RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 NELFCDQ8IXH7 590 aa13.96□□□□□ -0.17
SMC4-202ENST00000357388 GIPC2Q8TF65 315 aa13.96□□□□□ -0.17
SMC4-202ENST00000357388 XAGE2Q96GT9 111 aa13.96□□□□□ -0.17
SMC4-202ENST00000357388 PGRMC1O00264 195 aaKnown RBP13.96□□□□□ -0.17
SMC4-202ENST00000357388 SEC31AO94979 1220 aaKnown RBP13.96□□□□□ -0.17
SMC4-202ENST00000357388 BRD2P25440 801 aaKnown RBP13.96□□□□□ -0.17
SMC4-202ENST00000357388 LONP1P36776 959 aaKnown RBP13.96□□□□□ -0.17
SMC4-202ENST00000357388 IFNAR2P48551 515 aa13.96□□□□□ -0.17
SMC4-202ENST00000357388 BPIFB4P59827 614 aa13.96□□□□□ -0.17
SMC4-202ENST00000357388 ADCY2Q08462 1091 aa13.96□□□□□ -0.17
SMC4-202ENST00000357388 TNNI3KQ59H18 835 aa13.96□□□□□ -0.17
SMC4-202ENST00000357388 FAM133BQ5BKY9 247 aaKnown RBP13.96□□□□□ -0.17
SMC4-202ENST00000357388 C6orf118Q5T5N4 469 aa13.96□□□□□ -0.17
SMC4-202ENST00000357388 EMBQ6PCB8 327 aa13.96□□□□□ -0.17
SMC4-202ENST00000357388 TMCO5AQ8N6Q1 288 aa13.96□□□□□ -0.17
SMC4-202ENST00000357388 ANLNQ9NQW6 1124 aa13.96□□□□□ -0.17
SMC4-202ENST00000357388 FPGT-TNNI3KV9GXZ4 949 aa13.96□□□□□ -0.17
SMC4-202ENST00000357388 ESRRAP11474 423 aaPredicted RBP13.96□□□□□ -0.17
SMC4-202ENST00000357388 YWHAGP61981 247 aaKnown RBP eCLIP13.96□□□□□ -0.171e-117■■■■■ 400.8
SMC4-202ENST00000357388 GALNT17Q6IS24 598 aa13.96□□□□□ -0.17
SMC4-202ENST00000357388 ZNF790Q6PG37 636 aa13.96□□□□□ -0.17
SMC4-202ENST00000357388 SLC35F6Q8N357 371 aa13.96□□□□□ -0.17
SMC4-202ENST00000357388 ARMC2Q8NEN0 867 aa13.96□□□□□ -0.17
SMC4-202ENST00000357388 EYA1Q99502 592 aa13.96□□□□□ -0.17
SMC4-202ENST00000357388 ZNF148Q9UQR1 794 aa13.96□□□□□ -0.17
SMC4-202ENST00000357388 TMEM232C9JQI7 657 aa13.96□□□□□ -0.18
SMC4-202ENST00000357388 GSTA4O15217 222 aa13.96□□□□□ -0.18
SMC4-202ENST00000357388 ABCB4P21439 1286 aa13.96□□□□□ -0.18
SMC4-202ENST00000357388 ECE1P42892 770 aa13.96□□□□□ -0.18
SMC4-202ENST00000357388 MSH2P43246 934 aa13.96□□□□□ -0.18
SMC4-202ENST00000357388 PPARDQ03181 441 aa13.96□□□□□ -0.18
SMC4-202ENST00000357388 CUL1Q13616 776 aa13.96□□□□□ -0.18
SMC4-202ENST00000357388 EP400NLQ6ZTU2 488 aa13.96□□□□□ -0.18
SMC4-202ENST00000357388 FAM81BQ96LP2 452 aa13.96□□□□□ -0.18
SMC4-202ENST00000357388 ATP8A2Q9NTI2 1148 aa13.96□□□□□ -0.18
SMC4-202ENST00000357388 SRGAP2BP0DMP2 458 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 PDE1BQ01064 536 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 BSPRYQ5W0U4 402 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 INSRP06213 1382 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 TADA3O75528 432 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 TNNI1P19237 187 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 PSMD7P51665 324 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 COPB1P53618 953 aaKnown RBP13.95□□□□□ -0.18
SMC4-202ENST00000357388 IRX1P78414 480 aaPredicted RBP13.95□□□□□ -0.18
SMC4-202ENST00000357388 TTC19Q6DKK2 380 aaPredicted RBP13.95□□□□□ -0.18
SMC4-202ENST00000357388 FAM173BQ6P4H8 233 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 CEP70Q8NHQ1 597 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 CUEDC2Q9H467 287 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 NCOA5Q9HCD5 579 aaKnown RBP13.95□□□□□ -0.18
SMC4-202ENST00000357388 KRT82Q9NSB4 513 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 C1orf112Q9NSG2 853 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 HNRNPH2P55795 449 aaKnown RBP13.95□□□□□ -0.18
SMC4-202ENST00000357388 TERF2Q15554 542 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 PIP4K2CQ8TBX8 421 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 MED10Q9BTT4 135 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 BLZF1Q9H2G9 400 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 TMEM60Q9H2L4 133 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 AATFQ9NY61 560 aaKnown RBP eCLIP13.95□□□□□ -0.184e-8■■■■■ 116
SMC4-202ENST00000357388 PYCARDQ9ULZ3 195 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 TNNC2P02585 160 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 IL1RL1Q01638 556 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 E2F4Q16254 413 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 SLFNL1Q499Z3 407 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 A2MP01023 1474 aa13.95□□□□□ -0.18
SMC4-202ENST00000357388 ECEL1O95672 775 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 RAP1GDS1P52306 607 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 ART3Q13508 389 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 KBTBD3Q8NAB2 608 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 NEK9Q8TD19 979 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 TRAIPQ9BWF2 469 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 EPB41L5Q9HCM4 733 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 ZBTB12Q9Y330 459 aaPredicted RBP13.94□□□□□ -0.18
SMC4-202ENST00000357388 TTLL3Q9Y4R7 772 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 POC1B-GALNT4F8VUJ3 575 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 IPO5O00410 1097 aaKnown RBP13.94□□□□□ -0.18
SMC4-202ENST00000357388 GPAA1O43292 621 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 GAS7O60861 476 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 APBA3O96018 575 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 HDAC4P56524 1084 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 ARPP21Q9UBL0 812 aaPredicted RBP13.94□□□□□ -0.18
SMC4-202ENST00000357388 STK17AQ9UEE5 414 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 MRFAP1Q9Y605 127 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 TMOD1P28289 359 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 USH1GQ495M9 461 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 GLE1Q53GS7 698 aaKnown RBP13.94□□□□□ -0.18
SMC4-202ENST00000357388 MAEAQ7L5Y9 396 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 PODNQ7Z5L7 613 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 REXO1Q8N1G1 1221 aaKnown RBP13.94□□□□□ -0.18
SMC4-202ENST00000357388 MAGOHBQ96A72 148 aaKnown RBP13.94□□□□□ -0.18
SMC4-202ENST00000357388 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.94□□□□□ -0.184e-34■■■■■ 131.8
SMC4-202ENST00000357388 TBX22Q9Y458 520 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 CAPN9O14815 690 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 CLCN6P51797 869 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 PLEKHA4Q9H4M7 779 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 MRPL11Q9Y3B7 192 aaKnown RBP13.94□□□□□ -0.18
SMC4-202ENST00000357388 LAMC3Q9Y6N6 1575 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 NOSTRINQ8IVI9 506 aa13.94□□□□□ -0.18
SMC4-202ENST00000357388 SOS2Q07890 1332 aaPredicted RBP13.93□□□□□ -0.18
SMC4-202ENST00000357388 SPDYE16A6NNV3 312 aaPredicted RBP13.93□□□□□ -0.18
SMC4-202ENST00000357388 SPDYE2Q495Y8 402 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms