RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 USP17L20D6RJB6 530 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 ZNF18P17022 549 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 KCNJ6P48051 423 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 PPP4CP60510 307 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 CYP4A11Q02928 519 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 USP17L24Q0WX57 530 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 GPATCH4Q5T3I0 446 aaKnown RBP12.44□□□□□ -0.42
SSU72-202ENST00000359060 RBM26Q5T8P6 1007 aaKnown RBP12.44□□□□□ -0.42
SSU72-202ENST00000359060 TMED8Q6PL24 325 aaPredicted RBP12.44□□□□□ -0.42
SSU72-202ENST00000359060 USP17L6PQ6QN14 398 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 REXO1L1PQ8IX06 675 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 MYOCDQ8IZQ8 938 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 MB21D1Q8N884 522 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 CEP89Q96ST8 783 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 LAMB4A4D0S4 1761 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 FAM170AA1A519 330 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 USP17L10C9JJH3 530 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 MAP9Q49MG5 647 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 FAM26FQ5R3K3 315 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 ELOA2Q8IYF1 753 aaPredicted RBP12.44□□□□□ -0.42
SSU72-202ENST00000359060 GDAP1L1Q96MZ0 367 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 SPZ1Q9BXG8 430 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 INTS13Q9NVM9 706 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 SPEF2Q9C093 1822 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 GPR75-ASB3A0A0A6YYF3 556 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 NDUFA10O95299 355 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 MAGEA1P43355 309 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 CKAP4Q07065 602 aaKnown RBP12.44□□□□□ -0.42
SSU72-202ENST00000359060 PLS1Q14651 629 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 LEKR1Q6ZMV7 388 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 C16orf86Q6ZW13 317 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 CHP1Q99653 195 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 CYTH3O43739 400 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 GYS1P13807 737 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 GJA10Q969M2 543 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 RTFDC1Q9BY42 306 aaPredicted RBP12.44□□□□□ -0.42
SSU72-202ENST00000359060 PANK4Q9NVE7 773 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 MTMR4Q9NYA4 1195 aa12.44□□□□□ -0.42
SSU72-202ENST00000359060 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.44□□□□□ -0.42
SSU72-202ENST00000359060 GYPCP04921 128 aa12.43□□□□□ -0.42
SSU72-202ENST00000359060 CCDC84Q86UT8 332 aaPredicted RBP12.43□□□□□ -0.42
SSU72-202ENST00000359060 IFIH1Q9BYX4 1025 aaKnown RBP12.43□□□□□ -0.42
SSU72-202ENST00000359060 MAGEF1Q9HAY2 307 aa12.43□□□□□ -0.42
SSU72-202ENST00000359060 DDX41Q9UJV9 622 aaKnown RBP12.43□□□□□ -0.42
SSU72-202ENST00000359060 MYO6Q9UM54 1294 aa12.43□□□□□ -0.42
SSU72-202ENST00000359060 CRYBG1Q9Y4K1 1723 aa12.43□□□□□ -0.42
SSU72-202ENST00000359060 PNMA6FA0A0J9YX94 578 aa12.43□□□□□ -0.42
SSU72-202ENST00000359060 PALM3A6NDB9 673 aaPredicted RBP12.43□□□□□ -0.42
SSU72-202ENST00000359060 LGALS16A8MUM7 142 aa12.43□□□□□ -0.42
SSU72-202ENST00000359060 STK4Q13043 487 aa12.43□□□□□ -0.42
SSU72-202ENST00000359060 SRGAP1Q7Z6B7 1085 aa12.43□□□□□ -0.42
SSU72-202ENST00000359060 SYCP3Q8IZU3 236 aa12.43□□□□□ -0.42
SSU72-202ENST00000359060 LRRN4CLQ8ND94 238 aa12.43□□□□□ -0.42
SSU72-202ENST00000359060 SECISBP2LQ93073 1101 aaKnown RBP12.43□□□□□ -0.42
SSU72-202ENST00000359060 PARD6BQ9BYG5 372 aa12.43□□□□□ -0.42
SSU72-202ENST00000359060 TRIM9Q9C026 710 aa12.43□□□□□ -0.42
SSU72-202ENST00000359060 CCSER1Q9C0I3 900 aa12.43□□□□□ -0.42
SSU72-202ENST00000359060 HAUS4Q9H6D7 363 aa12.43□□□□□ -0.42
SSU72-202ENST00000359060 TMCO5BA8MYB1 307 aa12.43□□□□□ -0.42
SSU72-202ENST00000359060 TCP10L2B9ZVM9 353 aa12.43□□□□□ -0.42
SSU72-202ENST00000359060 PPIP5K2O43314 1243 aa12.43□□□□□ -0.42
SSU72-202ENST00000359060 HAUS3Q68CZ6 603 aa12.43□□□□□ -0.42
SSU72-202ENST00000359060 CCDC174Q6PII3 467 aa12.43□□□□□ -0.42
SSU72-202ENST00000359060 ADSSL1Q8N142 457 aa12.43□□□□□ -0.42
SSU72-202ENST00000359060 SMCR8Q8TEV9 937 aaPredicted RBP12.43□□□□□ -0.42
SSU72-202ENST00000359060 THAP9Q9H5L6 903 aa12.43□□□□□ -0.42
SSU72-202ENST00000359060 SWAP70Q9UH65 585 aa12.43□□□□□ -0.42
SSU72-202ENST00000359060 CETN3O15182 167 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 MYL1P05976 194 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 RNASE9P60153 205 aaKnown RBP12.42□□□□□ -0.42
SSU72-202ENST00000359060 NT5DC1Q5TFE4 455 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 ADGRF4Q8IZF3 695 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 CCDC17Q96LX7 622 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 CENPHQ9H3R5 247 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 POLD4Q9HCU8 107 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 DNM3Q9UQ16 869 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 SAR1BQ9Y6B6 198 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 CLRN2A0PK11 232 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 MEIS1O00470 390 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 FAM13AO94988 1023 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 PDHBP11177 359 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 PABPC4Q13310 644 aaKnown RBP eCLIP12.42□□□□□ -0.425e-7■□□□□ 9.3
SSU72-202ENST00000359060 PDXDC2PQ6P474 469 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 RABGGTAQ92696 567 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 DDX12PQ92771 950 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 NT5C3AQ9H0P0 336 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 CRKP46108 304 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 ABCB5Q2M3G0 1257 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 ANKRD40Q6AI12 368 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 VPS36Q86VN1 386 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 FBXO11Q86XK2 927 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 ZMYND12Q9H0C1 365 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 VPS18Q9P253 973 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 LIMA1Q9UHB6 759 aaKnown RBP12.42□□□□□ -0.42
SSU72-202ENST00000359060 ZBTB21Q9ULJ3 1066 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 STRCP1A6NGW2 1772 aa12.42□□□□□ -0.42
SSU72-202ENST00000359060 NPR1P16066 1061 aa12.41□□□□□ -0.42
SSU72-202ENST00000359060 NT5C2P49902 561 aa12.41□□□□□ -0.42
SSU72-202ENST00000359060 TMC4Q7Z404 712 aa12.41□□□□□ -0.42
SSU72-202ENST00000359060 GLT8D2Q9H1C3 349 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms