RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 TXNRD1Q16881 649 aa10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 LRRC47Q8N1G4 583 aaKnown RBP10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 TXLNBQ8N3L3 684 aa10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 C7orf25Q9BPX7 421 aa10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 RIOX1Q9H6W3 641 aa10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 PNMA6FA0A0J9YX94 578 aa10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 PP2D1A8MPX8 630 aa10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 ERLIN1O75477 346 aa10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 GCFC2P16383 781 aaKnown RBP10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 UTP14CQ5TAP6 766 aaKnown RBP10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 APTXQ7Z2E3 356 aaKnown RBP10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 MB21D1Q8N884 522 aa10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 FLAD1Q8NFF5 587 aa10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 LRRC4BQ9NT99 713 aa10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 MRFAP1Q9Y605 127 aa10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 PLIN4Q96Q06 1357 aa10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 TNRC6CQ9HCJ0 1690 aaKnown RBP10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 TADA3O75528 432 aa10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 MAP3K9P80192 1104 aa10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 TBC1D8BQ0IIM8 1120 aa10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 MCTP2Q6DN12 878 aa10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 KIAA1328Q86T90 577 aa10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 IPO4Q8TEX9 1081 aaKnown RBP10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 RABGGTAQ92696 567 aa10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 NAPGQ99747 312 aaPredicted RBP10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 TRIM9Q9C026 710 aa10.41□□□□□ -0.74
GTF3C2-202ENST00000359541 SNED1Q8TER0 1413 aa10.4□□□□□ -0.74
GTF3C2-202ENST00000359541 TUBBP07437 444 aa10.4□□□□□ -0.74
GTF3C2-202ENST00000359541 SNX29Q8TEQ0 813 aa10.4□□□□□ -0.74
GTF3C2-202ENST00000359541 CPVLQ9H3G5 476 aa10.4□□□□□ -0.74
GTF3C2-202ENST00000359541 ATP8B1O43520 1251 aa10.4□□□□□ -0.74
GTF3C2-202ENST00000359541 ZSCAN29Q8IWY8 852 aaPredicted RBP10.4□□□□□ -0.74
GTF3C2-202ENST00000359541 MTRQ99707 1265 aa10.4□□□□□ -0.74
GTF3C2-202ENST00000359541 TUBGCP2Q9BSJ2 902 aa10.4□□□□□ -0.74
GTF3C2-202ENST00000359541 NOC4LQ9BVI4 516 aaKnown RBP10.4□□□□□ -0.74
GTF3C2-202ENST00000359541 GBP3Q9H0R5 595 aa10.4□□□□□ -0.74
GTF3C2-202ENST00000359541 ZNF219Q9P2Y4 722 aaPredicted RBP10.4□□□□□ -0.74
GTF3C2-202ENST00000359541 KDM3AQ9Y4C1 1321 aa10.4□□□□□ -0.74
GTF3C2-202ENST00000359541 PVALEFA0A1B0GWK0 134 aa10.4□□□□□ -0.75
GTF3C2-202ENST00000359541 POLRMTO00411 1230 aaKnown RBP10.4□□□□□ -0.75
GTF3C2-202ENST00000359541 ONECUT3O60422 494 aaPredicted RBP10.4□□□□□ -0.75
GTF3C2-202ENST00000359541 IDEP14735 1019 aa10.4□□□□□ -0.75
GTF3C2-202ENST00000359541 FXR1P51114 621 aaKnown RBP eCLIP10.4□□□□□ -0.75
GTF3C2-202ENST00000359541 EIF6P56537 245 aaKnown RBP10.4□□□□□ -0.75
GTF3C2-202ENST00000359541 RAD9BQ6WBX8 426 aa10.4□□□□□ -0.75
GTF3C2-202ENST00000359541 KRT27Q7Z3Y8 459 aa10.4□□□□□ -0.75
GTF3C2-202ENST00000359541 LARP4BQ92615 738 aaKnown RBP10.4□□□□□ -0.75
GTF3C2-202ENST00000359541 WDR24Q96S15 920 aa10.4□□□□□ -0.75
GTF3C2-202ENST00000359541 NT5C3AQ9H0P0 336 aa10.4□□□□□ -0.75
GTF3C2-202ENST00000359541 DHX36Q9H2U1 1008 aaKnown RBP10.4□□□□□ -0.75
GTF3C2-202ENST00000359541 HAUS4Q9H6D7 363 aa10.4□□□□□ -0.75
GTF3C2-202ENST00000359541 ARFGAP3Q9NP61 516 aa10.4□□□□□ -0.75
GTF3C2-202ENST00000359541 CDC23Q9UJX2 597 aa10.4□□□□□ -0.75
GTF3C2-202ENST00000359541 KRT86O43790 486 aa10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 COBLO75128 1261 aa10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 FXR2P51116 673 aaKnown RBP eCLIP10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 RBM5P52756 815 aaKnown RBP eCLIP10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 CHMP4BP1P59074 171 aa10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 PDIA5Q14554 519 aa10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 NAALADL2Q58DX5 795 aa10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 HHIPL2Q6UWX4 724 aa10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 EPN1Q9Y6I3 576 aaPredicted RBP10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 TRIM49BA6NDI0 452 aa10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 AKR1B1P15121 316 aa10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 H2AFXP16104 143 aaPredicted RBP10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 ZNF543Q08ER8 600 aa10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 MTF1Q14872 753 aa10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 SEPT2Q15019 361 aa10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 SPA17Q15506 151 aa10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 CNOT6LQ96LI5 555 aaKnown RBP10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 RIC8AQ9NPQ8 531 aa10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 PSMD2Q13200 908 aa10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 WHAMMP3Q1A5X7 153 aa10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 UNC13DQ70J99 1090 aa10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 SRGAP1Q7Z6B7 1085 aa10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 POTEDQ86YR6 584 aa10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 COA7Q96BR5 231 aa10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 QTRT2Q9H974 415 aaKnown RBP10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 MRPL44Q9H9J2 332 aaKnown RBP10.39□□□□□ -0.75
GTF3C2-202ENST00000359541 LY75O60449 1722 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 CTAGE15A4D2H0 777 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 CTAGE8P0CG41 777 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 CLCN6P51797 869 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 CCDC70Q6NSX1 233 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 ZNF771Q7L3S4 317 aaPredicted RBP10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 CTAGE6Q86UF2 777 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 CCDC84Q86UT8 332 aaPredicted RBP10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 CTAGE4Q8IX94 777 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 SLF1Q9BQI6 1058 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 DDX25Q9UHL0 483 aaKnown RBP10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 TRIM37O94972 964 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 FECHP22830 423 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 DDR1Q08345 913 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 TRAF1Q13077 416 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 IKQ13123 557 aaPredicted RBP10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 PODNQ7Z5L7 613 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 DEF6Q9H4E7 631 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 PSTPIP2Q9H939 334 aa10.38□□□□□ -0.75
GTF3C2-202ENST00000359541 CAPN11Q9UMQ6 739 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms