RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 GPCPD1Q9NPB8 672 aa12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 PICK1Q9NRD5 415 aa12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 PTCH2Q9Y6C5 1203 aa12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 KIAA0100Q14667 2235 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 FRMPD2Q68DX3 1309 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC4-201ENST00000359005 FAM237AA0A1B0GTK4 181 aa12.22□□□□□ -0.45
TRAPPC4-201ENST00000359005 hCG_1642624A0A1W2PR95 340 aa12.22□□□□□ -0.45
TRAPPC4-201ENST00000359005 GDF11O95390 407 aa12.22□□□□□ -0.45
TRAPPC4-201ENST00000359005 BCRP11274 1271 aa12.22□□□□□ -0.45
TRAPPC4-201ENST00000359005 CAP2P40123 477 aa12.22□□□□□ -0.45
TRAPPC4-201ENST00000359005 CCDC173Q0VFZ6 552 aa12.22□□□□□ -0.45
TRAPPC4-201ENST00000359005 SPP2Q13103 211 aa12.22□□□□□ -0.45
TRAPPC4-201ENST00000359005 STX1AQ16623 288 aa12.22□□□□□ -0.45
TRAPPC4-201ENST00000359005 PIK3AP1Q6ZUJ8 805 aa12.22□□□□□ -0.45
TRAPPC4-201ENST00000359005 FAM160B2Q86V87 743 aa12.22□□□□□ -0.45
TRAPPC4-201ENST00000359005 ADGRF4Q8IZF3 695 aa12.22□□□□□ -0.45
TRAPPC4-201ENST00000359005 TRIM47Q96LD4 638 aa12.22□□□□□ -0.45
TRAPPC4-201ENST00000359005 AMNQ9BXJ7 453 aa12.22□□□□□ -0.45
TRAPPC4-201ENST00000359005 RAB34Q9BZG1 259 aa12.22□□□□□ -0.45
TRAPPC4-201ENST00000359005 AS3MTQ9HBK9 375 aa12.22□□□□□ -0.45
TRAPPC4-201ENST00000359005 ZCCHC17Q9NP64 241 aaKnown RBP12.22□□□□□ -0.45
TRAPPC4-201ENST00000359005 ANO10Q9NW15 660 aa12.22□□□□□ -0.45
TRAPPC4-201ENST00000359005 ZBTB21Q9ULJ3 1066 aa12.22□□□□□ -0.45
TRAPPC4-201ENST00000359005 TMX2Q9Y320 296 aa12.22□□□□□ -0.45
TRAPPC4-201ENST00000359005 SIPA1L1O43166 1804 aa12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 CYTH3O43739 400 aa12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 PLA2G6O60733 806 aa12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 ZNF202O95125 648 aa12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 XRCC6P12956 609 aaKnown RBP eCLIP12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 ATP2B1P20020 1258 aa12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 MARCKSP29966 332 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 LONP1P36776 959 aaKnown RBP12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 PRPHP41219 470 aa12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 USP14P54578 494 aa12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 TPM4P67936 248 aa12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 AXDND1Q5T1B0 1012 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 GADL1Q6ZQY3 521 aa12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 FMR1NBQ8N0W7 255 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 ENGASEQ8NFI3 743 aa12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 OXER1Q8TDS5 423 aa12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 LPAR1Q92633 364 aa12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 GPKOWQ92917 476 aaPredicted RBP eCLIP12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 TNFRSF25Q93038 417 aa12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 ARMC5Q96C12 935 aa12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 FTOQ9C0B1 505 aaKnown RBP eCLIP12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 JMJD4Q9H9V9 463 aa12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 RIC8AQ9NPQ8 531 aa12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 KCNH3Q9ULD8 1083 aa12.21□□□□□ -0.45
TRAPPC4-201ENST00000359005 PDE4DIPQ5VU43 2346 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 A0A1B0GVL5 298 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 PEX10O60683 326 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 FOSP01100 380 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 MYCP01106 439 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 FDX1P10109 184 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 PFKFB1P16118 471 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 TOB1P50616 345 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 STAT2P52630 851 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 ATP2C1P98194 919 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 SNW1Q13573 536 aaKnown RBP12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 CAMK4Q16566 473 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 SYDE2Q5VT97 1194 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 POTEEQ6S8J3 1075 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 BTNL9Q6UXG8 535 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 DTHD1Q6ZMT9 781 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 NEK8Q86SG6 692 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 CNNM3Q8NE01 707 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 FAM200AQ8TCP9 573 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 TRIM44Q96DX7 344 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 MTMR8Q96EF0 704 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 AK8Q96MA6 479 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 FEZ1Q99689 392 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 UBA5Q9GZZ9 404 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 EHMT1Q9H9B1 1298 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 DACH1Q9UI36 760 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 FEM1BQ9UK73 627 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 PCDHA6Q9UN73 950 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 PCDHB6Q9Y5E3 794 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 PCDHA8Q9Y5H6 950 aa12.2□□□□□ -0.46
TRAPPC4-201ENST00000359005 GOLGA6L19H0YKK7 550 aa12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 SMC2O95347 1197 aa12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 NDUFB10O96000 172 aa12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 GCFC2P16383 781 aaKnown RBP12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 EN2P19622 333 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 PSMC4P43686 418 aa12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 NDUFA8P51970 172 aa12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 HMGCS2P54868 508 aa12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 TYRO3Q06418 890 aa12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 AP3B2Q13367 1082 aa12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 TMEM266Q2M3C6 531 aa12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 KCTD1Q719H9 257 aa12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 FASTKD5Q7L8L6 764 aaKnown RBP12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 GAS2L3Q86XJ1 694 aa12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 FBXO11Q86XK2 927 aa12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 CEP57L1Q8IYX8 460 aa12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 ZNF280CQ8ND82 737 aa12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 SH3TC2Q8TF17 1288 aa12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 GTPBP4Q9BZE4 634 aaKnown RBP12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 VCPKMTQ9H867 229 aa12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 PSTPIP2Q9H939 334 aa12.19□□□□□ -0.46
TRAPPC4-201ENST00000359005 CCDC39Q9UFE4 941 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms