RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 CD209Q9NNX6 404 aa20.43■□□□□ 0.86
CLIP2-202ENST00000361545 CAPN2P17655 700 aa20.43■□□□□ 0.86
CLIP2-202ENST00000361545 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.43■□□□□ 0.86
CLIP2-202ENST00000361545 TRIM7Q9C029 511 aa20.43■□□□□ 0.86
CLIP2-202ENST00000361545 FAM196BA6NMK8 535 aa20.43■□□□□ 0.86
CLIP2-202ENST00000361545 TUBBP07437 444 aa20.43■□□□□ 0.86
CLIP2-202ENST00000361545 CEP170P1Q96L14 293 aa20.43■□□□□ 0.86
CLIP2-202ENST00000361545 NKIRAS1Q9NYS0 192 aa20.43■□□□□ 0.86
CLIP2-202ENST00000361545 EIF2AK2P19525 551 aaKnown RBP20.42■□□□□ 0.86
CLIP2-202ENST00000361545 HPDP32754 393 aaPredicted RBP20.42■□□□□ 0.86
CLIP2-202ENST00000361545 SLC39A14Q15043 492 aa20.42■□□□□ 0.86
CLIP2-202ENST00000361545 ARFGAP2Q8N6H7 521 aa20.42■□□□□ 0.86
CLIP2-202ENST00000361545 GIMAP7Q8NHV1 300 aa20.42■□□□□ 0.86
CLIP2-202ENST00000361545 HESX1Q9UBX0 185 aa20.42■□□□□ 0.86
CLIP2-202ENST00000361545 NUB1Q9Y5A7 615 aa20.42■□□□□ 0.86
CLIP2-202ENST00000361545 CCND2P30279 289 aa20.42■□□□□ 0.86
CLIP2-202ENST00000361545 TRAPPC10P48553 1259 aa20.42■□□□□ 0.86
CLIP2-202ENST00000361545 OVOS2A0A0G2JMS6 1433 aa20.42■□□□□ 0.86
CLIP2-202ENST00000361545 OVOS2A0A0J9YW53 1432 aa20.42■□□□□ 0.86
CLIP2-202ENST00000361545 OVOS2Q6IE36 1432 aa20.42■□□□□ 0.86
CLIP2-202ENST00000361545 ADRA2BP18089 450 aa20.42■□□□□ 0.86
CLIP2-202ENST00000361545 MIS18BP1Q6P0N0 1132 aa20.42■□□□□ 0.86
CLIP2-202ENST00000361545 STRBPQ96SI9 672 aaKnown RBP20.42■□□□□ 0.86
CLIP2-202ENST00000361545 N4BP1O75113 896 aaKnown RBP20.42■□□□□ 0.86
CLIP2-202ENST00000361545 LRRC41Q15345 812 aa20.42■□□□□ 0.86
CLIP2-202ENST00000361545 CD2APQ9Y5K6 639 aa20.42■□□□□ 0.86
CLIP2-202ENST00000361545 WDR11Q9BZH6 1224 aa20.41■□□□□ 0.86
CLIP2-202ENST00000361545 LAD1O00515 517 aa20.41■□□□□ 0.86
CLIP2-202ENST00000361545 ABI1Q8IZP0 508 aa20.41■□□□□ 0.86
CLIP2-202ENST00000361545 TRIML1Q8N9V2 468 aa20.41■□□□□ 0.86
CLIP2-202ENST00000361545 PI4K2BQ8TCG2 481 aa20.41■□□□□ 0.86
CLIP2-202ENST00000361545 PPP1R16BQ96T49 567 aa20.41■□□□□ 0.86
CLIP2-202ENST00000361545 ALKQ9UM73 1620 aa20.41■□□□□ 0.86
CLIP2-202ENST00000361545 CLUL1Q15846 466 aa20.41■□□□□ 0.86
CLIP2-202ENST00000361545 METTL14Q9HCE5 456 aaKnown RBP20.41■□□□□ 0.86
CLIP2-202ENST00000361545 CLTCL1P53675 1640 aa20.41■□□□□ 0.86
CLIP2-202ENST00000361545 PPARDQ03181 441 aa20.41■□□□□ 0.86
CLIP2-202ENST00000361545 HDXQ7Z353 690 aa20.41■□□□□ 0.86
CLIP2-202ENST00000361545 TICAM2Q86XR7 235 aa20.41■□□□□ 0.86
CLIP2-202ENST00000361545 FTOQ9C0B1 505 aaKnown RBP eCLIP20.41■□□□□ 0.86
CLIP2-202ENST00000361545 CSPG5O95196 566 aa20.4■□□□□ 0.86
CLIP2-202ENST00000361545 PIK3CAP42336 1068 aa20.4■□□□□ 0.86
CLIP2-202ENST00000361545 PDE6CP51160 858 aa20.4■□□□□ 0.86
CLIP2-202ENST00000361545 LACTBP83111 547 aaPredicted RBP20.4■□□□□ 0.86
CLIP2-202ENST00000361545 MAP7D1Q3KQU3 841 aa20.4■□□□□ 0.86
CLIP2-202ENST00000361545 SLC27A3Q5K4L6 730 aa20.4■□□□□ 0.86
CLIP2-202ENST00000361545 PARP2Q9UGN5 583 aa20.4■□□□□ 0.86
CLIP2-202ENST00000361545 PCDHA5Q9Y5H7 936 aa20.4■□□□□ 0.86
CLIP2-202ENST00000361545 CYP2E1P05181 493 aaPredicted RBP20.4■□□□□ 0.86
CLIP2-202ENST00000361545 ASNSP08243 561 aa20.4■□□□□ 0.86
CLIP2-202ENST00000361545 PPP2R5AQ15172 486 aa20.4■□□□□ 0.86
CLIP2-202ENST00000361545 CCDC89Q8N998 374 aa20.4■□□□□ 0.86
CLIP2-202ENST00000361545 RETREG2Q8NC44 543 aa20.4■□□□□ 0.86
CLIP2-202ENST00000361545 AIFM3Q96NN9 605 aa20.4■□□□□ 0.86
CLIP2-202ENST00000361545 DESI2Q9BSY9 194 aa20.4■□□□□ 0.86
CLIP2-202ENST00000361545 CRCPO75575 148 aa20.4■□□□□ 0.86
CLIP2-202ENST00000361545 MMP1P03956 469 aa20.4■□□□□ 0.86
CLIP2-202ENST00000361545 ITIH3Q06033 890 aa20.4■□□□□ 0.86
CLIP2-202ENST00000361545 RSPH3Q86UC2 560 aa20.4■□□□□ 0.86
CLIP2-202ENST00000361545 SH3BP5O60239 455 aa20.4■□□□□ 0.86
CLIP2-202ENST00000361545 GCFC2P16383 781 aaKnown RBP20.4■□□□□ 0.86
CLIP2-202ENST00000361545 IFNAR1P17181 557 aa20.4■□□□□ 0.86
CLIP2-202ENST00000361545 KIF23Q02241 960 aaPredicted RBP20.4■□□□□ 0.86
CLIP2-202ENST00000361545 TMEM179Q6ZVK1 233 aa20.4■□□□□ 0.86
CLIP2-202ENST00000361545 KMT5AQ9NQR1 393 aa20.4■□□□□ 0.86
CLIP2-202ENST00000361545 AMFRQ9UKV5 643 aa20.4■□□□□ 0.86
CLIP2-202ENST00000361545 PPP2R5CQ13362 524 aa20.39■□□□□ 0.86
CLIP2-202ENST00000361545 MTERF2Q49AM1 385 aa20.39■□□□□ 0.86
CLIP2-202ENST00000361545 IFT20Q8IY31 132 aa20.39■□□□□ 0.86
CLIP2-202ENST00000361545 UBN2Q6ZU65 1347 aa20.39■□□□□ 0.86
CLIP2-202ENST00000361545 PSDA5PKW4 1024 aaPredicted RBP20.39■□□□□ 0.85
CLIP2-202ENST00000361545 IFNB1P01574 187 aa20.39■□□□□ 0.85
CLIP2-202ENST00000361545 ALDH3A1P30838 453 aa20.39■□□□□ 0.85
CLIP2-202ENST00000361545 CFAP221Q4G0U5 840 aa20.39■□□□□ 0.85
CLIP2-202ENST00000361545 IQCDQ96DY2 449 aa20.39■□□□□ 0.85
CLIP2-202ENST00000361545 RNF181Q9P0P0 153 aa20.39■□□□□ 0.85
CLIP2-202ENST00000361545 SYNJ2BP-COX16A0A087WUM0 186 aa20.39■□□□□ 0.85
CLIP2-202ENST00000361545 KRT81Q14533 505 aa20.39■□□□□ 0.85
CLIP2-202ENST00000361545 SPATA1Q5VX52 437 aa20.39■□□□□ 0.85
CLIP2-202ENST00000361545 PODNQ7Z5L7 613 aa20.39■□□□□ 0.85
CLIP2-202ENST00000361545 FAM160B2Q86V87 743 aa20.39■□□□□ 0.85
CLIP2-202ENST00000361545 SMYD4Q8IYR2 804 aaPredicted RBP20.39■□□□□ 0.85
CLIP2-202ENST00000361545 COX16Q9P0S2 106 aa20.39■□□□□ 0.85
CLIP2-202ENST00000361545 STAM2O75886 525 aa20.39■□□□□ 0.85
CLIP2-202ENST00000361545 SMC1BQ8NDV3 1235 aa20.39■□□□□ 0.85
CLIP2-202ENST00000361545 ERO1AQ96HE7 468 aa20.39■□□□□ 0.85
CLIP2-202ENST00000361545 NR2F2P24468 414 aa20.38■□□□□ 0.85
CLIP2-202ENST00000361545 LONRF2Q1L5Z9 754 aa20.38■□□□□ 0.85
CLIP2-202ENST00000361545 CCT6BQ92526 530 aa20.38■□□□□ 0.85
CLIP2-202ENST00000361545 CDHR1Q96JP9 859 aa20.38■□□□□ 0.85
CLIP2-202ENST00000361545 DISC1Q9NRI5 854 aa20.38■□□□□ 0.85
CLIP2-202ENST00000361545 CRB1P82279 1406 aa20.38■□□□□ 0.85
CLIP2-202ENST00000361545 TLR3O15455 904 aaKnown RBP20.38■□□□□ 0.85
CLIP2-202ENST00000361545 PLEKHA8P1O95397 391 aa20.38■□□□□ 0.85
CLIP2-202ENST00000361545 U2AF2P26368 475 aaKnown RBP eCLIP20.38■□□□□ 0.85
CLIP2-202ENST00000361545 NFIXQ14938 502 aa20.38■□□□□ 0.85
CLIP2-202ENST00000361545 ZHX2Q9Y6X8 837 aa20.38■□□□□ 0.85
CLIP2-202ENST00000361545 hCG_1984214I3L0E3 225 aa20.38■□□□□ 0.85
CLIP2-202ENST00000361545 PRPF3O43395 683 aaKnown RBP20.38■□□□□ 0.85
CLIP2-202ENST00000361545 BUB1O43683 1085 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms