RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 SCN4AP35499 1836 aa14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 ZC3H4Q9UPT8 1303 aaKnown RBP14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 FMNL1O95466 1100 aaPredicted RBP14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 PARP1P09874 1014 aaKnown RBP14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 VEGFAP15692 232 aaPredicted RBP14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 KIF5BP33176 963 aa14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 GNG11P61952 73 aa14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 GRM4Q14833 912 aa14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 SPECC1LQ69YQ0 1117 aa14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 USP50Q70EL3 339 aaPredicted RBP14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 TRIM22Q8IYM9 498 aa14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 HNRNPLLQ8WVV9 542 aaKnown RBP14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 PARD6BQ9BYG5 372 aa14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 ARFGAP3Q9NP61 516 aa14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 RBM28Q9NW13 759 aaKnown RBP14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 KCNH3Q9ULD8 1083 aa14.29□□□□□ -0.12
RTFDC1-202ENST00000357348 CCDC151A5D8V7 595 aa14.28□□□□□ -0.12
RTFDC1-202ENST00000357348 IQCA1LA6NCM1 817 aa14.28□□□□□ -0.12
RTFDC1-202ENST00000357348 DCAF8L1A6NGE4 600 aa14.28□□□□□ -0.12
RTFDC1-202ENST00000357348 KLRF2D3W0D1 207 aa14.28□□□□□ -0.12
RTFDC1-202ENST00000357348 SLC16A2P36021 539 aa14.28□□□□□ -0.12
RTFDC1-202ENST00000357348 NOVP48745 357 aa14.28□□□□□ -0.12
RTFDC1-202ENST00000357348 FMR1Q06787 632 aaKnown RBP eCLIP14.28□□□□□ -0.12
RTFDC1-202ENST00000357348 DGKZQ13574 1117 aa14.28□□□□□ -0.12
RTFDC1-202ENST00000357348 GNL2Q13823 731 aaKnown RBP14.28□□□□□ -0.12
RTFDC1-202ENST00000357348 BRD3Q15059 726 aa14.28□□□□□ -0.12
RTFDC1-202ENST00000357348 CCDC96Q2M329 555 aa14.28□□□□□ -0.12
RTFDC1-202ENST00000357348 TTBK2Q6IQ55 1244 aa14.28□□□□□ -0.12
RTFDC1-202ENST00000357348 TOGARAM2Q6ZUX3 1019 aa14.28□□□□□ -0.12
RTFDC1-202ENST00000357348 MLKLQ8NB16 471 aa14.28□□□□□ -0.12
RTFDC1-202ENST00000357348 GOLGA1Q92805 767 aa14.28□□□□□ -0.12
RTFDC1-202ENST00000357348 NID2Q14112 1375 aa14.28□□□□□ -0.12
RTFDC1-202ENST00000357348 POLR3GO15318 223 aaPredicted RBP14.27□□□□□ -0.12
RTFDC1-202ENST00000357348 TXLNAP40222 546 aa14.27□□□□□ -0.12
RTFDC1-202ENST00000357348 RCAN1P53805 252 aa14.27□□□□□ -0.12
RTFDC1-202ENST00000357348 AKAP17AQ02040 695 aaKnown RBP14.27□□□□□ -0.12
RTFDC1-202ENST00000357348 GPS2Q13227 327 aa14.27□□□□□ -0.12
RTFDC1-202ENST00000357348 SLC35G1Q2M3R5 365 aa14.27□□□□□ -0.12
RTFDC1-202ENST00000357348 MAP1SQ66K74 1059 aaPredicted RBP14.27□□□□□ -0.12
RTFDC1-202ENST00000357348 SAMD1Q6SPF0 538 aaPredicted RBP14.27□□□□□ -0.12
RTFDC1-202ENST00000357348 IQUBQ8NA54 791 aa14.27□□□□□ -0.12
RTFDC1-202ENST00000357348 CNNM3Q8NE01 707 aa14.27□□□□□ -0.12
RTFDC1-202ENST00000357348 EXOC4Q96A65 974 aa14.27□□□□□ -0.12
RTFDC1-202ENST00000357348 CLIC6Q96NY7 704 aa14.27□□□□□ -0.12
RTFDC1-202ENST00000357348 EPC1Q9H2F5 836 aa14.27□□□□□ -0.12
RTFDC1-202ENST00000357348 NYAP2Q9P242 653 aa14.27□□□□□ -0.12
RTFDC1-202ENST00000357348 MAN1B1Q9UKM7 699 aa14.27□□□□□ -0.12
RTFDC1-202ENST00000357348 SSC5DA1L4H1 1573 aa14.27□□□□□ -0.12
RTFDC1-202ENST00000357348 CNTNAP5Q8WYK1 1306 aa14.27□□□□□ -0.12
RTFDC1-202ENST00000357348 STK36Q9NRP7 1315 aa14.27□□□□□ -0.12
RTFDC1-202ENST00000357348 F5H6K3 240 aa14.27□□□□□ -0.13
RTFDC1-202ENST00000357348 CYTH3O43739 400 aa14.27□□□□□ -0.13
RTFDC1-202ENST00000357348 MAP3K10Q02779 954 aa14.27□□□□□ -0.13
RTFDC1-202ENST00000357348 KLRC3Q07444 240 aa14.27□□□□□ -0.13
RTFDC1-202ENST00000357348 RAD51AP2Q09MP3 1159 aa14.27□□□□□ -0.13
RTFDC1-202ENST00000357348 FUT2Q10981 343 aa14.27□□□□□ -0.13
RTFDC1-202ENST00000357348 MORC3Q14149 939 aa14.27□□□□□ -0.13
RTFDC1-202ENST00000357348 DCAF15Q66K64 600 aa14.27□□□□□ -0.13
RTFDC1-202ENST00000357348 MOB2Q70IA6 237 aa14.27□□□□□ -0.13
RTFDC1-202ENST00000357348 TRIML1Q8N9V2 468 aa14.27□□□□□ -0.13
RTFDC1-202ENST00000357348 NEK11Q8NG66 645 aa14.27□□□□□ -0.13
RTFDC1-202ENST00000357348 KCNJ14Q9UNX9 436 aa14.27□□□□□ -0.13
RTFDC1-202ENST00000357348 PITPNM2Q9BZ72 1349 aa14.27□□□□□ -0.13
RTFDC1-202ENST00000357348 PALM3A6NDB9 673 aaPredicted RBP14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 ASNSP08243 561 aa14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 TRIM29Q14134 588 aa14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 NR1I3Q14994 352 aa14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 CT47A1Q5JQC4 288 aaPredicted RBP14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 KIAA1755Q5JYT7 1200 aa14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 SLFN13Q68D06 897 aa14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 KRI1Q8N9T8 703 aaKnown RBP14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 PANX2Q96RD6 677 aa14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 ZNF341Q9BYN7 854 aa14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 ZNF408Q9H9D4 720 aa14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 NMRK2Q9NPI5 230 aa14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 FEZ2Q9UHY8 353 aaPredicted RBP14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 DACH1Q9UI36 760 aa14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 HOOK1Q9UJC3 728 aaKnown RBP14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 SLC1A4P43007 532 aa14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 TUBB2AQ13885 445 aa14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 PPP2R5BQ15173 497 aa14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 SUPT20HL1Q3ZLR7 823 aa14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 SPATA20Q8TB22 786 aa14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 GPKOWQ92917 476 aaPredicted RBP eCLIP14.26□□□□□ -0.138e-6■■□□□ 13.6
RTFDC1-202ENST00000357348 DHX58Q96C10 678 aa14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 MED15Q96RN5 788 aa14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 TUBB2BQ9BVA1 445 aa14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 ARHGEF10LQ9HCE6 1279 aa14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 VPS54Q9P1Q0 977 aa14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 RAB21Q9UL25 225 aa14.26□□□□□ -0.13
RTFDC1-202ENST00000357348 A0A1B0GTH6 734 aa14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 DEXIO95424 95 aa14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 NDUFB10O96000 172 aa14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 TUBB4BP68371 445 aa14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 TTLL12Q14166 644 aaPredicted RBP14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 PKN1Q16512 942 aa14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 LONRF2Q1L5Z9 754 aa14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 MSANTD4Q8NCY6 345 aa14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 RNF26Q9BY78 433 aaPredicted RBP14.25□□□□□ -0.13
RTFDC1-202ENST00000357348 ZCCHC17Q9NP64 241 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms