RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 ERVFC1P60507 584 aa4□□□□□ -1.77
RNU6-428P-201ENST00000362942 SUMO1P63165 101 aaKnown RBP4□□□□□ -1.77
RNU6-428P-201ENST00000362942 RSPO2Q6UXX9 243 aaPredicted RBP4□□□□□ -1.77
RNU6-428P-201ENST00000362942 NOP9Q86U38 636 aaKnown RBP4□□□□□ -1.77
RNU6-428P-201ENST00000362942 NLRX1Q86UT6 975 aa4□□□□□ -1.77
RNU6-428P-201ENST00000362942 PPIL6Q8IXY8 311 aa4□□□□□ -1.77
RNU6-428P-201ENST00000362942 TMEM52Q8NDY8 209 aa4□□□□□ -1.77
RNU6-428P-201ENST00000362942 USP33Q8TEY7 942 aa4□□□□□ -1.77
RNU6-428P-201ENST00000362942 INTS4Q96HW7 963 aaKnown RBP4□□□□□ -1.77
RNU6-428P-201ENST00000362942 JMJD8Q96S16 334 aa4□□□□□ -1.77
RNU6-428P-201ENST00000362942 DNAJC7Q99615 494 aa4□□□□□ -1.77
RNU6-428P-201ENST00000362942 ZFYVE21Q9BQ24 234 aa4□□□□□ -1.77
RNU6-428P-201ENST00000362942 C19orf44Q9H6X5 657 aa4□□□□□ -1.77
RNU6-428P-201ENST00000362942 GPRC5CQ9NQ84 441 aa4□□□□□ -1.77
RNU6-428P-201ENST00000362942 PDLIM7Q9NR12 457 aa4□□□□□ -1.77
RNU6-428P-201ENST00000362942 EBF1Q9UH73 591 aa4□□□□□ -1.77
RNU6-428P-201ENST00000362942 YBX2Q9Y2T7 364 aaKnown RBP4□□□□□ -1.77
RNU6-428P-201ENST00000362942 TRBV23-1A0A0A0MS06 115 aa3.99□□□□□ -1.77
RNU6-428P-201ENST00000362942 FAM221BA6H8Z2 402 aa3.99□□□□□ -1.77
RNU6-428P-201ENST00000362942 OR14I1A6ND48 311 aa3.99□□□□□ -1.77
RNU6-428P-201ENST00000362942 TBX1O43435 398 aa3.99□□□□□ -1.77
RNU6-428P-201ENST00000362942 LTBRP36941 435 aa3.99□□□□□ -1.77
RNU6-428P-201ENST00000362942 RPL11P62913 178 aaKnown RBP3.99□□□□□ -1.77
RNU6-428P-201ENST00000362942 NR1I3Q14994 352 aa3.99□□□□□ -1.77
RNU6-428P-201ENST00000362942 TESK1Q15569 626 aa3.99□□□□□ -1.77
RNU6-428P-201ENST00000362942 C2orf27AQ580R0 203 aa3.99□□□□□ -1.77
RNU6-428P-201ENST00000362942 CPNE8Q86YQ8 564 aa3.99□□□□□ -1.77
RNU6-428P-201ENST00000362942 TMEM145Q8NBT3 493 aa3.99□□□□□ -1.77
RNU6-428P-201ENST00000362942 NPLOC4Q8TAT6 608 aa3.99□□□□□ -1.77
RNU6-428P-201ENST00000362942 DCAF4Q8WV16 495 aa3.99□□□□□ -1.77
RNU6-428P-201ENST00000362942 DHRS4Q9BTZ2 278 aa3.99□□□□□ -1.77
RNU6-428P-201ENST00000362942 RNF32Q9H0A6 362 aa3.99□□□□□ -1.77
RNU6-428P-201ENST00000362942 ARHGEF4Q9NR80 690 aa3.99□□□□□ -1.77
RNU6-428P-201ENST00000362942 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.99□□□□□ -1.77
RNU6-428P-201ENST00000362942 IMPACTQ9P2X3 320 aa3.99□□□□□ -1.77
RNU6-428P-201ENST00000362942 NUDT5Q9UKK9 219 aa3.99□□□□□ -1.77
RNU6-428P-201ENST00000362942 TIMM13Q9Y5L4 95 aaPredicted RBP3.99□□□□□ -1.77
RNU6-428P-201ENST00000362942 C7orf72A4D263 438 aa3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 LRRC10BA6NIK2 292 aa3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 HRKO00198 91 aa3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 AQP7O14520 342 aa3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 TRHRP34981 398 aaPredicted RBP3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 TAF7LQ5H9L4 462 aa3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 SLC35F1Q5T1Q4 408 aa3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 ADGRF1Q5T601 910 aa3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 FYB2Q5VWT5 728 aa3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 BICRALQ6AI39 1079 aa3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 USP53Q70EK8 1073 aa3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 MAMDC2Q7Z304 686 aaPredicted RBP3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 SIRT2Q8IXJ6 389 aa3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 LZTR1Q8N653 840 aa3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 KREMEN2Q8NCW0 462 aa3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 FRS2Q8WU20 508 aa3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 CHAMP1Q96JM3 812 aa3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 LGR4Q9BXB1 951 aa3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 EPB41L4BQ9H329 900 aa3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 SP110Q9HB58 689 aa3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 GPR27Q9NS67 375 aa3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 DBR1Q9UK59 544 aaKnown RBP3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 COA3Q9Y2R0 106 aaPredicted RBP3.98□□□□□ -1.77
RNU6-428P-201ENST00000362942 SRGAP3O43295 1099 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 ADCY3O60266 1144 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 DLX3O60479 287 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 DIAPH1O60610 1272 aaKnown RBP3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 EFCAB14O75071 495 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 CAPNS1P04632 268 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 CYBBP04839 570 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 FAM153BP0C7A2 387 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 GRIA2P42262 883 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 ERVFRD-1P60508 538 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 GABREP78334 506 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 MVKQ03426 396 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 LSAMPQ13449 338 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 CHRNA2Q15822 529 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 MLANAQ16655 118 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 PRSS53Q2L4Q9 553 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 TIGD5Q53EQ6 642 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 MROH9Q5TGP6 573 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 PAQR3Q6TCH7 311 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 IFNL3Q8IZI9 196 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 SYNPOQ8N3V7 929 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 JMYQ8N9B5 988 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 NETO2Q8NC67 525 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 FBXO15Q8NCQ5 510 aaPredicted RBP3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 PTPRN2Q92932 1015 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 SLC38A3Q99624 504 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 PLCD4Q9BRC7 762 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 ALG1Q9BT22 464 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 DCP1AQ9NPI6 582 aaPredicted RBP3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 RNF114Q9Y508 228 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 NPFFR2Q9Y5X5 522 aa3.97□□□□□ -1.77
RNU6-428P-201ENST00000362942 NOTOA8MTQ0 251 aa3.96□□□□□ -1.78
RNU6-428P-201ENST00000362942 H7BY64 318 aa3.96□□□□□ -1.78
RNU6-428P-201ENST00000362942 MAFKO60675 156 aa3.96□□□□□ -1.78
RNU6-428P-201ENST00000362942 PEX10O60683 326 aa3.96□□□□□ -1.78
RNU6-428P-201ENST00000362942 FARP2O94887 1054 aaPredicted RBP3.96□□□□□ -1.78
RNU6-428P-201ENST00000362942 CLSTN1O94985 981 aa3.96□□□□□ -1.78
RNU6-428P-201ENST00000362942 ZBTB7AO95365 584 aa3.96□□□□□ -1.78
RNU6-428P-201ENST00000362942 TXKP42681 527 aa3.96□□□□□ -1.78
RNU6-428P-201ENST00000362942 RAB3GAP1Q15042 981 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms