYB1 491 aaPredicted RBP15.94■□□□□ 0.14
TNFRSF1A-202ENST00000366159 NCOA7Q8NI08 942 aa15.94■□□□□ 0.14
TNFRSF1A-202ENST00000366159 SYTL5Q8TDW5 730 aaPredicted RBP15.94■□□□□ 0.14
TNFRSF1A-202ENST00000366159 IGDCC4Q8TDY8 1250 aa15.94■□□□□ 0.14
TNFRSF1A-202ENST00000366159 TAAR1Q96RJ0 339 aa15.94■□□□□ 0.14
TNFRSF1A-202ENST00000366159 SEZ6LQ9BYH1 1024 aa15.94■□□□□ 0.14
TNFRSF1A-202ENST00000366159 LSG1Q9H089 658 aaKnown RBP15.94■□□□□ 0.14
TNFRSF1A-202ENST00000366159 RIOX1Q9H6W3 641 aa15.94■□□□□ 0.14
TNFRSF1A-202ENST00000366159 VAT1LQ9HCJ6 419 aa15.94■□□□□ 0.14
TNFRSF1A-202ENST00000366159 MTMR10Q9NXD2 777 aa15.94■□□□□ 0.14
TNFRSF1A-202ENST00000366159 ZEB2O60315 1214 aa15.94■□□□□ 0.14
TNFRSF1A-202ENST00000366159 PDE4DQ08499 809 aa15.94■□□□□ 0.14
TNFRSF1A-202ENST00000366159 ITGA7Q13683 1181 aa15.94■□□□□ 0.14
TNFRSF1A-202ENST00000366159 MFSD5Q6N075 450 aa15.94■□□□□ 0.14
TNFRSF1A-202ENST00000366159 MCF2L2Q86YR7 1114 aa15.94■□□□□ 0.14
TNFRSF1A-202ENST00000366159 VTI1AQ96AJ9 217 aa15.94■□□□□ 0.14
TNFRSF1A-202ENST00000366159 MRPL11Q9Y3B7 192 aaKnown RBP15.94■□□□□ 0.14
TNFRSF1A-202ENST00000366159 RBM8AQ9Y5S9 174 aaKnown RBP15.94■□□□□ 0.14
TNFRSF1A-202ENST00000366159 MYH6P13533 1939 aa15.93■□□□□ 0.14
TNFRSF1A-202ENST00000366159 IFIT3O14879 490 aaKnown RBP15.93■□□□□ 0.14
TNFRSF1A-202ENST00000366159 ZBTB5O15062 677 aa15.93■□□□□ 0.14
TNFRSF1A-202ENST00000366159 NKRFO15226 690 aaKnown RBP eCLIP15.93■□□□□ 0.14
TNFRSF1A-202ENST00000366159 CYTH3O43739 400 aa15.93■□□□□ 0.14
TNFRSF1A-202ENST00000366159 ARIH2O95376 493 aa15.93■□□□□ 0.14
TNFRSF1A-202ENST00000366159 HSD17B4P51659 736 aa15.93■□□□□ 0.14
TNFRSF1A-202ENST00000366159 FPGSQ05932 587 aa15.93■□□□□ 0.14
TNFRSF1A-202ENST00000366159 CCDC62Q6P9F0 684 aa15.93■□□□□ 0.14
TNFRSF1A-202ENST00000366159 C16orf59Q7L2K0 433 aa15.93■□□□□ 0.14
TNFRSF1A-202ENST00000366159 NSUN6Q8TEA1 469 aaKnown RBP15.93■□□□□ 0.14
TNFRSF1A-202ENST00000366159 SCFD2Q8WU76 684 aa15.93■□□□□ 0.14
TNFRSF1A-202ENST00000366159 MPHOSPH6Q99547 160 aaKnown RBP15.93■□□□□ 0.14
TNFRSF1A-202ENST00000366159 AMNQ9BXJ7 453 aa15.93■□□□□ 0.14
TNFRSF1A-202ENST00000366159 CDH23Q9H251 3354 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms