RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 PPM1EQ8WY54 764 aa10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 ZFP91Q96JP5 570 aaPredicted RBP10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 NACAP1Q9BZK3 213 aa10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 AP5M1Q9H0R1 490 aa10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 TRPV6Q9H1D0 765 aa10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 NKX2-4Q9H2Z4 354 aa10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 PDGFCQ9NRA1 345 aa10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 IL17RBQ9NRM6 502 aa10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 CYP39A1Q9NYL5 469 aa10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 THEGQ9P2T0 379 aa10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 YBX2Q9Y2T7 364 aaKnown RBP10.19□□□□□ -0.78
COL4A3BP-202ENST00000357457 TET1Q8NFU7 2136 aa10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 SCN10AQ9Y5Y9 1956 aa10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 LOC102724159A0A0B4J2E5 919 aa10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 SLC3A2P08195 630 aaKnown RBP10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 ALAS1P13196 640 aa10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 POU3F3P20264 500 aaPredicted RBP10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 COL9A1P20849 921 aa10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 PTGS1P23219 599 aa10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 PPARAQ07869 468 aa10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 PWP2Q15269 919 aaKnown RBP10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 LRRFIP1Q32MZ4 808 aaKnown RBP10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 DUSP28Q4G0W2 176 aa10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 C20orf194Q5TEA3 1177 aa10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 TSHZ3Q63HK5 1081 aa10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 OTOP2Q7RTS6 562 aa10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 GPATCH3Q96I76 525 aa10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 SEC62Q99442 399 aaKnown RBP10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 WNT8AQ9H1J5 351 aa10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 SLC28A3Q9HAS3 691 aa10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 VTA1Q9NP79 307 aa10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 PRR12Q9ULL5 1215 aa10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 PCDHA11Q9Y5I1 949 aa10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 LRRC37A2A6NM11 1700 aa10.18□□□□□ -0.78
COL4A3BP-202ENST00000357457 TRIP12Q14669 1992 aaPredicted RBP10.17□□□□□ -0.78
COL4A3BP-202ENST00000357457 RBM47A0AV96 593 aaKnown RBP10.17□□□□□ -0.78
COL4A3BP-202ENST00000357457 FGRP09769 529 aa10.17□□□□□ -0.78
COL4A3BP-202ENST00000357457 IGFBP4P22692 258 aa10.17□□□□□ -0.78
COL4A3BP-202ENST00000357457 CCL23P55773 120 aa10.17□□□□□ -0.78
COL4A3BP-202ENST00000357457 CCDC85BQ15834 202 aaPredicted RBP10.17□□□□□ -0.78
COL4A3BP-202ENST00000357457 MUM1L1Q5H9M0 696 aa10.17□□□□□ -0.78
COL4A3BP-202ENST00000357457 ZMYM1Q5SVZ6 1142 aa10.17□□□□□ -0.78
COL4A3BP-202ENST00000357457 BTNL9Q6UXG8 535 aa10.17□□□□□ -0.78
COL4A3BP-202ENST00000357457 KIAA1211Q6ZU35 1233 aa10.17□□□□□ -0.78
COL4A3BP-202ENST00000357457 KCTD1Q719H9 257 aa10.17□□□□□ -0.78
COL4A3BP-202ENST00000357457 FBXO16Q8IX29 292 aaPredicted RBP10.17□□□□□ -0.78
COL4A3BP-202ENST00000357457 ADAMTS19Q8TE59 1207 aa10.17□□□□□ -0.78
COL4A3BP-202ENST00000357457 DCBLD2Q96PD2 775 aa10.17□□□□□ -0.78
COL4A3BP-202ENST00000357457 NAPBQ9H115 298 aa10.17□□□□□ -0.78
COL4A3BP-202ENST00000357457 ALDH8A1Q9H2A2 487 aaPredicted RBP10.17□□□□□ -0.78
COL4A3BP-202ENST00000357457 RCAN3Q9UKA8 241 aa10.17□□□□□ -0.78
COL4A3BP-202ENST00000357457 STK24Q9Y6E0 443 aa10.17□□□□□ -0.78
COL4A3BP-202ENST00000357457 SLC4A7Q9Y6M7 1214 aa10.17□□□□□ -0.78
COL4A3BP-202ENST00000357457 DDX49Q9Y6V7 483 aaKnown RBP10.17□□□□□ -0.78
COL4A3BP-202ENST00000357457 SCN5AQ14524 2016 aa10.17□□□□□ -0.78
COL4A3BP-202ENST00000357457 BRWD1Q9NSI6 2320 aa10.17□□□□□ -0.78
COL4A3BP-202ENST00000357457 TTC41PQ6P2S7 1318 aa10.16□□□□□ -0.78
COL4A3BP-202ENST00000357457 FOXP2O15409 715 aa10.16□□□□□ -0.78
COL4A3BP-202ENST00000357457 ICAM1P05362 532 aa10.16□□□□□ -0.78
COL4A3BP-202ENST00000357457 PFKMP08237 780 aa10.16□□□□□ -0.78
COL4A3BP-202ENST00000357457 SUPT20HL2P0C7V6 817 aa10.16□□□□□ -0.78
COL4A3BP-202ENST00000357457 BMP1P13497 986 aa10.16□□□□□ -0.78
COL4A3BP-202ENST00000357457 PSEN1P49768 467 aa10.16□□□□□ -0.78
COL4A3BP-202ENST00000357457 RABGGTBP53611 331 aa10.16□□□□□ -0.78
COL4A3BP-202ENST00000357457 PSMC6P62333 389 aa10.16□□□□□ -0.78
COL4A3BP-202ENST00000357457 EEPD1Q7L9B9 569 aa10.16□□□□□ -0.78
COL4A3BP-202ENST00000357457 PI4K2BQ8TCG2 481 aa10.16□□□□□ -0.78
COL4A3BP-202ENST00000357457 BBXQ8WY36 941 aaPredicted RBP10.16□□□□□ -0.78
COL4A3BP-202ENST00000357457 MS4A3Q96HJ5 214 aa10.16□□□□□ -0.78
COL4A3BP-202ENST00000357457 PURBQ96QR8 312 aaKnown RBP10.16□□□□□ -0.78
COL4A3BP-202ENST00000357457 UHRF1Q96T88 793 aaPredicted RBP10.16□□□□□ -0.78
COL4A3BP-202ENST00000357457 RANBP17Q9H2T7 1088 aaKnown RBP10.16□□□□□ -0.78
COL4A3BP-202ENST00000357457 ANAPC4Q9UJX5 808 aa10.16□□□□□ -0.78
COL4A3BP-202ENST00000357457 ERC2O15083 957 aa10.15□□□□□ -0.78
COL4A3BP-202ENST00000357457 NMT2O60551 498 aa10.15□□□□□ -0.78
COL4A3BP-202ENST00000357457 MYOGP15173 224 aa10.15□□□□□ -0.78
COL4A3BP-202ENST00000357457 ATP2A2P16615 1042 aaKnown RBP10.15□□□□□ -0.78
COL4A3BP-202ENST00000357457 SNAP25P60880 206 aa10.15□□□□□ -0.78
COL4A3BP-202ENST00000357457 PURAQ00577 322 aaKnown RBP10.15□□□□□ -0.78
COL4A3BP-202ENST00000357457 IKQ13123 557 aaPredicted RBP10.15□□□□□ -0.78
COL4A3BP-202ENST00000357457 BAATQ14032 418 aaPredicted RBP10.15□□□□□ -0.78
COL4A3BP-202ENST00000357457 DCAF4Q8WV16 495 aa10.15□□□□□ -0.78
COL4A3BP-202ENST00000357457 SCLYQ96I15 445 aa10.15□□□□□ -0.78
COL4A3BP-202ENST00000357457 WDR11Q9BZH6 1224 aa10.15□□□□□ -0.78
COL4A3BP-202ENST00000357457 INCENPQ9NQS7 918 aa10.15□□□□□ -0.78
COL4A3BP-202ENST00000357457 TRMT13Q9NUP7 481 aaKnown RBP10.15□□□□□ -0.78
COL4A3BP-202ENST00000357457 POLR3EQ9NVU0 708 aa10.15□□□□□ -0.78
COL4A3BP-202ENST00000357457 ADD3Q9UEY8 706 aaKnown RBP10.15□□□□□ -0.78
COL4A3BP-202ENST00000357457 CCPG1Q9ULG6 757 aa10.15□□□□□ -0.78
COL4A3BP-202ENST00000357457 STX8Q9UNK0 236 aa10.15□□□□□ -0.78
COL4A3BP-202ENST00000357457 GTF3C3Q9Y5Q9 886 aa10.15□□□□□ -0.78
COL4A3BP-202ENST00000357457 TNKSO95271 1327 aa10.14□□□□□ -0.79
COL4A3BP-202ENST00000357457 TSPY2A6NKD2 308 aa10.14□□□□□ -0.79
COL4A3BP-202ENST00000357457 ORC4O43929 436 aa10.14□□□□□ -0.79
COL4A3BP-202ENST00000357457 ALDH5A1P51649 535 aaPredicted RBP10.14□□□□□ -0.79
COL4A3BP-202ENST00000357457 CTDSPL2Q05D32 466 aa10.14□□□□□ -0.79
COL4A3BP-202ENST00000357457 TTLL4Q14679 1199 aa10.14□□□□□ -0.79
COL4A3BP-202ENST00000357457 ALX1Q15699 326 aa10.14□□□□□ -0.79
COL4A3BP-202ENST00000357457 TMEM67Q5HYA8 995 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms