RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 GOLGA8DPQ0D2H9 430 aa11.97□□□□□ -0.49
CLIP1-203ENST00000361654 DNAJC21Q5F1R6 531 aaKnown RBP11.97□□□□□ -0.49
CLIP1-203ENST00000361654 FAM26FQ5R3K3 315 aa11.97□□□□□ -0.49
CLIP1-203ENST00000361654 ANKRD20A3Q5VUR7 823 aa11.97□□□□□ -0.49
CLIP1-203ENST00000361654 UBN1Q9NPG3 1134 aa11.97□□□□□ -0.49
CLIP1-203ENST00000361654 FAM207AQ9NSI2 230 aaPredicted RBP11.97□□□□□ -0.49
CLIP1-203ENST00000361654 ASNSP08243 561 aa11.97□□□□□ -0.49
CLIP1-203ENST00000361654 PPARGP37231 505 aaPredicted RBP11.97□□□□□ -0.49
CLIP1-203ENST00000361654 SEPT6Q14141 434 aa11.97□□□□□ -0.49
CLIP1-203ENST00000361654 DSTYKQ6XUX3 929 aa11.97□□□□□ -0.49
CLIP1-203ENST00000361654 CEP170P1Q96L14 293 aa11.97□□□□□ -0.49
CLIP1-203ENST00000361654 EIF3CLB5ME19 914 aaKnown RBP11.97□□□□□ -0.49
CLIP1-203ENST00000361654 BBOF1Q8ND07 529 aa11.97□□□□□ -0.49
CLIP1-203ENST00000361654 ACCSQ96QU6 501 aa11.97□□□□□ -0.49
CLIP1-203ENST00000361654 EIF3CQ99613 913 aaKnown RBP11.97□□□□□ -0.49
CLIP1-203ENST00000361654 RNF181Q9P0P0 153 aa11.97□□□□□ -0.49
CLIP1-203ENST00000361654 POLIQ9UNA4 740 aa11.97□□□□□ -0.49
CLIP1-203ENST00000361654 ZFYVE16Q7Z3T8 1539 aa11.97□□□□□ -0.49
CLIP1-203ENST00000361654 LAD1O00515 517 aa11.97□□□□□ -0.49
CLIP1-203ENST00000361654 MED7O43513 233 aa11.97□□□□□ -0.49
CLIP1-203ENST00000361654 EPHB1P54762 984 aa11.97□□□□□ -0.49
CLIP1-203ENST00000361654 RBM6P78332 1123 aaKnown RBP11.97□□□□□ -0.49
CLIP1-203ENST00000361654 ADALQ6DHV7 355 aa11.97□□□□□ -0.49
CLIP1-203ENST00000361654 NOSTRINQ8IVI9 506 aa11.97□□□□□ -0.49
CLIP1-203ENST00000361654 SIX6OS1Q8N1H7 587 aa11.97□□□□□ -0.49
CLIP1-203ENST00000361654 PRPF38AQ8NAV1 312 aaKnown RBP11.97□□□□□ -0.49
CLIP1-203ENST00000361654 EXOC4Q96A65 974 aa11.97□□□□□ -0.49
CLIP1-203ENST00000361654 SLC38A10Q9HBR0 1119 aa11.97□□□□□ -0.49
CLIP1-203ENST00000361654 NEO1Q92859 1461 aa11.96□□□□□ -0.49
CLIP1-203ENST00000361654 RLBP1P12271 317 aa11.96□□□□□ -0.49
CLIP1-203ENST00000361654 BFSP1Q12934 665 aa11.96□□□□□ -0.49
CLIP1-203ENST00000361654 IQCB1Q15051 598 aa11.96□□□□□ -0.49
CLIP1-203ENST00000361654 THEM5Q8N1Q8 247 aa11.96□□□□□ -0.49
CLIP1-203ENST00000361654 BLZF1Q9H2G9 400 aa11.96□□□□□ -0.49
CLIP1-203ENST00000361654 PIDD1Q9HB75 910 aa11.96□□□□□ -0.49
CLIP1-203ENST00000361654 HOXC10Q9NYD6 342 aa11.96□□□□□ -0.49
CLIP1-203ENST00000361654 PHLPP2Q6ZVD8 1323 aa11.96□□□□□ -0.49
CLIP1-203ENST00000361654 KLHL7Q8IXQ5 586 aa11.96□□□□□ -0.49
CLIP1-203ENST00000361654 PSPC1Q8WXF1 523 aaKnown RBP11.96□□□□□ -0.49
CLIP1-203ENST00000361654 CCDC51Q96ER9 411 aa11.96□□□□□ -0.49
CLIP1-203ENST00000361654 IFIH1Q9BYX4 1025 aaKnown RBP11.96□□□□□ -0.49
CLIP1-203ENST00000361654 GRIN3BO60391 1043 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 CIAO1O76071 339 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 ZNF131P52739 623 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 MAP3K21Q5TCX8 1036 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 SYDE2Q5VT97 1194 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 NUDT18Q6ZVK8 323 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 VSIG1Q86XK7 387 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 GIMAP8Q8ND71 665 aaPredicted RBP11.96□□□□□ -0.5
CLIP1-203ENST00000361654 TM6SF1Q9BZW5 370 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 SPON1Q9HCB6 807 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 ASAP1Q9ULH1 1129 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 PCDHB4Q9Y5E5 795 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 ERVV-1B6SEH8 477 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 H7C0C1 242 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 GDF11O95390 407 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 ERCC3P19447 782 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 ATP5OP48047 213 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 ATP11AP98196 1134 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 ADAM9Q13443 819 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 GRAPQ13588 217 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 GDAP1Q8TB36 358 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 GRAPLQ8TC17 118 aaPredicted RBP11.96□□□□□ -0.5
CLIP1-203ENST00000361654 HDAC11Q96DB2 347 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 RILPQ96NA2 401 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 ZNF341Q9BYN7 854 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 GREM2Q9H772 168 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 ZBTB1Q9Y2K1 713 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 INSRP06213 1382 aa11.96□□□□□ -0.5
CLIP1-203ENST00000361654 MED23Q9ULK4 1368 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 PPFIA4O75335 1185 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 HPDP32754 393 aaPredicted RBP11.95□□□□□ -0.5
CLIP1-203ENST00000361654 ARL4AP40617 200 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 NT5C2P49902 561 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 CYP4A11Q02928 519 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 TMTC4Q5T4D3 741 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 APOBEC3FQ8IUX4 373 aaKnown RBP11.95□□□□□ -0.5
CLIP1-203ENST00000361654 SHANK2Q9UPX8 1470 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 THAP12O43422 761 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 LONP1P36776 959 aaKnown RBP11.95□□□□□ -0.5
CLIP1-203ENST00000361654 TCP11Q8WWU5 503 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 TMEM206Q9H813 350 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 ZMYM6O95789 1325 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 ABCB4P21439 1286 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 NFX1Q12986 1120 aaKnown RBP11.95□□□□□ -0.5
CLIP1-203ENST00000361654 URGCPQ8TCY9 931 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 ATP6V1E2Q96A05 226 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 LBHD1Q9BQE6 289 aaPredicted RBP11.95□□□□□ -0.5
CLIP1-203ENST00000361654 TYW1Q9NV66 732 aaKnown RBP11.95□□□□□ -0.5
CLIP1-203ENST00000361654 VPS18Q9P253 973 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 LTKP29376 864 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 TTC30AQ86WT1 665 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 HVCN1Q96D96 273 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 FAM167AQ96KS9 214 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 CUEDC2Q9H467 287 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 VCX3AQ9NNX9 186 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 NDUFB9Q9Y6M9 179 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 TROVE2P10155 538 aaKnown RBP eCLIP11.95□□□□□ -0.5
CLIP1-203ENST00000361654 ADCY8P40145 1251 aa11.95□□□□□ -0.5
CLIP1-203ENST00000361654 LMNB2Q03252 620 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms