RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 KIF11P52732 1056 aa17.08■□□□□ 0.32
TRAPPC11-202ENST00000357207 SLC7A5Q01650 507 aa17.08■□□□□ 0.32
TRAPPC11-202ENST00000357207 IQCB1Q15051 598 aa17.08■□□□□ 0.32
TRAPPC11-202ENST00000357207 LRRC41Q15345 812 aa17.08■□□□□ 0.32
TRAPPC11-202ENST00000357207 MCTP2Q6DN12 878 aa17.08■□□□□ 0.32
TRAPPC11-202ENST00000357207 ARMCX5Q6P1M9 558 aa17.08■□□□□ 0.32
TRAPPC11-202ENST00000357207 ARMC9Q7Z3E5 817 aa17.08■□□□□ 0.32
TRAPPC11-202ENST00000357207 DHX40Q8IX18 779 aaKnown RBP17.08■□□□□ 0.32
TRAPPC11-202ENST00000357207 SLFN12Q8IYM2 578 aa17.08■□□□□ 0.32
TRAPPC11-202ENST00000357207 WHAMMQ8TF30 809 aa17.08■□□□□ 0.32
TRAPPC11-202ENST00000357207 GRK7Q8WTQ7 553 aa17.08■□□□□ 0.32
TRAPPC11-202ENST00000357207 KIAA1024Q9UPX6 916 aa17.08■□□□□ 0.32
TRAPPC11-202ENST00000357207 ADGRG1Q9Y653 693 aa17.08■□□□□ 0.32
TRAPPC11-202ENST00000357207 PASKQ96RG2 1323 aa17.08■□□□□ 0.32
TRAPPC11-202ENST00000357207 E2F5Q15329 346 aa17.08■□□□□ 0.32
TRAPPC11-202ENST00000357207 MUM1Q2TAK8 710 aa17.08■□□□□ 0.32
TRAPPC11-202ENST00000357207 LCORLQ8N3X6 602 aa17.08■□□□□ 0.32
TRAPPC11-202ENST00000357207 TYW1Q9NV66 732 aaKnown RBP17.08■□□□□ 0.32
TRAPPC11-202ENST00000357207 FRMPD2Q68DX3 1309 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC11-202ENST00000357207 PCDHA13Q9Y5I0 950 aa17.07■□□□□ 0.32
TRAPPC11-202ENST00000357207 CD19P15391 556 aa17.07■□□□□ 0.32
TRAPPC11-202ENST00000357207 DHX9Q08211 1270 aaKnown RBP17.07■□□□□ 0.32
TRAPPC11-202ENST00000357207 TSGA10IPQ3SY00 556 aa17.07■□□□□ 0.32
TRAPPC11-202ENST00000357207 MFSD14BQ5SR56 506 aa17.07■□□□□ 0.32
TRAPPC11-202ENST00000357207 ZNF579Q8NAF0 562 aaKnown RBP17.07■□□□□ 0.32
TRAPPC11-202ENST00000357207 NDST4Q9H3R1 872 aa17.07■□□□□ 0.32
TRAPPC11-202ENST00000357207 LARSQ9P2J5 1176 aaKnown RBP17.07■□□□□ 0.32
TRAPPC11-202ENST00000357207 STK17AQ9UEE5 414 aa17.07■□□□□ 0.32
TRAPPC11-202ENST00000357207 ARL6IP4Q66PJ3 421 aaKnown RBP17.07■□□□□ 0.32
TRAPPC11-202ENST00000357207 TRIM68Q6AZZ1 485 aa17.07■□□□□ 0.32
TRAPPC11-202ENST00000357207 PHLDB3Q6NSJ2 640 aa17.07■□□□□ 0.32
TRAPPC11-202ENST00000357207 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.07■□□□□ 0.32
TRAPPC11-202ENST00000357207 ODF2LQ9ULJ1 636 aa17.07■□□□□ 0.32
TRAPPC11-202ENST00000357207 CCDC89Q8N998 374 aa17.07■□□□□ 0.32
TRAPPC11-202ENST00000357207 NEO1Q92859 1461 aa17.07■□□□□ 0.32
TRAPPC11-202ENST00000357207 PNPLA6Q8IY17 1366 aa17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 H7C1W4 665 aa17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 LMNB1P20700 586 aa17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 PLTPP55058 493 aa17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 ZYXQ15942 572 aaKnown RBP17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 ABHD10Q9NUJ1 306 aa17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 GDAQ9Y2T3 454 aa17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 ROBO2Q9HCK4 1378 aa17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 NOL3O60936 208 aaKnown RBP17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 N4BP1O75113 896 aaKnown RBP17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 TADA3O75528 432 aa17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 TADA2BQ86TJ2 420 aa17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 CTAGE3PQ8IX95 158 aa17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 LRRC47Q8N1G4 583 aaKnown RBP17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 RAB3IL1Q8TBN0 382 aa17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 STAG1Q8WVM7 1258 aa17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 RILPQ96NA2 401 aa17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 STRBPQ96SI9 672 aaKnown RBP17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 TXNDC9O14530 226 aa17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 TRIM37O94972 964 aa17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 MYCLP12524 364 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 TCP10Q12799 353 aa17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 PPM1KQ8N3J5 372 aa17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 RPAP1Q9BWH6 1393 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 TARBP1Q13395 1621 aaKnown RBP17.06■□□□□ 0.32
TRAPPC11-202ENST00000357207 EIF3CLB5ME19 914 aaKnown RBP17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 ANKRD7Q92527 254 aa17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 PBKQ96KB5 322 aa17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 EIF3CQ99613 913 aaKnown RBP17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 PLEKHG1Q9ULL1 1385 aa17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 RPSAP08865 295 aaKnown RBP17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 TNNI1P19237 187 aa17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 E4F1Q66K89 784 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 CPXCR1Q8N123 301 aa17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 MIPOL1Q8TD10 442 aa17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 CCNL1Q9UK58 526 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 DYNLL1P63167 89 aaKnown RBP17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 CYP4A11Q02928 519 aa17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 MESDQ14696 234 aa17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 MMS22LQ6ZRQ5 1243 aa17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 ZNF354CQ86Y25 554 aa17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 JPH2Q9BR39 696 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 ACTR5Q9H9F9 607 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 PIH1D3Q9NQM4 214 aaKnown RBP17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 YEATS2Q9ULM3 1422 aa17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 PALM2Q8IXS6 379 aa17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 TBCKQ8TEA7 893 aa17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 NFU1Q9UMS0 254 aa17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 NOVA2Q9UNW9 492 aaKnown RBP17.05■□□□□ 0.32
TRAPPC11-202ENST00000357207 ANO9A1A5B4 782 aa17.04■□□□□ 0.32
TRAPPC11-202ENST00000357207 HMGB1P1B2RPK0 211 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC11-202ENST00000357207 PLCG1P19174 1290 aa17.04■□□□□ 0.32
TRAPPC11-202ENST00000357207 CASP1P29466 404 aa17.04■□□□□ 0.32
TRAPPC11-202ENST00000357207 KCNJ6P48051 423 aa17.04■□□□□ 0.32
TRAPPC11-202ENST00000357207 CCZ1BP86790 482 aa17.04■□□□□ 0.32
TRAPPC11-202ENST00000357207 CCZ1P86791 482 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC11-202ENST00000357207 PDCLQ13371 301 aa17.04■□□□□ 0.32
TRAPPC11-202ENST00000357207 ICE2Q659A1 982 aa17.04■□□□□ 0.32
TRAPPC11-202ENST00000357207 KLHL29Q96CT2 875 aa17.04■□□□□ 0.32
TRAPPC11-202ENST00000357207 DDIT3P35638 169 aa17.04■□□□□ 0.32
TRAPPC11-202ENST00000357207 HIBCHQ6NVY1 386 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC11-202ENST00000357207 FAM133AQ8N9E0 248 aa17.04■□□□□ 0.32
TRAPPC11-202ENST00000357207 GBP5Q96PP8 586 aa17.04■□□□□ 0.32
TRAPPC11-202ENST00000357207 DISC1Q9NRI5 854 aa17.04■□□□□ 0.32
TRAPPC11-202ENST00000357207 ATF2P15336 505 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms