RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 GGCXP38435 758 aa11.84□□□□□ -0.51
SMC3-201ENST00000361804 USP14P54578 494 aa11.84□□□□□ -0.51
SMC3-201ENST00000361804 ASIC1P78348 528 aa11.84□□□□□ -0.51
SMC3-201ENST00000361804 PDE4DQ08499 809 aa11.84□□□□□ -0.51
SMC3-201ENST00000361804 LRRC31Q6UY01 552 aa11.84□□□□□ -0.51
SMC3-201ENST00000361804 PLCD3Q8N3E9 789 aa11.84□□□□□ -0.51
SMC3-201ENST00000361804 CCDC148Q8NFR7 591 aa11.84□□□□□ -0.51
SMC3-201ENST00000361804 SH3RF3Q8TEJ3 882 aaPredicted RBP11.84□□□□□ -0.51
SMC3-201ENST00000361804 SLX4Q8IY92 1834 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 IDEP14735 1019 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 MTIF2P46199 727 aaKnown RBP11.83□□□□□ -0.52
SMC3-201ENST00000361804 UBE4AQ14139 1066 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 HSP90B2PQ58FF3 399 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 GOLGA5Q8TBA6 731 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 DNAJC7Q99615 494 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 TMEM260Q9NX78 707 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 MAD2L2Q9UI95 211 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 PCDHA4Q9UN74 947 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 H7C1D1 291 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 CCNT1O60563 726 aaKnown RBP11.83□□□□□ -0.52
SMC3-201ENST00000361804 MOCS3O95396 460 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 BMP15O95972 392 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 DDR1Q08345 913 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 MUM1L1Q5H9M0 696 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 ROBO3Q96MS0 1386 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 CALM1P0DP23 149 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 CALM2P0DP24 149 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 CALM3P0DP25 149 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 LRRC41Q15345 812 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 ENOX2Q16206 610 aaKnown RBP11.83□□□□□ -0.52
SMC3-201ENST00000361804 PTPROQ16827 1216 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 USP17L2Q6R6M4 530 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 LEKR1Q6ZMV7 388 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 SRLQ86TD4 932 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 CLEC10AQ8IUN9 316 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 MAPKAPK5Q8IW41 473 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 CRNKL1Q9BZJ0 848 aaKnown RBP11.83□□□□□ -0.52
SMC3-201ENST00000361804 DMGDHQ9UI17 866 aaKnown RBP11.83□□□□□ -0.52
SMC3-201ENST00000361804 CAPN11Q9UMQ6 739 aa11.83□□□□□ -0.52
SMC3-201ENST00000361804 SPAG1Q07617 926 aa11.82□□□□□ -0.52
SMC3-201ENST00000361804 NFRKBQ6P4R8 1299 aa11.82□□□□□ -0.52
SMC3-201ENST00000361804 DNAAF5Q86Y56 855 aa11.82□□□□□ -0.52
SMC3-201ENST00000361804 SALL4Q9UJQ4 1053 aa11.82□□□□□ -0.52
SMC3-201ENST00000361804 HPCAL4Q9UM19 191 aa11.82□□□□□ -0.52
SMC3-201ENST00000361804 ZC3H4Q9UPT8 1303 aaKnown RBP11.82□□□□□ -0.52
SMC3-201ENST00000361804 LONP1P36776 959 aaKnown RBP11.82□□□□□ -0.52
SMC3-201ENST00000361804 CCDC96Q2M329 555 aa11.82□□□□□ -0.52
SMC3-201ENST00000361804 MIIPQ5JXC2 388 aa11.82□□□□□ -0.52
SMC3-201ENST00000361804 TGFBRAP1Q8WUH2 860 aa11.82□□□□□ -0.52
SMC3-201ENST00000361804 MTA3Q9BTC8 594 aa11.82□□□□□ -0.52
SMC3-201ENST00000361804 NOC4LQ9BVI4 516 aaKnown RBP11.82□□□□□ -0.52
SMC3-201ENST00000361804 UBA5Q9GZZ9 404 aa11.82□□□□□ -0.52
SMC3-201ENST00000361804 MAGEC2Q9UBF1 373 aaPredicted RBP11.82□□□□□ -0.52
SMC3-201ENST00000361804 COL4A5P29400 1685 aa11.82□□□□□ -0.52
SMC3-201ENST00000361804 MYH7BA7E2Y1 1941 aa11.82□□□□□ -0.52
SMC3-201ENST00000361804 PSMD14O00487 310 aa11.82□□□□□ -0.52
SMC3-201ENST00000361804 EIF3JO75822 258 aaKnown RBP11.82□□□□□ -0.52
SMC3-201ENST00000361804 PPP2R5BQ15173 497 aa11.82□□□□□ -0.52
SMC3-201ENST00000361804 C2CD5Q86YS7 1000 aa11.82□□□□□ -0.52
SMC3-201ENST00000361804 TTYH3Q9C0H2 523 aa11.82□□□□□ -0.52
SMC3-201ENST00000361804 MKNK2Q9HBH9 465 aa11.82□□□□□ -0.52
SMC3-201ENST00000361804 EXOC1Q9NV70 894 aa11.82□□□□□ -0.52
SMC3-201ENST00000361804 BIN2Q9UBW5 565 aaPredicted RBP11.82□□□□□ -0.52
SMC3-201ENST00000361804 DNAH12Q6ZR08 3092 aa11.82□□□□□ -0.52
SMC3-201ENST00000361804 KIF13BQ9NQT8 1826 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 PSMA7O14818 248 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 GNPATO15228 680 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 GYS1P13807 737 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 RNASE9P60153 205 aaKnown RBP11.81□□□□□ -0.52
SMC3-201ENST00000361804 TSR1Q2NL82 804 aaKnown RBP11.81□□□□□ -0.52
SMC3-201ENST00000361804 CABP7Q86V35 215 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 KIAA0895Q8NCT3 520 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 GIMAP8Q8ND71 665 aaPredicted RBP11.81□□□□□ -0.52
SMC3-201ENST00000361804 RMND1Q9NWS8 449 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 RGPD3A6NKT7 1758 aaPredicted RBP11.81□□□□□ -0.52
SMC3-201ENST00000361804 RGPD4Q7Z3J3 1758 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 FLT1P17948 1338 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 AGPSO00116 658 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 BUB1O43683 1085 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 SLURP2P0DP57 97 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 HIBADHP31937 336 aaKnown RBP11.81□□□□□ -0.52
SMC3-201ENST00000361804 DZIP1Q86YF9 867 aaKnown RBP11.81□□□□□ -0.52
SMC3-201ENST00000361804 LRRC1Q9BTT6 524 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 SEMA6BQ9H3T3 888 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 HAUS4Q9H6D7 363 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 ZSCAN5CA6NGD5 496 aaPredicted RBP11.81□□□□□ -0.52
SMC3-201ENST00000361804 STXBP3O00186 592 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 ORC4O43929 436 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 SRGNP10124 158 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 TXKP42681 527 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 EIF6P56537 245 aaKnown RBP11.81□□□□□ -0.52
SMC3-201ENST00000361804 POTEDQ86YR6 584 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 CERS3Q8IU89 383 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 MS4A14Q96JA4 679 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 NUDT12Q9BQG2 462 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 SELENOOQ9BVL4 669 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 KBTBD4Q9NVX7 518 aa11.81□□□□□ -0.52
SMC3-201ENST00000361804 KLRG2A4D1S0 409 aaPredicted RBP11.8□□□□□ -0.52
SMC3-201ENST00000361804 POTEB2H3BUK9 544 aa11.8□□□□□ -0.52
SMC3-201ENST00000361804 PRR5LQ6MZQ0 368 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms