RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 TYRO3Q06418 890 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 KIF19Q2TAC6 998 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 AARS2Q5JTZ9 985 aaKnown RBP10.63□□□□□ -0.71
CHD3-202ENST00000358181 CREB3L3Q68CJ9 461 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 TRIM67Q6ZTA4 783 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 BCAP29Q9UHQ4 241 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 MKL2Q9ULH7 1088 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 GNAT2P19087 354 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 IL15P40933 162 aaPredicted RBP10.63□□□□□ -0.71
CHD3-202ENST00000358181 BMP2KLQ5H9B9 411 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 CEP85Q6P2H3 762 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 HAUS1Q96CS2 278 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.63□□□□□ -0.716e-7■■■■■ 33.9
CHD3-202ENST00000358181 LSM14BQ9BX40 385 aaKnown RBP10.63□□□□□ -0.71
CHD3-202ENST00000358181 GIMAP4Q9NUV9 329 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 PAXBP1Q9Y5B6 917 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 RNF113AO15541 343 aaKnown RBP10.63□□□□□ -0.71
CHD3-202ENST00000358181 FLOT1O75955 427 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 F13A1P00488 732 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 CMTR1Q8N1G2 835 aaKnown RBP10.63□□□□□ -0.71
CHD3-202ENST00000358181 PIP4K2CQ8TBX8 421 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 RNF139Q8WU17 664 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 USP40Q9NVE5 1235 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 EIF4E1BA6NMX2 242 aaKnown RBP10.63□□□□□ -0.71
CHD3-202ENST00000358181 SETSIPP0DME0 302 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 EEF1DP29692 281 aaKnown RBP10.63□□□□□ -0.71
CHD3-202ENST00000358181 TAF11Q15544 211 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 CAPN11Q9UMQ6 739 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 SF3B3Q15393 1217 aaKnown RBP10.63□□□□□ -0.71
CHD3-202ENST00000358181 VWA3BQ502W6 1294 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 THEMIS2Q5TEJ8 643 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 AFG1LQ8WV93 481 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 TSC1Q92574 1164 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 MAN1C1Q9NR34 630 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 SPATS2LQ9NUQ6 558 aaKnown RBP10.63□□□□□ -0.71
CHD3-202ENST00000358181 GPATCH8Q9UKJ3 1502 aaKnown RBP10.63□□□□□ -0.71
CHD3-202ENST00000358181 PLCH2O75038 1416 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 MAP3K5Q99683 1374 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 CLRN2A0PK11 232 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 PDE1BQ01064 536 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 LVRNQ6Q4G3 990 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 RAPGEF5Q92565 580 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 TBC1D32Q96NH3 1257 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 BLZF1Q9H2G9 400 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 PTPRKQ15262 1439 aa10.63□□□□□ -0.71
CHD3-202ENST00000358181 RSPH10B2B2RC85 870 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 GIGYF1O75420 1035 aaPredicted RBP10.62□□□□□ -0.71
CHD3-202ENST00000358181 ASMTLO95671 621 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 RSPH10BP0C881 870 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 RALGDSQ12967 914 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 TRIM32Q13049 653 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 DACH2Q96NX9 599 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 KIF17Q9P2E2 1029 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 ORC4O43929 436 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 PDE6BP35913 854 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 TJAP1Q5JTD0 557 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 KRT222Q8N1A0 295 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 C17orf53Q8N3J3 647 aaPredicted RBP10.62□□□□□ -0.71
CHD3-202ENST00000358181 NDE1Q9NXR1 346 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 PPARGC1AQ9UBK2 798 aaKnown RBP10.62□□□□□ -0.71
CHD3-202ENST00000358181 PCDHB4Q9Y5E5 795 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 ASXL1Q8IXJ9 1541 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 MAP3K19Q56UN5 1328 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 EEF1GP26641 437 aaKnown RBP10.62□□□□□ -0.71
CHD3-202ENST00000358181 MECOMQ03112 1051 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 TRPC7Q9HCX4 862 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 DENND2AQ9ULE3 1009 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 PPP1R9AQ9ULJ8 1098 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 POC1B-GALNT4F8VUJ3 575 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 LONP1P36776 959 aaKnown RBP10.62□□□□□ -0.71
CHD3-202ENST00000358181 FAM47AQ5JRC9 791 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 DYRK4Q9NR20 520 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 HMG20BQ9P0W2 317 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 A0A1W2PP64 1363 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 ERBB3P21860 1342 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 UBE2HP62256 183 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 ANKRD49Q8WVL7 239 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 A2MP01023 1474 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 CFLARO15519 480 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 POLA2Q14181 598 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 DSTYKQ6XUX3 929 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 CERS3Q8IU89 383 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 CSGALNACT2Q8N6G5 542 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 SELENONQ9NZV5 590 aa10.62□□□□□ -0.71
CHD3-202ENST00000358181 THAP12O43422 761 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 NBNO60934 754 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 IFNA8P32881 189 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 GTF2IP78347 998 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 PEX26Q7Z412 305 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 MCM8Q9UJA3 840 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 ATP8B3O60423 1300 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 MYBP10242 640 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 RASSF2P50749 326 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 KCTD2Q14681 263 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 FAM160B1Q5W0V3 765 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 NLRP9Q7RTR0 991 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 ARHGAP18Q8N392 663 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 CCDC127Q96BQ5 260 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 FAM227BQ96M60 508 aa10.61□□□□□ -0.71
CHD3-202ENST00000358181 GDAP1L1Q96MZ0 367 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms